FFCP PHASE1:Hg19::chr11:119217365..119217398,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:119217365..119217398,- to FFCP PHASE1:Hg19::chr11:119217365..119217398,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=83552,114902 | |EntrezGene=83552,114902 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18121,14344 | |HGNC=18121,14344 | ||
|TSSclassifier=strong | |||
|UniProt=B4DHN8,Q9BXJ0,Q9BY79 | |UniProt=B4DHN8,Q9BXJ0,Q9BY79 | ||
|association_with_transcript=0bp_to_ENST00000360167,ENST00000445041,ENST00000449574,ENST00000530681,ENST00000555262,NM_015645,NM_031433,uc001pwj.2,uc010rzf.1,uc010rzg.1_5end | |||
|cluster_id=chr11:119217365..119217398,- | |||
|coexpression_cluster_id=C160 | |||
|description=CAGE_peak_1_at_MFRP_5end,CAGE_peak_2_at_C1QTNF5_5end | |||
|id=chr11:119217365..119217398,- | |||
|ontology_enrichment_celltype=CL:0002586!6.52e-23!3;CL:0000149!2.46e-17!4 | |||
|ontology_enrichment_celltype_v019=CL:0002586;4.81e-36;3!CL:0000149;3.16e-27;4!CL:0000147;3.34e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,4.81e-36,3;CL:0000149,3.16e-27,4;CL:0000147,3.34e-08,14 | |||
|ontology_enrichment_development_v019=UBERON:0006222;9.17e-13;1!UBERON:0006601;3.12e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!8.87e-43!86;UBERON:0000073!1.99e-38!94;UBERON:0001016!1.99e-38!94;UBERON:0001017!3.70e-30!82;UBERON:0003075!2.22e-29!86;UBERON:0007284!2.22e-29!86;UBERON:0000955!4.69e-29!69;UBERON:0006238!4.69e-29!69;UBERON:0002346!6.34e-28!90;UBERON:0001049!8.19e-25!57;UBERON:0005068!8.19e-25!57;UBERON:0006241!8.19e-25!57;UBERON:0007135!8.19e-25!57;UBERON:0000966!3.74e-24!5;UBERON:0005388!3.74e-24!5;UBERON:0001802!3.74e-24!5;UBERON:0000033!8.30e-24!123;UBERON:0001896!3.89e-23!3;UBERON:0005290!3.89e-23!3;UBERON:0010096!3.89e-23!3;UBERON:0001781!6.52e-23!3;UBERON:0001782!6.52e-23!3;UBERON:0005424!6.52e-23!3;UBERON:0000153!1.56e-22!129;UBERON:0007811!1.56e-22!129;UBERON:0002298!1.83e-22!8;UBERON:0002616!1.03e-20!59;UBERON:0004121!7.72e-20!169;UBERON:0000924!2.73e-19!173;UBERON:0006601!2.73e-19!173;UBERON:0007023!7.46e-19!115;UBERON:0003056!3.23e-17!61;UBERON:0003076!7.46e-17!15;UBERON:0003057!7.46e-17!15;UBERON:0001894!1.98e-16!7;UBERON:0006222!1.98e-16!7;UBERON:0001905!2.08e-15!2;UBERON:0002757!2.08e-15!2;UBERON:0010134!2.08e-15!2;UBERON:0002784!2.08e-15!2;UBERON:0005408!2.08e-15!2;UBERON:0001899!2.08e-15!2;UBERON:0004733!5.04e-15!12;UBERON:0002028!5.04e-15!12;UBERON:0007277!5.04e-15!12;UBERON:0004732!7.42e-14!13;UBERON:0002780!2.44e-12!41;UBERON:0001890!2.44e-12!41;UBERON:0006240!2.44e-12!41;UBERON:0003080!5.08e-12!42;UBERON:0000970!3.67e-09!20;UBERON:0002336!8.15e-09!1;UBERON:0001018!8.15e-09!1;UBERON:0002473!8.15e-09!1;UBERON:0005340!8.15e-09!1;UBERON:0002316!8.15e-09!1;UBERON:0003544!8.15e-09!1;UBERON:0001020!8.15e-09!1;UBERON:0005970!8.15e-09!1;UBERON:0002437!8.15e-09!1;UBERON:0002104!1.03e-08!21;UBERON:0002038!3.06e-08!1;UBERON:0009661!3.06e-08!1;UBERON:0001882!3.28e-08!1;UBERON:0005403!3.28e-08!1;UBERON:0003296!3.80e-08!4;UBERON:0010133!3.80e-08!4;UBERON:0000020!6.19e-08!23;UBERON:0001032!1.36e-07!24;UBERON:0004456!1.36e-07!24;UBERON:0000475!6.09e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;2.77e-38;5!UBERON:0005388;2.77e-38;5!UBERON:0001802;2.77e-38;5!UBERON:0001896;2.08e-36;3!UBERON:0005290;2.08e-36;3!UBERON:0001781;4.81e-36;3!UBERON:0001782;4.81e-36;3!UBERON:0001905;6.77e-24;2!UBERON:0002757;6.77e-24;2!UBERON:0010134;6.77e-24;2!UBERON:0005408;6.77e-24;2!UBERON:0001899;6.77e-24;2!UBERON:0002298;1.45e-18;6!UBERON:0004733;4.87e-16;12!UBERON:0002028;4.87e-16;12!UBERON:0001894;2.43e-15;7!UBERON:0000970;7.84e-15;20!UBERON:0004732;7.92e-15;13!UBERON:0002104;4.00e-14;21!UBERON:0000073;4.26e-14;53!UBERON:0002616;4.26e-14;53!UBERON:0002336;2.95e-13;1!UBERON:0011215;2.95e-13;1!UBERON:0001018;2.95e-13;1!UBERON:0002473;2.95e-13;1!UBERON:0005340;2.95e-13;1!UBERON:0003544;2.95e-13;1!UBERON:0005970;2.95e-13;1!UBERON:0002316;2.95e-13;1!UBERON:0001020;2.95e-13;1!UBERON:0002437;2.95e-13;1!UBERON:0000020;6.84e-13;23!UBERON:0003296;1.86e-12;4!UBERON:0010133;1.86e-12;4!UBERON:0002784;1.86e-12;4!UBERON:0001032;2.37e-12;24!UBERON:0004456;2.37e-12;24!UBERON:0000955;5.89e-11;68!UBERON:0000019;2.66e-10;19!UBERON:0000047;2.66e-10;19!UBERON:0004088;2.66e-10;19!UBERON:0010230;2.66e-10;19!UBERON:0007625;2.68e-10;11!UBERON:0001456;2.44e-09;21!UBERON:0001017;1.41e-08;75!UBERON:0002780;5.01e-08;41!UBERON:0001890;5.01e-08;41!UBERON:0005162;2.91e-07;2!UBERON:0000122;2.91e-07;2!UBERON:0001954;3.48e-07;2!UBERON:0003022;3.48e-07;2!UBERON:0002421;3.48e-07;2!UBERON:0002600;3.48e-07;2!UBERON:0002360;3.70e-07;2!UBERON:0000094;3.70e-07;2!UBERON:0010743;3.70e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,2.08e-36,3;UBERON:0005290,2.08e-36,3;UBERON:0010096,2.08e-36,3;UBERON:0001782,4.81e-36,3;UBERON:0005424,4.81e-36,3;UBERON:0000966,5.60e-32,6;UBERON:0005388,5.60e-32,6;UBERON:0001802,5.60e-32,6;UBERON:0001781,3.16e-27,4;UBERON:0003075,7.47e-26,82;UBERON:0007284,7.47e-26,82;UBERON:0002346,1.38e-24,86;UBERON:0001905,6.77e-24,2;UBERON:0002757,6.77e-24,2;UBERON:0010134,6.77e-24,2;UBERON:0005408,6.77e-24,2;UBERON:0001899,6.77e-24,2;UBERON:0000073,2.56e-20,53;UBERON:0002616,2.56e-20,53;UBERON:0010371,4.53e-20,104;UBERON:0001049,3.47e-19,56;UBERON:0005068,3.47e-19,56;UBERON:0006241,3.47e-19,56;UBERON:0007135,3.47e-19,56;UBERON:0000955,1.11e-18,68;UBERON:0006238,1.11e-18,68;UBERON:0001017,1.32e-18,81;UBERON:0002298,1.45e-18,6;UBERON:0003056,1.29e-17,61;UBERON:0001016,1.24e-16,89;UBERON:0004733,5.16e-16,12;UBERON:0002028,5.16e-16,12;UBERON:0007277,5.16e-16,12;UBERON:0010314,1.83e-15,132;UBERON:0001894,2.49e-15,7;UBERON:0006222,2.49e-15,7;UBERON:0004121,2.78e-15,171;UBERON:0000924,2.78e-15,171;UBERON:0006601,2.78e-15,171;UBERON:0004732,8.36e-15,13;UBERON:0000970,4.00e-14,21;UBERON:0002104,4.00e-14,21;UBERON:0002336,2.95e-13,1;UBERON:0011215,2.95e-13,1;UBERON:0001018,2.95e-13,1;UBERON:0002473,2.95e-13,1;UBERON:0005340,2.95e-13,1;UBERON:0003544,2.95e-13,1;UBERON:0005970,2.95e-13,1;UBERON:0002316,2.95e-13,1;UBERON:0001020,2.95e-13,1;UBERON:0002437,2.95e-13,1;UBERON:0007023,3.47e-13,114;UBERON:0003076,7.25e-13,15;UBERON:0003057,7.25e-13,15;UBERON:0003296,1.86e-12,4;UBERON:0010133,1.86e-12,4;UBERON:0002784,1.86e-12,4;UBERON:0000020,2.37e-12,24;UBERON:0001032,2.37e-12,24;UBERON:0004456,2.37e-12,24;UBERON:0007625,2.68e-10,11;UBERON:0000019,8.51e-10,20;UBERON:0000047,8.51e-10,20;UBERON:0010312,8.51e-10,20;UBERON:0004088,8.51e-10,20;UBERON:0010230,8.51e-10,20;UBERON:0003072,8.51e-10,20;UBERON:0004128,8.51e-10,20;UBERON:0003071,8.51e-10,20;UBERON:0002780,1.35e-09,41;UBERON:0001890,1.35e-09,41;UBERON:0003080,1.35e-09,41;UBERON:0006240,1.35e-09,41;UBERON:0001456,6.35e-09,22;UBERON:0005162,2.91e-07,2;UBERON:0000122,2.91e-07,2;UBERON:0001954,3.48e-07,2;UBERON:0003022,3.48e-07,2;UBERON:0002421,3.48e-07,2;UBERON:0002600,3.48e-07,2;UBERON:0002360,3.70e-07,2;UBERON:0000094,3.70e-07,2;UBERON:0010743,3.70e-07,2 | |||
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|short_description=p1@MFRP,p2@C1QTNF5 | |||
}} | }} |
Latest revision as of 03:30, 16 September 2015
Short description: | p1@MFRP, p2@C1QTNF5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MFRP_5end, CAGE_peak_2_at_C1QTNF5_5end |
Coexpression cluster: | C160_medulla_Hepatocyte_retina_corpus_liver_pineal_cerebral |
Association with transcript: | 0bp_to_ENST00000360167, ENST00000445041, ENST00000449574, ENST00000530681, ENST00000555262, NM_015645, NM_031433, uc001pwj.2, uc010rzf.1, uc010rzg.1_5end |
EntrezGene: | 83552,114902 |
HGNC: | 14344&submit=Submit 18121, 14344 |
UniProt: | B4DHN8Q9BXJ0Q9BY79 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 4.81e-36 | 3 |
visual pigment cell | 3.16e-27 | 4 |
pigment cell | 3.34e-08 | 14 |