FFCP PHASE1:Hg19::chr3:156008882..156008889,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7881 | |EntrezGene=7881 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6228 | |HGNC=6228 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=56bp_to_ENST00000302490_5end | |association_with_transcript=56bp_to_ENST00000302490_5end | ||
|cluster_id=chr3:156008882..156008889,+ | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_21_at_KCNAB1_5end | |description=CAGE_peak_21_at_KCNAB1_5end | ||
|id=chr3:156008882..156008889,+ | |id=chr3:156008882..156008889,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006222;4.27e-34;1!UBERON:0010122;5.48e-18;2!UBERON:0006601;7.76e-07;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!4.88e-71!34;UBERON:0001869!1.54e-69!32;UBERON:0002780!4.25e-69!41;UBERON:0001890!4.25e-69!41;UBERON:0006240!4.25e-69!41;UBERON:0003080!2.38e-67!42;UBERON:0002791!6.55e-67!33;UBERON:0001049!5.38e-61!57;UBERON:0005068!5.38e-61!57;UBERON:0006241!5.38e-61!57;UBERON:0007135!5.38e-61!57;UBERON:0002020!2.51e-59!34;UBERON:0003528!2.51e-59!34;UBERON:0002616!1.95e-54!59;UBERON:0000955!1.80e-52!69;UBERON:0006238!1.80e-52!69;UBERON:0005743!1.28e-50!86;UBERON:0001017!5.16e-50!82;UBERON:0003056!1.68e-48!61;UBERON:0002619!2.10e-47!22;UBERON:0000073!3.00e-45!94;UBERON:0001016!3.00e-45!94;UBERON:0003075!1.58e-44!86;UBERON:0007284!1.58e-44!86;UBERON:0002346!2.90e-42!90;UBERON:0000956!1.65e-41!25;UBERON:0000203!1.65e-41!25;UBERON:0001950!1.18e-39!20;UBERON:0007023!2.18e-34!115;UBERON:0002420!4.29e-33!9;UBERON:0007245!4.29e-33!9;UBERON:0010009!4.29e-33!9;UBERON:0010011!4.29e-33!9;UBERON:0000454!4.29e-33!9;UBERON:0000033!4.26e-31!123;UBERON:0000153!2.40e-29!129;UBERON:0007811!2.40e-29!129;UBERON:0009663!1.15e-24!7;UBERON:0000349!1.64e-23!5;UBERON:0004121!2.42e-22!169;UBERON:0000924!1.14e-21!173;UBERON:0006601!1.14e-21!173;UBERON:0001871!2.56e-20!7;UBERON:0000369!2.93e-20!4;UBERON:0002435!2.93e-20!4;UBERON:0000204!2.93e-20!4;UBERON:0010082!2.93e-20!4;UBERON:0000200!2.33e-19!6;UBERON:0002308!4.76e-19!9;UBERON:0000125!4.76e-19!9;UBERON:0000025!1.04e-18!194;UBERON:0005383!1.32e-15!3;UBERON:0005382!1.32e-15!3;UBERON:0002771!1.68e-14!3;UBERON:0004111!1.15e-13!241;UBERON:0000477!2.49e-11!286;UBERON:0001873!5.28e-11!2;UBERON:0010122!5.28e-11!2;UBERON:0000483!7.68e-11!309;UBERON:0000119!1.15e-10!312;UBERON:0001875!2.21e-10!2;UBERON:0006514!2.21e-10!2;UBERON:0001954!2.42e-10!2;UBERON:0003022!2.42e-10!2;UBERON:0002421!2.42e-10!2;UBERON:0002600!2.42e-10!2;UBERON:0001876!2.92e-10!2;UBERON:0001872!1.03e-08!5;UBERON:0002021!1.09e-08!5;UBERON:0000064!2.59e-08!219;UBERON:0000475!2.66e-07!365 | |ontology_enrichment_uberon=UBERON:0001893!4.88e-71!34;UBERON:0001869!1.54e-69!32;UBERON:0002780!4.25e-69!41;UBERON:0001890!4.25e-69!41;UBERON:0006240!4.25e-69!41;UBERON:0003080!2.38e-67!42;UBERON:0002791!6.55e-67!33;UBERON:0001049!5.38e-61!57;UBERON:0005068!5.38e-61!57;UBERON:0006241!5.38e-61!57;UBERON:0007135!5.38e-61!57;UBERON:0002020!2.51e-59!34;UBERON:0003528!2.51e-59!34;UBERON:0002616!1.95e-54!59;UBERON:0000955!1.80e-52!69;UBERON:0006238!1.80e-52!69;UBERON:0005743!1.28e-50!86;UBERON:0001017!5.16e-50!82;UBERON:0003056!1.68e-48!61;UBERON:0002619!2.10e-47!22;UBERON:0000073!3.00e-45!94;UBERON:0001016!3.00e-45!94;UBERON:0003075!1.58e-44!86;UBERON:0007284!1.58e-44!86;UBERON:0002346!2.90e-42!90;UBERON:0000956!1.65e-41!25;UBERON:0000203!1.65e-41!25;UBERON:0001950!1.18e-39!20;UBERON:0007023!2.18e-34!115;UBERON:0002420!4.29e-33!9;UBERON:0007245!4.29e-33!9;UBERON:0010009!4.29e-33!9;UBERON:0010011!4.29e-33!9;UBERON:0000454!4.29e-33!9;UBERON:0000033!4.26e-31!123;UBERON:0000153!2.40e-29!129;UBERON:0007811!2.40e-29!129;UBERON:0009663!1.15e-24!7;UBERON:0000349!1.64e-23!5;UBERON:0004121!2.42e-22!169;UBERON:0000924!1.14e-21!173;UBERON:0006601!1.14e-21!173;UBERON:0001871!2.56e-20!7;UBERON:0000369!2.93e-20!4;UBERON:0002435!2.93e-20!4;UBERON:0000204!2.93e-20!4;UBERON:0010082!2.93e-20!4;UBERON:0000200!2.33e-19!6;UBERON:0002308!4.76e-19!9;UBERON:0000125!4.76e-19!9;UBERON:0000025!1.04e-18!194;UBERON:0005383!1.32e-15!3;UBERON:0005382!1.32e-15!3;UBERON:0002771!1.68e-14!3;UBERON:0004111!1.15e-13!241;UBERON:0000477!2.49e-11!286;UBERON:0001873!5.28e-11!2;UBERON:0010122!5.28e-11!2;UBERON:0000483!7.68e-11!309;UBERON:0000119!1.15e-10!312;UBERON:0001875!2.21e-10!2;UBERON:0006514!2.21e-10!2;UBERON:0001954!2.42e-10!2;UBERON:0003022!2.42e-10!2;UBERON:0002421!2.42e-10!2;UBERON:0002600!2.42e-10!2;UBERON:0001876!2.92e-10!2;UBERON:0001872!1.03e-08!5;UBERON:0002021!1.09e-08!5;UBERON:0000064!2.59e-08!219;UBERON:0000475!2.66e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0000369;3.32e-74;4!UBERON:0002435;3.32e-74;4!UBERON:0000204;3.32e-74;4!UBERON:0005383;1.09e-44;3!UBERON:0005382;1.09e-44;3!UBERON:0009663;6.96e-43;7!UBERON:0001882;4.27e-34;1!UBERON:0005403;4.27e-34;1!UBERON:0001874;8.34e-34;1!UBERON:0002420;1.39e-33;9!UBERON:0000125;1.39e-33;9!UBERON:0007245;1.39e-33;9!UBERON:0002308;1.39e-33;9!UBERON:0010009;1.39e-33;9!UBERON:0010011;1.39e-33;9!UBERON:0000454;1.39e-33;9!UBERON:0000349;2.22e-27;5!UBERON:0001873;5.48e-18;2!UBERON:0001954;6.48e-18;2!UBERON:0003022;6.48e-18;2!UBERON:0002421;6.48e-18;2!UBERON:0002600;6.48e-18;2!UBERON:0002791;1.93e-17;32!UBERON:0003528;1.08e-16;34!UBERON:0002020;1.08e-16;34!UBERON:0001869;6.02e-16;32!UBERON:0001893;3.42e-15;34!UBERON:0002780;2.37e-14;41!UBERON:0001890;2.37e-14;41!UBERON:0000955;4.67e-12;68!UBERON:0000073;4.83e-10;53!UBERON:0002616;4.83e-10;53!UBERON:0001017;7.81e-10;75!UBERON:0001016;3.85e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,3.32e-74,4;UBERON:0002435,3.32e-74,4;UBERON:0000204,3.32e-74,4;UBERON:0010082,3.32e-74,4;UBERON:0005383,1.22e-44,3;UBERON:0005382,1.22e-44,3;UBERON:0009663,6.96e-43,7;UBERON:0001882,3.61e-34,1;UBERON:0005403,3.61e-34,1;UBERON:0001874,9.85e-34,1;UBERON:0002420,1.39e-33,9;UBERON:0000125,1.39e-33,9;UBERON:0007245,1.39e-33,9;UBERON:0002308,1.39e-33,9;UBERON:0010009,1.39e-33,9;UBERON:0010011,1.39e-33,9;UBERON:0000454,1.39e-33,9;UBERON:0000349,2.08e-27,5;UBERON:0002780,4.29e-20,41;UBERON:0001890,4.29e-20,41;UBERON:0003080,4.29e-20,41;UBERON:0006240,4.29e-20,41;UBERON:0001873,5.48e-18,2;UBERON:0010122,5.48e-18,2;UBERON:0001954,6.48e-18,2;UBERON:0003022,6.48e-18,2;UBERON:0002421,6.48e-18,2;UBERON:0002600,6.48e-18,2;UBERON:0000955,2.22e-17,68;UBERON:0006238,2.22e-17,68;UBERON:0002791,1.34e-16,32;UBERON:0001869,1.34e-16,32;UBERON:0000073,9.39e-16,53;UBERON:0002616,9.39e-16,53;UBERON:0003528,1.09e-15,34;UBERON:0002020,1.09e-15,34;UBERON:0001893,1.09e-15,34;UBERON:0001049,5.94e-15,56;UBERON:0005068,5.94e-15,56;UBERON:0006241,5.94e-15,56;UBERON:0007135,5.94e-15,56;UBERON:0001017,9.81e-15,81;UBERON:0003056,8.69e-14,61;UBERON:0001016,2.44e-13,89;UBERON:0003075,2.04e-10,82;UBERON:0007284,2.04e-10,82;UBERON:0002346,5.89e-10,86;UBERON:0010371,2.57e-08,104;UBERON:0007023,1.09e-07,114;UBERON:0004121,3.21e-07,171;UBERON:0000924,3.21e-07,171;UBERON:0006601,3.21e-07,171 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556608588971108,1.99613798001194,0,0,0,0,0,0,0,0,0,5.31444831488303,0.964771509003264,0,0,0,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,2.34264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.569797163602908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18091875923721,0.136203406111576,0,0,0,0,0,0.364497339948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854183854313742,0.1251909307065,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0.168942440653073,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50493977876192,0,0.159633859057151,0.205116364240755,0,0.345786262321089,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87798860003913,0,0.206686796501184,0.19024743058172,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.328863867814245,0,0,0,1.25692471932802,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0.339957450954573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556608588971108,1.99613798001194,0,0,0,0,0,0,0,0,0,5.31444831488303,0.964771509003264,0,0,0,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,2.34264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.569797163602908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18091875923721,0.136203406111576,0,0,0,0,0,0.364497339948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854183854313742,0.1251909307065,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0.168942440653073,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50493977876192,0,0.159633859057151,0.205116364240755,0,0.345786262321089,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87798860003913,0,0.206686796501184,0.19024743058172,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.328863867814245,0,0,0,1.25692471932802,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0.339957450954573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p21@KCNAB1 | |short_description=p21@KCNAB1 | ||
}} | }} |
Latest revision as of 06:02, 16 September 2015
Short description: | p21@KCNAB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_KCNAB1_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | 56bp_to_ENST00000302490_5end |
EntrezGene: | KCNAB1 |
HGNC: | 6228 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data