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FFCP PHASE1:Mm9::chr16:28446864..28446920,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=93
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr16:28446864..28446920,-
|description=CAGE_peak_at_chr16:28446864..28446920,-
|description=CAGE_peak_at_chr16:28446864..28446920,-
|id=chr16:28446864..28446920,-
|id=chr16:28446864..28446920,-
|ontology_enrichment_celltype=CL:0000117!6.58e-13!23;CL:0000337!6.58e-13!23;CL:0000540!1.48e-08!33;CL:0000047!1.48e-08!33;CL:0000031!1.48e-08!33;CL:0000404!1.48e-08!33;CL:0002319!2.49e-08!43;CL:0000221!2.84e-08!44;CL:0000133!2.84e-08!44
|ontology_enrichment_celltype=CL:0000117!6.58e-13!23;CL:0000337!6.58e-13!23;CL:0000540!1.48e-08!33;CL:0000047!1.48e-08!33;CL:0000031!1.48e-08!33;CL:0000404!1.48e-08!33;CL:0002319!2.49e-08!43;CL:0000221!2.84e-08!44;CL:0000133!2.84e-08!44
|ontology_enrichment_celltype_v019_2=CL:0000117,7.46e-20,23;CL:0000337,7.46e-20,23;CL:0000540,1.39e-11,33;CL:0000047,1.39e-11,33;CL:0000031,1.39e-11,33;CL:0000404,1.39e-11,33;CL:0000393,9.55e-09,39;CL:0000211,9.55e-09,39;CL:0002319,9.73e-09,43;CL:0000221,2.22e-08,44;CL:0000133,2.22e-08,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!8.79e-28!63;UBERON:0001049!7.19e-27!52;UBERON:0005068!7.19e-27!52;UBERON:0006241!7.19e-27!52;UBERON:0007135!7.19e-27!52;UBERON:0001017!5.50e-26!73;UBERON:0005743!5.50e-26!73;UBERON:0000955!1.02e-25!50;UBERON:0006238!1.02e-25!50;UBERON:0002346!1.26e-25!71;UBERON:0003075!1.26e-25!71;UBERON:0007284!1.26e-25!71;UBERON:0000073!6.85e-25!75;UBERON:0001016!6.85e-25!75;UBERON:0002616!7.17e-25!49;UBERON:0003056!1.44e-23!49;UBERON:0004121!2.01e-21!102;UBERON:0000924!2.01e-21!102;UBERON:0006601!2.01e-21!102;UBERON:0002020!3.48e-20!34;UBERON:0003080!1.11e-19!40;UBERON:0002780!5.30e-19!39;UBERON:0001890!5.30e-19!39;UBERON:0006240!5.30e-19!39;UBERON:0002791!5.42e-17!29;UBERON:0003528!5.42e-17!29;UBERON:0001893!5.42e-17!29;UBERON:0000153!1.28e-15!94;UBERON:0007811!7.54e-15!86;UBERON:0000956!2.51e-12!21;UBERON:0001869!2.51e-12!21;UBERON:0000203!2.51e-12!21;UBERON:0002619!7.65e-11!17;UBERON:0002021!1.64e-08!10;UBERON:0000411!1.64e-08!10;UBERON:0001950!1.64e-08!10;UBERON:0003076!1.10e-07!12;UBERON:0003057!1.10e-07!12;UBERON:0000475!1.46e-07!200;UBERON:0000025!6.03e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.87e-35,54;UBERON:0002346,1.04e-34,64;UBERON:0003075,1.04e-34,64;UBERON:0007284,1.04e-34,64;UBERON:0001049,3.02e-33,52;UBERON:0005068,3.02e-33,52;UBERON:0006241,3.02e-33,52;UBERON:0007135,3.02e-33,52;UBERON:0002020,4.99e-30,34;UBERON:0001017,1.12e-29,73;UBERON:0001016,1.99e-28,75;UBERON:0010371,2.54e-28,73;UBERON:0000955,2.95e-28,47;UBERON:0006238,2.95e-28,47;UBERON:0003056,4.41e-27,49;UBERON:0002616,5.13e-27,46;UBERON:0004121,7.41e-27,95;UBERON:0000924,7.41e-27,95;UBERON:0006601,7.41e-27,95;UBERON:0003528,6.70e-25,29;UBERON:0002791,6.70e-25,29;UBERON:0001893,6.70e-25,29;UBERON:0003080,2.26e-23,40;UBERON:0002780,2.39e-22,39;UBERON:0001890,2.39e-22,39;UBERON:0006240,2.39e-22,39;UBERON:0010314,4.86e-19,92;UBERON:0000956,2.06e-17,21;UBERON:0001869,2.06e-17,21;UBERON:0000203,2.06e-17,21;UBERON:0002619,5.52e-15,17;UBERON:0002021,9.12e-13,10;UBERON:0000411,9.12e-13,10;UBERON:0001950,9.12e-13,10;UBERON:0003076,3.81e-10,12;UBERON:0003057,3.81e-10,12;UBERON:0000025,4.35e-10,114;UBERON:0002420,1.39e-08,8;UBERON:0007245,1.39e-08,8;UBERON:0010009,1.39e-08,8;UBERON:0010011,1.39e-08,8;UBERON:0000454,1.39e-08,8;UBERON:0004111,1.56e-08,122;UBERON:0002240,3.21e-07,6;UBERON:0005174,3.21e-07,6;UBERON:0001137,3.21e-07,6
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0.782391344348039,1.09012578190223,1.09843091367236,0.972149495371417,0.55994568650145,0,0,0,0,0,0,0,2.42779753031517,3.1739458756322,3.80298842103708,0,0,0,0,0,0.299600110518405,0.768436610643109,1.45165457231869,1.35005938331691,1.05162480675691,4.85606673486466,5.74258206474195,2.20483438586917,1.53352753629178,1.83843757322004,6.60695285996332,4.85211884723713,4.45458946443106,2.90149833006426,2.28719109006024,3.12548022334056,4.4669279840221,3.93933827022176,4.43114918552749,5.59794312399969,3.41692033917847,2.98239113320481,0,0.151143120213571,0.869593466105033,0,0,0,0,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,0,0,0,0.5709193985953,0,0,0.173485326766136,0,0,0.301445281105245,0.23517741427141,0,0,0,0,0,0,0,0,3.51336956413857,6.28340120440365,0,0,0,0,5.09288173976397,5.94750783664214,5.52879149296603,6.77914848749878,7.41574826257959,8.93488591606108,6.65189178577806,2.34230536855727,1.7416975885413,2.77995034277042,0.841767423545896,0.910843100738926,1.60931473103431,1.80062129805349,2.71268672104287,2.38127747029647,2.69038812598185,2.52994656311268,2.06962696591213,0.431135985865684,0.378212160335639,2.28736461413134,2.41115305670332,0.556094498451196,0.696504333044333,0.205782136407943,0.59710280045548,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.83666881697493,1.85228302282712,0,0,0.639864751605702,0,0,0.201683524623343,0,0,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0.569003702859245,0.571242563048644,0,0.203651327845314,0.387904974335251,0.350679099451593,0.948548056863859,0.147610147979602,0.156998727841375,0.370191491765402,0,0.166845105716094,0,0,0.202860121388503,0,0.25462585178142,0,0.162135226775035,0,0,0,0.936113019343682,0.252578877947112,0.538192240565737,0.482443521363367,0,0,0,0.169745085775188,0,0.335012514883631,0.476087281772027,0,0.788175720530955,0.664394068946325,1.59454768657487,0.163863314715738,0,0.144649058581512,0,0,0,0,5.9403718295483,4.45404409050372,0,0,0.315508219416257,0.780877488593277,0,0.238968797952552,0,0,0,0,0.395287777946524,58.4804795887689,0.567760340833074,0.534196811001766,0.488660878060728,0.659880491890142,0,0.728341908464944,0.302323556964751,1.32023555829129,0.295301892880773,1.22974059177571,1.80899805217755,2.18120237686503,3.20847640546249,0.948110273807448,2.10837217149998,0,0.340439605753788,0.900305470156551,0.905510786479282,1.92903331528433,1.24138163549592,0.535106452806212,0.658196082408484,0.304464949114599,0,0,0,0.16488625294148,0,0.241251699712623,0.119372344003136,0.328281799490123,0,5.00648315428376,0,0.206386867963223,0,0,0.136694227721025,0,0,0,0,0,0.158167996790568,0.813277868507395,0.324016022465404,0.836353184057875,0.655087691238533,0.269728692769641,0.330613822901344,0,0.129614973291793,0,0,0,0,0.194451188344048,0,0.506868376472335,0.117357238645754,0.651021924219751,0.104859344425711,0,0.288030006257865,0,1.41907650703115,0.718976700153791,0.129920822977795,0,0.198681354781265,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0.375364950902364,1.28206136987086,0.428736758158132,0,9.60078132449013,6.90487854760765,10.3121192419091,7.73339320546594,8.22099023724771,6.7985450765073,4.72515750162264,7.20513925158753,6.79713613476307,4.65984280576638,0.518936737920883,0.798049746802062,1.19513524027894,0.729320151204882,1.46729213839588,1.2869045591501,0.666740183404846,0.618105171716683,0.64183841918363,1.01078884705519,0.760437899670719,0.377252682772152,0.468207537349412,0.576226371643824,1.20614484806788,1.90517476513229,0.927074607558844,0.38581844092741,2.47251540481984,0.735994600671987,1.02860775715625,0.887379030796687,0.715308569841963,1.30811774969096,1.12931256498397,1.4384483341585,1.64635175585495,0.263069711437843,0.407412341537585,1.68342681497322,0.711810108745045,1.28055827088233,1.22769312950907,1.39443157067369,2.3148793317737,1.99848462350357,0.935726433781634,0.429742108096597,0.956441660344217,0,0.231867835620421
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0.782391344348039,1.09012578190223,1.09843091367236,0.972149495371417,0.55994568650145,0,0,0,0,0,0,0,2.42779753031517,3.1739458756322,3.80298842103708,0,0,0,0,0,0.299600110518405,0.768436610643109,1.45165457231869,1.35005938331691,1.05162480675691,4.85606673486466,5.74258206474195,2.20483438586917,1.53352753629178,1.83843757322004,6.60695285996332,4.85211884723713,4.45458946443106,2.90149833006426,2.28719109006024,3.12548022334056,4.4669279840221,3.93933827022176,4.43114918552749,5.59794312399969,3.41692033917847,2.98239113320481,0,0.151143120213571,0.869593466105033,0,0,0,0,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,0,0,0,0.5709193985953,0,0,0.173485326766136,0,0,0.301445281105245,0.23517741427141,0,0,0,0,0,0,0,0,3.51336956413857,6.28340120440365,0,0,0,0,5.09288173976397,5.94750783664214,5.52879149296603,6.77914848749878,7.41574826257959,8.93488591606108,6.65189178577806,2.34230536855727,1.7416975885413,2.77995034277042,0.841767423545896,0.910843100738926,1.60931473103431,1.80062129805349,2.71268672104287,2.38127747029647,2.69038812598185,2.52994656311268,2.06962696591213,0.431135985865684,0.378212160335639,2.28736461413134,2.41115305670332,0.556094498451196,0.696504333044333,0.205782136407943,0.59710280045548,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.83666881697493,1.85228302282712,0,0,0.639864751605702,0,0,0.201683524623343,0,0,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0.569003702859245,0.571242563048644,0,0.203651327845314,0.387904974335251,0.350679099451593,0.948548056863859,0.147610147979602,0.156998727841375,0.370191491765402,0,0.166845105716094,0,0,0.202860121388503,0,0.25462585178142,0,0.162135226775035,0,0,0,0.936113019343682,0.252578877947112,0.538192240565737,0.482443521363367,0,0,0,0.169745085775188,0,0.335012514883631,0.476087281772027,0,0.788175720530955,0.664394068946325,1.59454768657487,0.163863314715738,0,0.144649058581512,0,0,0,0,5.9403718295483,4.45404409050372,0,0,0.315508219416257,0.780877488593277,0,0.238968797952552,0,0,0,0,0.395287777946524,58.4804795887689,0.567760340833074,0.534196811001766,0.488660878060728,0.659880491890142,0,0.728341908464944,0.302323556964751,1.32023555829129,0.295301892880773,1.22974059177571,1.80899805217755,2.18120237686503,3.20847640546249,0.948110273807448,2.10837217149998,0,0.340439605753788,0.900305470156551,0.905510786479282,1.92903331528433,1.24138163549592,0.535106452806212,0.658196082408484,0.304464949114599,0,0,0,0.16488625294148,0,0.241251699712623,0.119372344003136,0.328281799490123,0,5.00648315428376,0,0.206386867963223,0,0,0.136694227721025,0,0,0,0,0,0.158167996790568,0.813277868507395,0.324016022465404,0.836353184057875,0.655087691238533,0.269728692769641,0.330613822901344,0,0.129614973291793,0,0,0,0,0.194451188344048,0,0.506868376472335,0.117357238645754,0.651021924219751,0.104859344425711,0,0.288030006257865,0,1.41907650703115,0.718976700153791,0.129920822977795,0,0.198681354781265,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0.375364950902364,1.28206136987086,0.428736758158132,0,9.60078132449013,6.90487854760765,10.3121192419091,7.73339320546594,8.22099023724771,6.7985450765073,4.72515750162264,7.20513925158753,6.79713613476307,4.65984280576638,0.518936737920883,0.798049746802062,1.19513524027894,0.729320151204882,1.46729213839588,1.2869045591501,0.666740183404846,0.618105171716683,0.64183841918363,1.01078884705519,0.760437899670719,0.377252682772152,0.468207537349412,0.576226371643824,1.20614484806788,1.90517476513229,0.927074607558844,0.38581844092741,2.47251540481984,0.735994600671987,1.02860775715625,0.887379030796687,0.715308569841963,1.30811774969096,1.12931256498397,1.4384483341585,1.64635175585495,0.263069711437843,0.407412341537585,1.68342681497322,0.711810108745045,1.28055827088233,1.22769312950907,1.39443157067369,2.3148793317737,1.99848462350357,0.935726433781634,0.429742108096597,0.956441660344217,0,0.231867835620421
|short_description=p@chr16:28446864..28446920,-
|short_description=p@chr16:28446864..28446920,-
}}
}}

Latest revision as of 06:34, 6 August 2015

Short description:p@chr16:28446864..28446920, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr16:28446864..28446920, -
Coexpression cluster:MCL_coexpression_mm9:93
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p@chr16:28446864..28446920-

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.43
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.45
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.74
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.20
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.53
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.85
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.90
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.29
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.47
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.43
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.60
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.98
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.51
cerebellum, neonate N30.CNhs11135.1395-42I26.28
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.09
corpus striatum, adult.CNhs10487.19-21D85.95
corpus striatum, neonate N00.CNhs11226.630-43F15.53
cortex, adult.CNhs10473.12-14D56.78
cortex, neonate N30.CNhs11107.1392-42F27.42
diencephalon, adult.CNhs10482.20-12F28.93
diencephalon, neonate N30.CNhs11201.1388-42B26.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.34
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.74
epididymis, adult.CNhs10490.58-23B22.78
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D42.71
eyeball, neonate N00.CNhs11207.633-15C62.38
eyeball, neonate N01.CNhs11140.1532-43E72.69
eyeball, neonate N02.CNhs11205.1551-44G82.53
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E22.29
forelimb, embryo E14.CNhs10577.413-26A82.41
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E84.84
hippocampus, neonate N00.CNhs11228.627-43G11.85
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.95
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E61.59
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C25.94
medulla oblongata, neonate N30.CNhs11200.1396-42A34.45
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I958.48
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D83.21
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C95.01
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.60
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.90
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.31
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.73
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.80
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.21
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F92.31
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)7.46e-2023
neuroblast (sensu Vertebrata)7.46e-2023
neuron1.39e-1133
neuronal stem cell1.39e-1133
neuroblast1.39e-1133
electrically signaling cell1.39e-1133
electrically responsive cell9.55e-0939
electrically active cell9.55e-0939
neural cell9.73e-0943
ectodermal cell2.22e-0844
neurectodermal cell2.22e-0844

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.87e-3554
neurectoderm1.04e-3464
neural plate1.04e-3464
presumptive neural plate1.04e-3464
neural tube3.02e-3352
neural rod3.02e-3352
future spinal cord3.02e-3352
neural keel3.02e-3352
gray matter4.99e-3034
central nervous system1.12e-2973
nervous system1.99e-2875
ecto-epithelium2.54e-2873
brain2.95e-2847
future brain2.95e-2847
pre-chordal neural plate4.41e-2749
regional part of brain5.13e-2746
ectoderm-derived structure7.41e-2795
ectoderm7.41e-2795
presumptive ectoderm7.41e-2795
brain grey matter6.70e-2529
regional part of telencephalon6.70e-2529
telencephalon6.70e-2529
anterior neural tube2.26e-2340
regional part of forebrain2.39e-2239
forebrain2.39e-2239
future forebrain2.39e-2239
structure with developmental contribution from neural crest4.86e-1992
cerebral cortex2.06e-1721
cerebral hemisphere2.06e-1721
pallium2.06e-1721
regional part of cerebral cortex5.52e-1517
occipital lobe9.12e-1310
visual cortex9.12e-1310
neocortex9.12e-1310
posterior neural tube3.81e-1012
chordal neural plate3.81e-1012
tube4.35e-10114
basal ganglion1.39e-088
nuclear complex of neuraxis1.39e-088
aggregate regional part of brain1.39e-088
collection of basal ganglia1.39e-088
cerebral subcortex1.39e-088
anatomical conduit1.56e-08122
spinal cord3.21e-076
dorsal region element3.21e-076
dorsum3.21e-076
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