FFCP PHASE1:Mm9::chr13:88961284..88961289,+: Difference between revisions
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{{FFCP|EntrezGene=13612|HGNC=|MCL_coexpression_id=1|UniProt=Q8C4U8|association_with_transcript=37bp_to_ENSMUST00000043111_5end|description=CAGE_peak_12_at_Edil3_5end|id=chr13:88961284..88961289,+|ontology_enrichment_celltype=CL:0000540!5.47e-10!33;CL:0000047!5.47e-10!33;CL:0000031!5.47e-10!33;CL:0000404!5.47e-10!33;CL:0000117!1.40e-08!23;CL:0000337!1.40e-08!23;CL:0002319!2.44e-08!43;CL:0000221!5.62e-08!44;CL:0000133!5.62e-08!44;CL:0000393!2.22e-07!39;CL:0000211!2.22e-07!39|ontology_enrichment_celltype_v019_2=CL:0002614,9.21e-12,3;CL:0002610,1.09e-11,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.14e-28!73;UBERON:0005743!6.14e-28!73;UBERON:0000073!6.46e-28!75;UBERON:0001016!6.46e-28!75;UBERON:0000955!1.26e-24!50;UBERON:0006238!1.26e-24!50;UBERON:0002616!9.18e-24!49;UBERON:0001049!1.03e-22!52;UBERON:0005068!1.03e-22!52;UBERON:0006241!1.03e-22!52;UBERON:0007135!1.03e-22!52;UBERON:0002346!2.34e-22!71;UBERON:0003075!2.34e-22!71;UBERON:0007284!2.34e-22!71;UBERON:0004121!3.35e-22!102;UBERON:0000924!3.35e-22!102;UBERON:0006601!3.35e-22!102;UBERON:0000033!1.16e-21!63;UBERON:0003080!7.23e-19!40;UBERON:0002780!7.95e-18!39;UBERON:0001890!7.95e-18!39;UBERON:0006240!7.95e-18!39;UBERON:0003056!3.47e-17!49;UBERON:0002020!5.19e-16!34;UBERON:0002791!2.19e-15!29;UBERON:0003528!2.19e-15!29;UBERON:0001893!2.19e-15!29;UBERON:0000153!1.77e-13!94;UBERON:0007811!7.61e-12!86;UBERON:0000956!1.98e-11!21;UBERON:0001869!1.98e-11!21;UBERON:0000203!1.98e-11!21;UBERON:0000025!5.32e-10!114;UBERON:0002021!4.12e-09!10;UBERON:0000411!4.12e-09!10;UBERON:0001950!4.12e-09!10;UBERON:0004111!5.87e-09!122;UBERON:0002619!1.24e-08!17;UBERON:0002298!1.19e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.55e-30,54;UBERON:0002616,3.50e-26,46;UBERON:0001049,1.30e-25,52;UBERON:0005068,1.30e-25,52;UBERON:0006241,1.30e-25,52;UBERON:0007135,1.30e-25,52;UBERON:0000955,1.48e-25,47;UBERON:0006238,1.48e-25,47;UBERON:0001017,1.10e-23,73;UBERON:0002021,1.75e-23,10;UBERON:0000411,1.75e-23,10;UBERON:0001950,1.75e-23,10;UBERON:0001016,5.92e-23,75;UBERON:0003080,2.72e-21,40;UBERON:0002346,3.70e-20,64;UBERON:0003075,3.70e-20,64;UBERON:0007284,3.70e-20,64;UBERON:0003528,1.20e-19,29;UBERON:0002791,1.20e-19,29;UBERON:0001893,1.20e-19,29;UBERON:0002780,6.37e-19,39;UBERON:0001890,6.37e-19,39;UBERON:0006240,6.37e-19,39;UBERON:0004121,2.43e-17,95;UBERON:0000924,2.43e-17,95;UBERON:0006601,2.43e-17,95;UBERON:0010371,3.07e-17,73;UBERON:0003056,7.72e-17,49;UBERON:0002619,8.74e-17,17;UBERON:0000956,2.03e-16,21;UBERON:0001869,2.03e-16,21;UBERON:0000203,2.03e-16,21;UBERON:0002020,2.08e-16,34;UBERON:0002950,1.34e-15,4;UBERON:0001891,1.34e-15,4;UBERON:0009616,1.34e-15,4;UBERON:0010286,1.34e-15,4;UBERON:0010314,6.09e-13,92;UBERON:0002038,9.21e-12,3;UBERON:0009663,9.21e-12,3;UBERON:0009661,9.21e-12,3;UBERON:0000125,9.21e-12,3;UBERON:0002308,9.21e-12,3;UBERON:0004684,1.09e-11,3;UBERON:0002275,1.09e-11,3;UBERON:0000025,9.60e-10,114;UBERON:0004111,7.27e-09,122;UBERON:0001896,1.64e-08,2;UBERON:0002298,1.64e-08,2;UBERON:0005290,1.64e-08,2;UBERON:0010096,1.64e-08,2|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0.311068836925433,0.270011876663381,0.630974884054146,0,0.220868540951614,0,0.0958454710182364,0,1.10115880999389,3.31987079021488,2.4577045320999,0.131886287730194,0.0914876436024097,0,1.3959149950069,3.93933827022176,1.5279824777681,0.883885756421003,0,0.745597783301202,0,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0.29688427812965,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0.323533699894818,0,0.484875253135222,0,0.292780797011547,1.04723353406728,0,0,0,0,4.34392854273986,0.915001205637253,0.251308704225729,1.73824320192276,2.04572365864264,1.66230435647648,1.94689515681309,0,0,0,0.210441855886474,0.130120442962704,0,0,0,0.204109497453984,0,0.0937017245597288,0,0,0,0,0.43839146485515,0.278047249225598,0.696504333044333,0.205782136407943,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0.465067889500816,0,0,0,0,0,0,0,0,1.68231958851302,0.514523061896422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126473074248515,0,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0.50925170356284,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0.476087281772027,0.195133647857799,0.472905432318573,0,0.318909537314974,0,0.172684981865896,0.144649058581512,0,0,0,0,2.88991061978026,1.87538698547525,0.327869890753351,0,0.631016438832513,0.390438744296638,0,0,0.445597348164788,0.283076530788832,0,0,0.395287777946524,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0.18006109403131,0.129358683782755,0.214337035031592,0,0,0.658196082408484,0,0,0,0,0,0,0,0,0,0.291480836629851,3.52308073819968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:13612 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8C4U8 | |||
|association_with_transcript=37bp_to_ENSMUST00000043111_5end | |||
|cluster_id=chr13:88961284..88961289,+ | |||
|description=CAGE_peak_12_at_Edil3_5end | |||
|id=chr13:88961284..88961289,+ | |||
|ontology_enrichment_celltype=CL:0000540!5.47e-10!33;CL:0000047!5.47e-10!33;CL:0000031!5.47e-10!33;CL:0000404!5.47e-10!33;CL:0000117!1.40e-08!23;CL:0000337!1.40e-08!23;CL:0002319!2.44e-08!43;CL:0000221!5.62e-08!44;CL:0000133!5.62e-08!44;CL:0000393!2.22e-07!39;CL:0000211!2.22e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,9.21e-12,3;CL:0002610,1.09e-11,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.14e-28!73;UBERON:0005743!6.14e-28!73;UBERON:0000073!6.46e-28!75;UBERON:0001016!6.46e-28!75;UBERON:0000955!1.26e-24!50;UBERON:0006238!1.26e-24!50;UBERON:0002616!9.18e-24!49;UBERON:0001049!1.03e-22!52;UBERON:0005068!1.03e-22!52;UBERON:0006241!1.03e-22!52;UBERON:0007135!1.03e-22!52;UBERON:0002346!2.34e-22!71;UBERON:0003075!2.34e-22!71;UBERON:0007284!2.34e-22!71;UBERON:0004121!3.35e-22!102;UBERON:0000924!3.35e-22!102;UBERON:0006601!3.35e-22!102;UBERON:0000033!1.16e-21!63;UBERON:0003080!7.23e-19!40;UBERON:0002780!7.95e-18!39;UBERON:0001890!7.95e-18!39;UBERON:0006240!7.95e-18!39;UBERON:0003056!3.47e-17!49;UBERON:0002020!5.19e-16!34;UBERON:0002791!2.19e-15!29;UBERON:0003528!2.19e-15!29;UBERON:0001893!2.19e-15!29;UBERON:0000153!1.77e-13!94;UBERON:0007811!7.61e-12!86;UBERON:0000956!1.98e-11!21;UBERON:0001869!1.98e-11!21;UBERON:0000203!1.98e-11!21;UBERON:0000025!5.32e-10!114;UBERON:0002021!4.12e-09!10;UBERON:0000411!4.12e-09!10;UBERON:0001950!4.12e-09!10;UBERON:0004111!5.87e-09!122;UBERON:0002619!1.24e-08!17;UBERON:0002298!1.19e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.55e-30,54;UBERON:0002616,3.50e-26,46;UBERON:0001049,1.30e-25,52;UBERON:0005068,1.30e-25,52;UBERON:0006241,1.30e-25,52;UBERON:0007135,1.30e-25,52;UBERON:0000955,1.48e-25,47;UBERON:0006238,1.48e-25,47;UBERON:0001017,1.10e-23,73;UBERON:0002021,1.75e-23,10;UBERON:0000411,1.75e-23,10;UBERON:0001950,1.75e-23,10;UBERON:0001016,5.92e-23,75;UBERON:0003080,2.72e-21,40;UBERON:0002346,3.70e-20,64;UBERON:0003075,3.70e-20,64;UBERON:0007284,3.70e-20,64;UBERON:0003528,1.20e-19,29;UBERON:0002791,1.20e-19,29;UBERON:0001893,1.20e-19,29;UBERON:0002780,6.37e-19,39;UBERON:0001890,6.37e-19,39;UBERON:0006240,6.37e-19,39;UBERON:0004121,2.43e-17,95;UBERON:0000924,2.43e-17,95;UBERON:0006601,2.43e-17,95;UBERON:0010371,3.07e-17,73;UBERON:0003056,7.72e-17,49;UBERON:0002619,8.74e-17,17;UBERON:0000956,2.03e-16,21;UBERON:0001869,2.03e-16,21;UBERON:0000203,2.03e-16,21;UBERON:0002020,2.08e-16,34;UBERON:0002950,1.34e-15,4;UBERON:0001891,1.34e-15,4;UBERON:0009616,1.34e-15,4;UBERON:0010286,1.34e-15,4;UBERON:0010314,6.09e-13,92;UBERON:0002038,9.21e-12,3;UBERON:0009663,9.21e-12,3;UBERON:0009661,9.21e-12,3;UBERON:0000125,9.21e-12,3;UBERON:0002308,9.21e-12,3;UBERON:0004684,1.09e-11,3;UBERON:0002275,1.09e-11,3;UBERON:0000025,9.60e-10,114;UBERON:0004111,7.27e-09,122;UBERON:0001896,1.64e-08,2;UBERON:0002298,1.64e-08,2;UBERON:0005290,1.64e-08,2;UBERON:0010096,1.64e-08,2 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0.311068836925433,0.270011876663381,0.630974884054146,0,0.220868540951614,0,0.0958454710182364,0,1.10115880999389,3.31987079021488,2.4577045320999,0.131886287730194,0.0914876436024097,0,1.3959149950069,3.93933827022176,1.5279824777681,0.883885756421003,0,0.745597783301202,0,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0.29688427812965,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0.323533699894818,0,0.484875253135222,0,0.292780797011547,1.04723353406728,0,0,0,0,4.34392854273986,0.915001205637253,0.251308704225729,1.73824320192276,2.04572365864264,1.66230435647648,1.94689515681309,0,0,0,0.210441855886474,0.130120442962704,0,0,0,0.204109497453984,0,0.0937017245597288,0,0,0,0,0.43839146485515,0.278047249225598,0.696504333044333,0.205782136407943,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0.465067889500816,0,0,0,0,0,0,0,0,1.68231958851302,0.514523061896422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126473074248515,0,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0.50925170356284,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0.476087281772027,0.195133647857799,0.472905432318573,0,0.318909537314974,0,0.172684981865896,0.144649058581512,0,0,0,0,2.88991061978026,1.87538698547525,0.327869890753351,0,0.631016438832513,0.390438744296638,0,0,0.445597348164788,0.283076530788832,0,0,0.395287777946524,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0.18006109403131,0.129358683782755,0.214337035031592,0,0,0.658196082408484,0,0,0,0,0,0,0,0,0,0.291480836629851,3.52308073819968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,1.12950368523413,0,2.86447756719698,1.20297227640581,3.42541259885321,3.7769694869485,3.37511250115903,3.60256962579376,2.71885445390523,0.51776031175182,0,0,0.512200817262403,0,0,0,0,0,0,0,0,0,0.37456602987953,0.128050304809739,0.0574354689556133,0,0.231768651889711,0,0,0,0,0,0,0.145346416632329,0,0.169229215783353,0,0.263069711437843,0,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0.249810577937946,0,0,0.765153328275374,0,0.231867835620421 | |||
|short_description=p12@Edil3 | |||
}} |
Revision as of 09:26, 6 August 2015
Short description: | p12@Edil3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Edil3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 37bp_to_ENSMUST00000043111_5end |
EntrezGene: | 13612 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 9.21e-12 | 3 |
raphe nuclei neuron | 1.09e-11 | 3 |