FFCP PHASE1:Hg19::chr5:143550407..143550439,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57528 | |EntrezGene=57528 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29244 | |HGNC=29244 | ||
|TSSclassifier=strong | |||
|UniProt=A8K8W2,Q68DU8 | |UniProt=A8K8W2,Q68DU8 | ||
|association_with_transcript=0bp_to_NM_020768,uc003lnm.1_5end | |association_with_transcript=0bp_to_NM_020768,uc003lnm.1_5end | ||
|cluster_id=chr5:143550407..143550439,+ | |||
|description=CAGE_peak_5_at_KCTD16_5end | |description=CAGE_peak_5_at_KCTD16_5end | ||
|id=chr5:143550407..143550439,+ | |id=chr5:143550407..143550439,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000895;2.12e-08;1 | |ontology_enrichment_celltype_v019=CL:0000895;2.12e-08;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000810,1.18e-08,1;CL:0000895,1.18e-08,1;CL:0002436,1.18e-08,1;CL:0002427,1.18e-08,1;CL:0002428,1.18e-08,1;CL:0002429,1.18e-08,1;CL:0002433,1.18e-08,1;CL:0002431,1.18e-08,1;CL:0002432,1.18e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.38e-13;82!CL:0002427;2.12e-08;1 | |ontology_enrichment_development_v019=UBERON:0006601;2.38e-13;82!CL:0002427;2.12e-08;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p5@KCTD16 | |short_description=p5@KCTD16 | ||
}} | }} |
Latest revision as of 18:44, 15 September 2015
Short description: | p5@KCTD16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_KCTD16_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_020768, uc003lnm.1_5end |
EntrezGene: | KCTD16 |
HGNC: | 29244 |
UniProt: | A8K8W2Q68DU8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta thymocyte | 1.18e-08 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 1.18e-08 | 1 |
mature CD4 single-positive thymocyte | 1.18e-08 | 1 |
resting double-positive thymocyte | 1.18e-08 | 1 |
double-positive blast | 1.18e-08 | 1 |
CD69-positive double-positive thymocyte | 1.18e-08 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 1.18e-08 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 1.18e-08 | 1 |
CD24-positive, CD4 single-positive thymocyte | 1.18e-08 | 1 |