FFCP PHASE1:Hg19::chr13:111767485..111767533,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8874 | |EntrezGene=8874 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15607 | |HGNC=15607 | ||
|TSSclassifier=strong | |||
|UniProt=Q14155 | |UniProt=Q14155 | ||
|association_with_transcript=-90bp_to_ENST00000375739,ENST00000375741,NM_001113511,NM_001113512,NM_145735,uc001vrr.2,uc001vrs.2,uc001vrt.2_5end | |association_with_transcript=-90bp_to_ENST00000375739,ENST00000375741,NM_001113511,NM_001113512,NM_145735,uc001vrr.2,uc001vrs.2,uc001vrt.2_5end | ||
|cluster_id=chr13:111767485..111767533,+ | |||
|coexpression_cluster_id=C3352 | |||
|description=CAGE_peak_8_at_ARHGEF7_5end | |description=CAGE_peak_8_at_ARHGEF7_5end | ||
|id=chr13:111767485..111767533,+ | |id=chr13:111767485..111767533,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.57e-13;82!UBERON:0006215;1.25e-08;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!3.98e-52!86;UBERON:0001017!2.02e-49!82;UBERON:0000073!3.12e-49!94;UBERON:0001016!3.12e-49!94;UBERON:0001049!1.25e-43!57;UBERON:0005068!1.25e-43!57;UBERON:0006241!1.25e-43!57;UBERON:0007135!1.25e-43!57;UBERON:0007023!2.94e-43!115;UBERON:0002616!9.29e-43!59;UBERON:0000955!3.39e-42!69;UBERON:0006238!3.39e-42!69;UBERON:0003075!3.59e-39!86;UBERON:0007284!3.59e-39!86;UBERON:0003080!3.20e-37!42;UBERON:0002346!2.79e-36!90;UBERON:0002780!3.42e-36!41;UBERON:0001890!3.42e-36!41;UBERON:0006240!3.42e-36!41;UBERON:0003056!1.22e-33!61;UBERON:0001869!9.89e-31!32;UBERON:0001893!6.20e-30!34;UBERON:0002020!1.03e-29!34;UBERON:0003528!1.03e-29!34;UBERON:0000033!1.58e-29!123;UBERON:0004121!1.94e-29!169;UBERON:0002791!6.55e-29!33;UBERON:0000153!6.62e-29!129;UBERON:0007811!6.62e-29!129;UBERON:0000924!5.17e-28!173;UBERON:0006601!5.17e-28!173;UBERON:0002619!1.93e-24!22;UBERON:0000956!1.42e-23!25;UBERON:0000203!1.42e-23!25;UBERON:0001950!1.77e-22!20;UBERON:0000475!4.22e-17!365;UBERON:0000025!2.58e-11!194;UBERON:0000119!5.00e-10!312;UBERON:0000483!5.41e-10!309;UBERON:0000481!9.00e-10!347;UBERON:0000064!1.66e-09!219;UBERON:0001871!1.79e-09!7;UBERON:0004111!3.52e-09!241;UBERON:0000062!1.80e-08!511;UBERON:0002420!2.28e-08!9;UBERON:0007245!2.28e-08!9;UBERON:0010009!2.28e-08!9;UBERON:0010011!2.28e-08!9;UBERON:0000454!2.28e-08!9;UBERON:0003076!5.28e-08!15;UBERON:0003057!5.28e-08!15;UBERON:0000477!1.16e-07!286;UBERON:0002308!1.32e-07!9;UBERON:0000125!1.32e-07!9;UBERON:0001894!1.33e-07!7;UBERON:0006222!1.33e-07!7;UBERON:0000468!1.61e-07!659;UBERON:0004733!2.98e-07!12;UBERON:0002028!2.98e-07!12;UBERON:0007277!2.98e-07!12;UBERON:0000200!4.05e-07!6;UBERON:0002021!8.12e-07!5;UBERON:0000349!9.94e-07!5 | |ontology_enrichment_uberon=UBERON:0005743!3.98e-52!86;UBERON:0001017!2.02e-49!82;UBERON:0000073!3.12e-49!94;UBERON:0001016!3.12e-49!94;UBERON:0001049!1.25e-43!57;UBERON:0005068!1.25e-43!57;UBERON:0006241!1.25e-43!57;UBERON:0007135!1.25e-43!57;UBERON:0007023!2.94e-43!115;UBERON:0002616!9.29e-43!59;UBERON:0000955!3.39e-42!69;UBERON:0006238!3.39e-42!69;UBERON:0003075!3.59e-39!86;UBERON:0007284!3.59e-39!86;UBERON:0003080!3.20e-37!42;UBERON:0002346!2.79e-36!90;UBERON:0002780!3.42e-36!41;UBERON:0001890!3.42e-36!41;UBERON:0006240!3.42e-36!41;UBERON:0003056!1.22e-33!61;UBERON:0001869!9.89e-31!32;UBERON:0001893!6.20e-30!34;UBERON:0002020!1.03e-29!34;UBERON:0003528!1.03e-29!34;UBERON:0000033!1.58e-29!123;UBERON:0004121!1.94e-29!169;UBERON:0002791!6.55e-29!33;UBERON:0000153!6.62e-29!129;UBERON:0007811!6.62e-29!129;UBERON:0000924!5.17e-28!173;UBERON:0006601!5.17e-28!173;UBERON:0002619!1.93e-24!22;UBERON:0000956!1.42e-23!25;UBERON:0000203!1.42e-23!25;UBERON:0001950!1.77e-22!20;UBERON:0000475!4.22e-17!365;UBERON:0000025!2.58e-11!194;UBERON:0000119!5.00e-10!312;UBERON:0000483!5.41e-10!309;UBERON:0000481!9.00e-10!347;UBERON:0000064!1.66e-09!219;UBERON:0001871!1.79e-09!7;UBERON:0004111!3.52e-09!241;UBERON:0000062!1.80e-08!511;UBERON:0002420!2.28e-08!9;UBERON:0007245!2.28e-08!9;UBERON:0010009!2.28e-08!9;UBERON:0010011!2.28e-08!9;UBERON:0000454!2.28e-08!9;UBERON:0003076!5.28e-08!15;UBERON:0003057!5.28e-08!15;UBERON:0000477!1.16e-07!286;UBERON:0002308!1.32e-07!9;UBERON:0000125!1.32e-07!9;UBERON:0001894!1.33e-07!7;UBERON:0006222!1.33e-07!7;UBERON:0000468!1.61e-07!659;UBERON:0004733!2.98e-07!12;UBERON:0002028!2.98e-07!12;UBERON:0007277!2.98e-07!12;UBERON:0000200!4.05e-07!6;UBERON:0002021!8.12e-07!5;UBERON:0000349!9.94e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.75e-48;22!UBERON:0001869;4.33e-48;32!UBERON:0002780;1.35e-45;41!UBERON:0001890;1.35e-45;41!UBERON:0002791;6.35e-45;32!UBERON:0001950;7.25e-44;20!UBERON:0001893;2.10e-43;34!UBERON:0000956;6.28e-42;25!UBERON:0000203;6.28e-42;25!UBERON:0003528;4.83e-41;34!UBERON:0002020;4.83e-41;34!UBERON:0000073;3.23e-32;53!UBERON:0002616;3.23e-32;53!UBERON:0000955;5.68e-23;68!UBERON:0001017;1.88e-22;75!UBERON:0001016;1.53e-21;83!UBERON:0001871;4.87e-17;6!UBERON:0001894;5.01e-15;7!UBERON:0002420;8.40e-14;9!UBERON:0007245;8.40e-14;9!UBERON:0010009;8.40e-14;9!UBERON:0010011;8.40e-14;9!UBERON:0000454;8.40e-14;9!UBERON:0002021;4.64e-13;5!UBERON:0000349;5.13e-13;5!UBERON:0001872;7.40e-13;5!UBERON:0000369;1.89e-11;4!UBERON:0002435;1.89e-11;4!UBERON:0000204;1.89e-11;4!UBERON:0007023;2.80e-11;114!UBERON:0000200;2.79e-10;6!UBERON:0009663;1.71e-09;7!UBERON:0003296;4.15e-09;4!UBERON:0010133;4.15e-09;4!UBERON:0002784;4.15e-09;4!UBERON:0005383;4.41e-09;3!UBERON:0005382;4.41e-09;3!UBERON:0011216;1.53e-08;132!UBERON:0010314;1.58e-07;132!UBERON:0000125;2.90e-07;9!UBERON:0002308;2.90e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,3.33e-64,41;UBERON:0001890,3.33e-64,41;UBERON:0003080,3.33e-64,41;UBERON:0006240,3.33e-64,41;UBERON:0001049,4.60e-63,56;UBERON:0005068,4.60e-63,56;UBERON:0006241,4.60e-63,56;UBERON:0007135,4.60e-63,56;UBERON:0000073,1.16e-60,53;UBERON:0002616,1.16e-60,53;UBERON:0001017,6.01e-57,81;UBERON:0001016,1.77e-54,89;UBERON:0001869,4.03e-54,32;UBERON:0001893,1.60e-50,34;UBERON:0002791,4.79e-50,32;UBERON:0000955,1.51e-49,68;UBERON:0006238,1.51e-49,68;UBERON:0002619,1.97e-48,22;UBERON:0003528,1.06e-46,34;UBERON:0002020,1.06e-46,34;UBERON:0003056,5.58e-45,61;UBERON:0001950,4.73e-44,20;UBERON:0003075,9.43e-44,82;UBERON:0007284,9.43e-44,82;UBERON:0000956,4.69e-42,25;UBERON:0000203,4.69e-42,25;UBERON:0002346,3.68e-41,86;UBERON:0010371,7.17e-38,104;UBERON:0007023,4.72e-33,114;UBERON:0010314,4.67e-31,132;UBERON:0004121,5.88e-30,171;UBERON:0000924,5.88e-30,171;UBERON:0006601,5.88e-30,171;UBERON:0011216,1.58e-20,223;UBERON:0001871,4.30e-17,6;UBERON:0001894,5.78e-15,7;UBERON:0006222,5.78e-15,7;UBERON:0000025,1.16e-14,192;UBERON:0002420,7.70e-14,9;UBERON:0007245,7.70e-14,9;UBERON:0010009,7.70e-14,9;UBERON:0010011,7.70e-14,9;UBERON:0000454,7.70e-14,9;UBERON:0002021,3.15e-13,5;UBERON:0000349,4.91e-13,5;UBERON:0001872,7.28e-13,5;UBERON:0000369,1.81e-11,4;UBERON:0002435,1.81e-11,4;UBERON:0000204,1.81e-11,4;UBERON:0010082,1.81e-11,4;UBERON:0000200,3.16e-10,6;UBERON:0004111,4.70e-10,240;UBERON:0000483,6.78e-10,306;UBERON:0000119,1.13e-09,309;UBERON:0009663,1.72e-09,7;UBERON:0002784,3.94e-09,4;UBERON:0005383,4.31e-09,3;UBERON:0005382,4.31e-09,3;UBERON:0003296,6.16e-09,4;UBERON:0010133,6.16e-09,4;UBERON:0000125,2.91e-07,9;UBERON:0002308,2.91e-07,9 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,1.0007329835313,0.446961094427288,0,0,0,2.08948502559871,0.245733936501509,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443458794925128,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0,0,0,0,0.560677600142307,0,0,0,0,0,0.454072282934794,0.576175924479999,0.234321431833797,0.312160076830321,0,0.298897361103602,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0.600952235626387,0,0,0.213557388818567,0,0,0,0.257640540045629,0.37223371266318,0,0,0.252433774244115,0.460249493211497,0.323292113637624,0,0,0,0,0,0,0.365921118388786,0,0.232387885739037,0.414644220061482,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0,0.325808305310325,0,0,0.231860809950154,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,1.71072446022705,0,0,0,0,0.43596006883328,0,0,0,0,0.26593811658487,0,0.257207374262142,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0.479249710983165,1.14861935834114,0,0,0,0,0,0,0,0,0.508189248444927,2.60279707715243,3.09315525111078,4.02039036802437,0.637938751653163,0,0,0,0.36807447515742,0,0,0.831883446123229,0.178428988797162,0,0.234282829985426,0,0,0,0.664225598535437,0.184369168541703,0.521301686808497,0,0,0,0,0,0,0,0,0.248107807818777,0,0.280660094433074,0,1.02341449813341,0.160853921143607,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0.131124414959424,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.656029291399411,0.325378394664303,0.309123034943167,0,0,0,0,0,0.096670718292122,0,0,0,0,0.290033387828457,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0.744316738719335,0,0,0,0.42793898803392,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,1.31178950409327,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61158997199083,0,0,0,0,0,0,4.97073823883149,3.51673541026282,0,0,1.26675244876796,1.9924798825107,0.276283915531148,0,0,0,0.622079175323615,0,0,0,0.295930216910801,0,0,0.969332746095218,2.78304294485554,3.99227596002388,0,0,2.89999830173917,0.1137934482855,0,0,0.689486746482929,0,0,6.20018970069687,6.75340056302285,7.62908681585416,5.30780447669878,2.65992857058193,3.51016635446356,0,0,0.769502585037971,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.404406797884062,0,2.57690890297873,0,0,0,0,1.20990716048664,7.95789180239274,1.01098527405581,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.0969890164884194,0.264768380074501,0.677942222341597,0,0,3.29216138970569,0.195551382734803,0,0.213452994739353,0,0,0,1.02956998717179,0,0.124252535565433,0,0.271808412147228,0.209205692624666,0,0,2.40168115483916,0.958337652243951,0,0,0,0.558564802544508,0.687481272035051,0,0.199679000498991,0,0.446342914883745,0.739018197353989,0,0,0,0,0,0.196854963029498,0,2.38568906942791,3.40508515278939,0.160753148465019,0,0.415440338029185,0,0,3.88797162611358,0,0.394028536495991,1.10154635083496,0,0.179287339332845,0,1.42939065274673,1.32418394073086,0,0,0,0,1.19730191562487,0,0,0,0.293104467356165,2.65013777824443,0.517131825446202,0.79339561045614,0,0,0.213574825135389,0.471612915298998,0,0,0,0,0,3.80812462358632,2.506898940227,1.83807346058077,2.29510841496863,0,0.886068179966986,2.68457782784319,2.3786276834235,0.573409195690071,0.665574309221114,0.993542447062135,0,0,0,0,0,5.62001886968258,6.23160423026548,0,0,0,0,0.251567901752575,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,2.35039341457942,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02315497042921,0,0,1.09209638192014,0,0,0,0,0.636008701306837,0.552032215008773,2.40171224485641,0.705351887381368,0,4.56027498184863,7.08482881627925,2.71377560397157,2.66651273512982,5.79764901309952,4.21859240031729,3.06803726700517,0,0,0,0,0,0,0,0.198916222116275,0.225630985047772,0,0,0,0,0,3.17426647706455,2.34323429584154,2.68692835451539,3.29762213008315,8.20462213527329,0,0.992422356778588,0,0,1.07140367175657,1.3451348888753,1.21393120847326,2.27662191351298,0.0887023701626388,0,0,1.83518279037446,3.485956998831,0,0,0.235479278551542,8.3271262655481,0,0,0,0,1.42953088353313,0.790068058663633,0,0.695433089210318,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0.111855431797792,0,0,1.29485767437579,0.923965261706223,1.1598144313382,2.4285549652957,2.33939463462106,2.38740930193642,0.118920090777569,0,0,0.754814217833368,0,0,3.29222107453066,0,0.235676547101626,1.17785080268967,0,2.113278637917,0,0.0939839179798536,0,0,0,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| ||
|short_description=p8@ARHGEF7 | |short_description=p8@ARHGEF7 | ||
}} | }} |
Latest revision as of 13:50, 16 September 2015
Short description: | p8@ARHGEF7 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ARHGEF7_5end |
Coexpression cluster: | C3352_merkel_parietal_occipital_temporal_duodenum_mature_cerebellum |
Association with transcript: | -90bp_to_ENST00000375739, ENST00000375741, NM_001113511, NM_001113512, NM_145735, uc001vrr.2, uc001vrs.2, uc001vrt.2_5end |
EntrezGene: | ARHGEF7 |
HGNC: | 15607 |
UniProt: | Q14155 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data