FFCP PHASE1:Mm9::chr15:95359008..95359071,-: Difference between revisions
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{{FFCP|EntrezGene=54003|HGNC=|MCL_coexpression_id=13|UniProt=Q8BM06|association_with_transcript=-18bp_to_ENSMUST00000023090_5end|description=CAGE_peak_3_at_Nell2_5end|id=chr15:95359008..95359071,-|ontology_enrichment_celltype=CL:0000540!1.95e-18!33;CL:0000047!1.95e-18!33;CL:0000031!1.95e-18!33;CL:0000404!1.95e-18!33;CL:0000221!1.15e-15!44;CL:0000133!1.15e-15!44;CL:0002319!1.20e-15!43;CL:0000117!1.94e-15!23;CL:0000337!1.94e-15!23;CL:0000393!3.71e-14!39;CL:0000211!3.71e-14!39;CL:0000055!6.88e-12!50|ontology_enrichment_celltype_v019_2=CL:0000540,1.63e-23,33;CL:0000047,1.63e-23,33;CL:0000031,1.63e-23,33;CL:0000404,1.63e-23,33;CL:0000117,2.22e-20,23;CL:0000337,2.22e-20,23;CL:0002319,1.37e-18,43;CL:0000393,5.42e-18,39;CL:0000211,5.42e-18,39;CL:0000221,7.14e-18,44;CL:0000133,7.14e-18,44;CL:0002321,5.88e-07,70;CL:0002609,6.85e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.42e-37!73;UBERON:0005743!4.42e-37!73;UBERON:0000073!4.86e-35!75;UBERON:0001016!4.86e-35!75;UBERON:0002346!3.06e-30!71;UBERON:0003075!3.06e-30!71;UBERON:0007284!3.06e-30!71;UBERON:0004121!2.19e-29!102;UBERON:0000924!2.19e-29!102;UBERON:0006601!2.19e-29!102;UBERON:0001049!1.12e-28!52;UBERON:0005068!1.12e-28!52;UBERON:0006241!1.12e-28!52;UBERON:0007135!1.12e-28!52;UBERON:0000033!6.25e-27!63;UBERON:0000955!7.71e-27!50;UBERON:0006238!7.71e-27!50;UBERON:0002616!2.86e-26!49;UBERON:0003056!3.22e-23!49;UBERON:0002020!2.22e-21!34;UBERON:0003080!2.51e-21!40;UBERON:0002780!9.94e-21!39;UBERON:0001890!9.94e-21!39;UBERON:0006240!9.94e-21!39;UBERON:0002791!6.85e-18!29;UBERON:0003528!6.85e-18!29;UBERON:0001893!6.85e-18!29;UBERON:0007811!4.37e-15!86;UBERON:0000153!1.36e-14!94;UBERON:0000956!4.83e-13!21;UBERON:0001869!4.83e-13!21;UBERON:0000203!4.83e-13!21;UBERON:0002619!2.80e-10!17;UBERON:0002021!2.13e-08!10;UBERON:0000411!2.13e-08!10;UBERON:0001950!2.13e-08!10;UBERON:0003076!9.18e-08!12;UBERON:0003057!9.18e-08!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.34e-44,73;UBERON:0001016,2.95e-42,75;UBERON:0002346,1.05e-38,64;UBERON:0003075,1.05e-38,64;UBERON:0007284,1.05e-38,64;UBERON:0004121,7.45e-37,95;UBERON:0000924,7.45e-37,95;UBERON:0006601,7.45e-37,95;UBERON:0000073,3.69e-36,54;UBERON:0001049,2.33e-34,52;UBERON:0005068,2.33e-34,52;UBERON:0006241,2.33e-34,52;UBERON:0007135,2.33e-34,52;UBERON:0010371,3.13e-31,73;UBERON:0000955,1.79e-29,47;UBERON:0006238,1.79e-29,47;UBERON:0002616,9.98e-29,46;UBERON:0002020,6.39e-28,34;UBERON:0003056,1.62e-27,49;UBERON:0003080,1.16e-25,40;UBERON:0002780,7.30e-25,39;UBERON:0001890,7.30e-25,39;UBERON:0006240,7.30e-25,39;UBERON:0003528,3.44e-23,29;UBERON:0002791,3.44e-23,29;UBERON:0001893,3.44e-23,29;UBERON:0010314,3.32e-21,92;UBERON:0000956,1.28e-16,21;UBERON:0001869,1.28e-16,21;UBERON:0000203,1.28e-16,21;UBERON:0002619,6.84e-13,17;UBERON:0002021,7.80e-11,10;UBERON:0000411,7.80e-11,10;UBERON:0001950,7.80e-11,10;UBERON:0003076,7.35e-09,12;UBERON:0003057,7.35e-09,12;UBERON:0002420,1.10e-07,8;UBERON:0007245,1.10e-07,8;UBERON:0010009,1.10e-07,8;UBERON:0010011,1.10e-07,8;UBERON:0000454,1.10e-07,8|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,0.782391344348039,3.48840250208714,0,0.388859798148567,1.1198913730029,0,0,0,0,0,0.286533439938757,0,14.1621522601718,13.7537654610729,6.33831403506179,0,0,0,0.988866362566974,0,2.39680088414724,0.768436610643109,15.4497522339632,16.4707244764663,19.5602214056785,19.4242669394586,13.693849539,14.9438775042244,16.3895755441184,8.27296907949019,6.60695285996332,8.04430229936683,6.14426133024974,16.6176722540044,11.9848813119157,13.022834263919,3.62937898701795,5.06486349028512,5.19514042441154,14.142172102736,11.5321061447273,14.911955666024,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.563373679106722,0,0,0,0,0,0,0.34255163915718,0,0,1.21439728736295,0.608930956624282,0.230615497256059,0.301445281105245,0.23517741427141,0,0,0,0,0.161766849947409,0,0,0,9.36898550436951,18.431310199584,0,0,0,0,7.78911324905078,8.23501085073528,32.7957859014576,14.0797699355744,11.5071955798649,6.2336413367868,11.0324058886075,0.203678727700633,0,0,0.420883711772948,1.04096354370163,2.98872735763515,2.52086981727489,1.80845781402858,2.17716797284249,1.15302348256365,1.68663104207512,1.03481348295606,0.215567992932842,0.378212160335639,0.879755620819744,0.657587197282725,0,0.696504333044333,0.205782136407943,0.59710280045548,0,0,0,0.207125772535502,0.234526059981096,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,21.0289948564127,18.0083071663748,0,0,0.853153002140936,1.85789337488351,0.77320476793256,1.00841762311671,0.444756087689741,0,0,0,0.251335208800269,0,0,0,0.216138049874694,0,0.569003702859245,0.456994050438915,0,0.814605311381257,0.581857461502877,0.350679099451593,0.252946148497029,0.147610147979602,0,0,0,0.333690211432188,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0,0,0.234690248288502,0,0,0,0.157635144106191,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,4.33486592967038,5.39173758324135,0,0,4.10160685241134,2.73307121007647,5.81643173878557,1.67278158566786,2.00518806674155,2.83076530788832,2.42886421004937,2.04579100537918,3.55759000151871,4.4984984299053,0,0.178065603667255,0.162886959353576,0,0,0.485561272309963,0.302323556964751,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,1.02131881726136,0.900305470156551,0.646793418913773,1.50035924522115,2.30542303734956,2.67553226403106,2.13913726782757,3.34911444026059,0,0,0,0,0.161464426695906,0.180938774784468,0,0,0,3.8939313422207,0,1.65109494370578,0.555583582109135,0.376736914009382,0,0.228778173206523,0,0,0,0,1.10717597753397,0.609958401380546,0.540026704109006,0.418176592028937,0.218362563746178,0.134864346384821,0.247960367176008,0,0,0,0,0.598066184175915,0.496375471371293,0.583353565032143,0.387479470433193,0.168956125490778,0.234714477291508,0.13020438484395,0.314578033277133,0,0,0,0.608175645870493,0.205421914329655,0,0.179026695667481,0.39736270956253,0,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,21.4605700194485,17.0320337507655,16.6139698897425,20.1068223342114,17.1270629942661,18.8848474347425,17.550585006027,10.8077088773813,14.5005570874945,13.4617681055473,0.726511433089237,1.99512436700516,3.24393850932855,0.486213434136588,1.46729213839588,0.551530525350042,1.55572709461131,1.85431551515005,2.24643446714271,3.28506375292937,2.28131369901216,1.88626341386076,1.49826411951812,2.04880487695582,2.12511235135769,2.38146845641537,2.78122382267653,2.70072908649187,2.47251540481984,2.35518272215036,0.685738504770831,2.8396128985494,2.86123427936785,1.88950341622027,1.97629698872194,2.28459441307527,2.74391959309159,3.41990624869196,2.58027816307137,2.80571135828869,1.89816028998679,2.46261205938909,2.45538625901814,2.94379998253335,2.3148793317737,4.24677982494508,2.33931608445408,1.71896843238639,0.765153328275374,1.10295709559758,0.231867835620421|short_description=p3@Nell2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:54003 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BM06 | |||
|association_with_transcript=-18bp_to_ENSMUST00000023090_5end | |||
|cluster_id=chr15:95359008..95359071,- | |||
|description=CAGE_peak_3_at_Nell2_5end | |||
|id=chr15:95359008..95359071,- | |||
|ontology_enrichment_celltype=CL:0000540!1.95e-18!33;CL:0000047!1.95e-18!33;CL:0000031!1.95e-18!33;CL:0000404!1.95e-18!33;CL:0000221!1.15e-15!44;CL:0000133!1.15e-15!44;CL:0002319!1.20e-15!43;CL:0000117!1.94e-15!23;CL:0000337!1.94e-15!23;CL:0000393!3.71e-14!39;CL:0000211!3.71e-14!39;CL:0000055!6.88e-12!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.63e-23,33;CL:0000047,1.63e-23,33;CL:0000031,1.63e-23,33;CL:0000404,1.63e-23,33;CL:0000117,2.22e-20,23;CL:0000337,2.22e-20,23;CL:0002319,1.37e-18,43;CL:0000393,5.42e-18,39;CL:0000211,5.42e-18,39;CL:0000221,7.14e-18,44;CL:0000133,7.14e-18,44;CL:0002321,5.88e-07,70;CL:0002609,6.85e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.42e-37!73;UBERON:0005743!4.42e-37!73;UBERON:0000073!4.86e-35!75;UBERON:0001016!4.86e-35!75;UBERON:0002346!3.06e-30!71;UBERON:0003075!3.06e-30!71;UBERON:0007284!3.06e-30!71;UBERON:0004121!2.19e-29!102;UBERON:0000924!2.19e-29!102;UBERON:0006601!2.19e-29!102;UBERON:0001049!1.12e-28!52;UBERON:0005068!1.12e-28!52;UBERON:0006241!1.12e-28!52;UBERON:0007135!1.12e-28!52;UBERON:0000033!6.25e-27!63;UBERON:0000955!7.71e-27!50;UBERON:0006238!7.71e-27!50;UBERON:0002616!2.86e-26!49;UBERON:0003056!3.22e-23!49;UBERON:0002020!2.22e-21!34;UBERON:0003080!2.51e-21!40;UBERON:0002780!9.94e-21!39;UBERON:0001890!9.94e-21!39;UBERON:0006240!9.94e-21!39;UBERON:0002791!6.85e-18!29;UBERON:0003528!6.85e-18!29;UBERON:0001893!6.85e-18!29;UBERON:0007811!4.37e-15!86;UBERON:0000153!1.36e-14!94;UBERON:0000956!4.83e-13!21;UBERON:0001869!4.83e-13!21;UBERON:0000203!4.83e-13!21;UBERON:0002619!2.80e-10!17;UBERON:0002021!2.13e-08!10;UBERON:0000411!2.13e-08!10;UBERON:0001950!2.13e-08!10;UBERON:0003076!9.18e-08!12;UBERON:0003057!9.18e-08!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.34e-44,73;UBERON:0001016,2.95e-42,75;UBERON:0002346,1.05e-38,64;UBERON:0003075,1.05e-38,64;UBERON:0007284,1.05e-38,64;UBERON:0004121,7.45e-37,95;UBERON:0000924,7.45e-37,95;UBERON:0006601,7.45e-37,95;UBERON:0000073,3.69e-36,54;UBERON:0001049,2.33e-34,52;UBERON:0005068,2.33e-34,52;UBERON:0006241,2.33e-34,52;UBERON:0007135,2.33e-34,52;UBERON:0010371,3.13e-31,73;UBERON:0000955,1.79e-29,47;UBERON:0006238,1.79e-29,47;UBERON:0002616,9.98e-29,46;UBERON:0002020,6.39e-28,34;UBERON:0003056,1.62e-27,49;UBERON:0003080,1.16e-25,40;UBERON:0002780,7.30e-25,39;UBERON:0001890,7.30e-25,39;UBERON:0006240,7.30e-25,39;UBERON:0003528,3.44e-23,29;UBERON:0002791,3.44e-23,29;UBERON:0001893,3.44e-23,29;UBERON:0010314,3.32e-21,92;UBERON:0000956,1.28e-16,21;UBERON:0001869,1.28e-16,21;UBERON:0000203,1.28e-16,21;UBERON:0002619,6.84e-13,17;UBERON:0002021,7.80e-11,10;UBERON:0000411,7.80e-11,10;UBERON:0001950,7.80e-11,10;UBERON:0003076,7.35e-09,12;UBERON:0003057,7.35e-09,12;UBERON:0002420,1.10e-07,8;UBERON:0007245,1.10e-07,8;UBERON:0010009,1.10e-07,8;UBERON:0010011,1.10e-07,8;UBERON:0000454,1.10e-07,8 | |||
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|short_description=p3@Nell2 | |||
}} |
Revision as of 21:32, 5 August 2015
Short description: | p3@Nell2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Nell2_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -18bp_to_ENSMUST00000023090_5end |
EntrezGene: | 54003 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.63e-23 | 33 |
neuronal stem cell | 1.63e-23 | 33 |
neuroblast | 1.63e-23 | 33 |
electrically signaling cell | 1.63e-23 | 33 |
CNS neuron (sensu Vertebrata) | 2.22e-20 | 23 |
neuroblast (sensu Vertebrata) | 2.22e-20 | 23 |
neural cell | 1.37e-18 | 43 |
electrically responsive cell | 5.42e-18 | 39 |
electrically active cell | 5.42e-18 | 39 |
ectodermal cell | 7.14e-18 | 44 |
neurectodermal cell | 7.14e-18 | 44 |
embryonic cell | 5.88e-07 | 70 |
neuron of cerebral cortex | 6.85e-07 | 6 |