FFCP PHASE1:Hg19::chr3:170136642..170136663,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5010 | |EntrezGene=5010 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8514 | |HGNC=8514 | ||
|TSSclassifier=strong | |||
|UniProt=O75508,B4DFI2 | |UniProt=O75508,B4DFI2 | ||
|association_with_transcript=0bp_to_ENST00000064724,ENST00000486429,ENST00000486975,NM_005602,uc003fgx.2,uc011bpt.1_5end | |association_with_transcript=0bp_to_ENST00000064724,ENST00000486429,ENST00000486975,NM_005602,uc003fgx.2,uc011bpt.1_5end | ||
|cluster_id=chr3:170136642..170136663,+ | |||
|coexpression_cluster_id=C635 | |coexpression_cluster_id=C635 | ||
|description=CAGE_peak_1_at_CLDN11_5end | |description=CAGE_peak_1_at_CLDN11_5end | ||
|id=chr3:170136642..170136663,+ | |id=chr3:170136642..170136663,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.47e-25!180;CL:0000222!1.34e-24!119;CL:0000183!8.07e-20!59;CL:0000680!1.74e-17!57;CL:0000056!1.74e-17!57;CL:0000355!1.74e-17!57;CL:0000187!2.57e-17!54;CL:0000057!2.57e-16!75;CL:0000393!3.15e-15!60;CL:0000211!3.15e-15!60;CL:0000192!3.13e-13!42;CL:0000514!3.13e-13!42;CL:0000220!2.45e-11!246;CL:0002321!3.06e-11!248;CL:0000359!2.68e-08!32;CL:0000213!2.70e-08!57;CL:0000215!2.70e-08!57;CL:0002078!7.25e-07!44 | |ontology_enrichment_celltype=CL:0000055!2.47e-25!180;CL:0000222!1.34e-24!119;CL:0000183!8.07e-20!59;CL:0000680!1.74e-17!57;CL:0000056!1.74e-17!57;CL:0000355!1.74e-17!57;CL:0000187!2.57e-17!54;CL:0000057!2.57e-16!75;CL:0000393!3.15e-15!60;CL:0000211!3.15e-15!60;CL:0000192!3.13e-13!42;CL:0000514!3.13e-13!42;CL:0000220!2.45e-11!246;CL:0002321!3.06e-11!248;CL:0000359!2.68e-08!32;CL:0000213!2.70e-08!57;CL:0000215!2.70e-08!57;CL:0002078!7.25e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:0000187;2.77e-10;55!CL:0000192;1.74e-09;43!CL:0000393;1.65e-08;61!CL:0000211;1.65e-08;61!CL:0000359;5.33e-08;32!CL:0000057;5.62e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.27e-26,121;CL:0000680,4.52e-18,58;CL:0000056,4.52e-18,58;CL:0000355,4.52e-18,58;CL:0000187,6.83e-18,55;CL:0000057,2.38e-16,76;CL:0000393,1.63e-15,61;CL:0000211,1.63e-15,61;CL:0000192,1.11e-13,43;CL:0000514,1.11e-13,43;CL:0002321,2.32e-10,250;CL:0000213,4.69e-09,58;CL:0000215,4.69e-09,58;CL:0000359,1.68e-08,32;CL:0002078,1.85e-07,45;CL:0000115,6.55e-07,36 | |||
|ontology_enrichment_development_v019=CL:0000355;5.39e-10;58!CL:0000514;1.74e-09;43!CL:0000222;2.95e-08;121 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!4.19e-34!312;UBERON:0000483!1.62e-32!309;UBERON:0000475!8.00e-29!365;UBERON:0000477!2.19e-26!286;UBERON:0004111!1.25e-25!241;UBERON:0000481!3.00e-22!347;UBERON:0000025!1.27e-21!194;UBERON:0000914!7.17e-21!83;UBERON:0002329!7.17e-21!83;UBERON:0003077!7.17e-21!83;UBERON:0003059!7.17e-21!83;UBERON:0007282!7.17e-21!83;UBERON:0009618!7.17e-21!83;UBERON:0007285!7.17e-21!83;UBERON:0005256!1.10e-20!143;UBERON:0004290!1.36e-19!70;UBERON:0002049!3.15e-18!79;UBERON:0007798!3.15e-18!79;UBERON:0000486!5.44e-17!82;UBERON:0001134!3.17e-16!61;UBERON:0002036!3.17e-16!61;UBERON:0003082!3.17e-16!61;UBERON:0002385!6.19e-16!63;UBERON:0001015!6.19e-16!63;UBERON:0000383!6.19e-16!63;UBERON:0003075!6.63e-16!86;UBERON:0007284!6.63e-16!86;UBERON:0000468!2.32e-14!659;UBERON:0002616!3.51e-14!59;UBERON:0002346!7.22e-14!90;UBERON:0000055!1.35e-13!69;UBERON:0000467!1.65e-13!625;UBERON:0001049!1.87e-13!57;UBERON:0005068!1.87e-13!57;UBERON:0006241!1.87e-13!57;UBERON:0007135!1.87e-13!57;UBERON:0000490!2.15e-13!138;UBERON:0000480!2.92e-13!626;UBERON:0003914!3.99e-13!118;UBERON:0004535!8.37e-13!110;UBERON:0004872!1.10e-12!84;UBERON:0000033!1.24e-12!123;UBERON:0002100!1.70e-12!216;UBERON:0001009!1.79e-12!113;UBERON:0000153!1.64e-11!129;UBERON:0007811!1.64e-11!129;UBERON:0005743!1.71e-11!86;UBERON:0003056!1.74e-11!61;UBERON:0000955!4.46e-11!69;UBERON:0006238!4.46e-11!69;UBERON:0001017!5.91e-11!82;UBERON:0001981!9.77e-11!60;UBERON:0007500!9.77e-11!60;UBERON:0004537!9.77e-11!60;UBERON:0006965!9.77e-11!60;UBERON:0000073!1.07e-10!94;UBERON:0001016!1.07e-10!94;UBERON:0004121!1.84e-09!169;UBERON:0000064!2.72e-09!219;UBERON:0000922!6.67e-09!612;UBERON:0002050!8.26e-09!605;UBERON:0005423!8.26e-09!605;UBERON:0000923!9.55e-09!604;UBERON:0005291!9.55e-09!604;UBERON:0006598!9.55e-09!604;UBERON:0002532!9.55e-09!604;UBERON:0003080!1.06e-08!42;UBERON:0002780!1.25e-08!41;UBERON:0001890!1.25e-08!41;UBERON:0006240!1.25e-08!41;UBERON:0000924!1.79e-08!173;UBERON:0006601!1.79e-08!173;UBERON:0003104!1.70e-07!238;UBERON:0009142!1.70e-07!238;UBERON:0001893!1.91e-07!34;UBERON:0007023!2.02e-07!115;UBERON:0002020!2.02e-07!34;UBERON:0003528!2.02e-07!34;UBERON:0001637!3.16e-07!42;UBERON:0003509!3.16e-07!42;UBERON:0004572!3.16e-07!42;UBERON:0002791!3.45e-07!33;UBERON:0003103!8.03e-07!69 | |ontology_enrichment_uberon=UBERON:0000119!4.19e-34!312;UBERON:0000483!1.62e-32!309;UBERON:0000475!8.00e-29!365;UBERON:0000477!2.19e-26!286;UBERON:0004111!1.25e-25!241;UBERON:0000481!3.00e-22!347;UBERON:0000025!1.27e-21!194;UBERON:0000914!7.17e-21!83;UBERON:0002329!7.17e-21!83;UBERON:0003077!7.17e-21!83;UBERON:0003059!7.17e-21!83;UBERON:0007282!7.17e-21!83;UBERON:0009618!7.17e-21!83;UBERON:0007285!7.17e-21!83;UBERON:0005256!1.10e-20!143;UBERON:0004290!1.36e-19!70;UBERON:0002049!3.15e-18!79;UBERON:0007798!3.15e-18!79;UBERON:0000486!5.44e-17!82;UBERON:0001134!3.17e-16!61;UBERON:0002036!3.17e-16!61;UBERON:0003082!3.17e-16!61;UBERON:0002385!6.19e-16!63;UBERON:0001015!6.19e-16!63;UBERON:0000383!6.19e-16!63;UBERON:0003075!6.63e-16!86;UBERON:0007284!6.63e-16!86;UBERON:0000468!2.32e-14!659;UBERON:0002616!3.51e-14!59;UBERON:0002346!7.22e-14!90;UBERON:0000055!1.35e-13!69;UBERON:0000467!1.65e-13!625;UBERON:0001049!1.87e-13!57;UBERON:0005068!1.87e-13!57;UBERON:0006241!1.87e-13!57;UBERON:0007135!1.87e-13!57;UBERON:0000490!2.15e-13!138;UBERON:0000480!2.92e-13!626;UBERON:0003914!3.99e-13!118;UBERON:0004535!8.37e-13!110;UBERON:0004872!1.10e-12!84;UBERON:0000033!1.24e-12!123;UBERON:0002100!1.70e-12!216;UBERON:0001009!1.79e-12!113;UBERON:0000153!1.64e-11!129;UBERON:0007811!1.64e-11!129;UBERON:0005743!1.71e-11!86;UBERON:0003056!1.74e-11!61;UBERON:0000955!4.46e-11!69;UBERON:0006238!4.46e-11!69;UBERON:0001017!5.91e-11!82;UBERON:0001981!9.77e-11!60;UBERON:0007500!9.77e-11!60;UBERON:0004537!9.77e-11!60;UBERON:0006965!9.77e-11!60;UBERON:0000073!1.07e-10!94;UBERON:0001016!1.07e-10!94;UBERON:0004121!1.84e-09!169;UBERON:0000064!2.72e-09!219;UBERON:0000922!6.67e-09!612;UBERON:0002050!8.26e-09!605;UBERON:0005423!8.26e-09!605;UBERON:0000923!9.55e-09!604;UBERON:0005291!9.55e-09!604;UBERON:0006598!9.55e-09!604;UBERON:0002532!9.55e-09!604;UBERON:0003080!1.06e-08!42;UBERON:0002780!1.25e-08!41;UBERON:0001890!1.25e-08!41;UBERON:0006240!1.25e-08!41;UBERON:0000924!1.79e-08!173;UBERON:0006601!1.79e-08!173;UBERON:0003104!1.70e-07!238;UBERON:0009142!1.70e-07!238;UBERON:0001893!1.91e-07!34;UBERON:0007023!2.02e-07!115;UBERON:0002020!2.02e-07!34;UBERON:0003528!2.02e-07!34;UBERON:0001637!3.16e-07!42;UBERON:0003509!3.16e-07!42;UBERON:0004572!3.16e-07!42;UBERON:0002791!3.45e-07!33;UBERON:0003103!8.03e-07!69 | ||
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|phase1_expression=105.191781597652,17.3421424351696,79.3573295060318,93.0681674684113,69.7259307306569,172.723027771873,15.1979926900986,482.633983298099,147.308694304709,533.242642208274,57.2196957737391,0.655324116390517,2.63766978228454,1938.92368547209,1613.24242504349,166.064311173588,185.027220103361,219.823337206599,226.888751437586,445.944472354126,945.135202534624,137.293168007402,19.4640471249119,19.1624195102038,31.3856598987007,0.0764134057479513,0,0,0,0,0.154816123316076,9.19421224478927,1.8072355126695,1.47901604066715,0,0,0,8.30993112797816,0,1.08505435357926,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63239701580021,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,238.930728987682,156.273300310947,1257.78402085481,73.0107087816824,9.5254203020819,38.6740205625399,0,23.3584737745265,90.6588896603411,142.793731965891,193.148693739184,212.251591844043,15.3004021082868,22.2470665670658,0.324547393654683,0,0.398873881556595,0,0,0,45.9141161017089,75.7006443693389,29.5069426366455,11.8714667804042,2.93649605346934,0,125.396979922086,1014.02736298045,939.222933492915,567.351438636116,313.804038028026,446.279726056767,188.659970484735,1228.73001451589,0,542.227950140932,262.923895345245,397.518526106127,354.16143254619,266.743650338644,188.697796248319,0,0,4.36094052142534,68.582129333954,386.856213135291,299.377157818688,752.08561960339,432.340757899797,296.59845047528,44.8345782064761,10.1133694851036,338.597606514946,63.044594528614,163.952288822799,2357.6946504251,1309.64787634304,562.137114969278,414.548582030666,377.081874040881,1348.4754446189,532.213147853542,368.099075493131,410.116355570566,82.0699768444671,387.173768166693,101.98254602048,134.244322872872,51.6787882192184,2851.53554695184,3889.8800016513,255.365884868318,247.609550826617,75.6385035271819,16.6811495934718,63.7494615261961,74.8185533354852,147.234973741707,57.225293784747,98.6635136341782,549.751351607903,96.6293329391775,288.134871750675,148.143310526237,232.087719845493,109.704615956823,137.970799308257,65.1279137549815,348.777065955672,736.782726980145,49.701342952326,18.5383860738858,133.783307332975,0.773043412653187,14.4555443913142,9.75135624322613,2.80539524098069,5.03613119621644,4.99633954338929,5.70135802584537,3.28017106138317,0,352.011447742086,323.550191911021,70.4488098897651,24.1471322576629,59.9159969785756,0,0,0,0,0,0,0,0,0,77.5063227355881,173.899799516273,1090.25955601688,767.385473432529,0,0,12.4065880403095,0,0.122988438543114,412.963719388551,0,1.1240175325762,0.904760751704678,4.44424536760942,429.089538093698,1307.19802509643,684.130561199795,22.3745681601898,283.189770496802,337.38438841763,482.893889617405,255.7015806033,0,0,0.738651018262192,0,0,14.0600750980165,0.16798212819886,6.80520466763455,0,0,17.2522205624345,0,0,1.65862492432618,1.00883967391873,1.13618190083742,0.507983154337352,1.52795370223311,7.03304683260282,128.304334517029,8.02054443085923,0,0.571652865261156,745.895973065339,1514.52527912682,544.096742505628,581.851992625758,579.40344228005,204.563266118552,173.65759012992,202.814501977164,265.695217612793,184.403871630262,313.046060343917,870.021091409828,36.8982691666181,223.921371604369,142.346712536362,672.756958969639,97.4100803708118,617.046404840973,160.362156382454,487.368332012528,0,0,0,0.958499421966331,0,206.823512309042,367.165393708981,38.2185959943713,13.0714503165124,0,0,0,0,1.52456774533478,1.30139853857622,0,1.17261385734044,0.637938751653163,0,0,0,2831.59693738603,2666.40904776914,1019.14269403991,576.495228163397,331.342632196329,400.40643177116,1191.56247330588,39.4239390643312,15.9185252839189,225.571295417661,22.5836703502048,81.4911724954328,201.048683879144,3620.55920264354,2525.5355992479,0,0,0,0,73.2315933846187,58.0589363192986,66.9891081110698,0.920771839728375,9.26178311629143,131.983323733372,71.6390148693385,23.6455264081103,170.68077641174,2554.63778753479,1531.46988082572,2272.12989827804,1802.85137812553,2665.16881960071,0.362578348774867,10.2258299854675,6.81399318125633,1244.47380365617,1766.46642083316,1959.91663039851,71.7407384522785,5.39107359730903,246.285827521533,83.2993580523586,8.65523356921581,1208.98587267363,1189.63537470395,135.163363479939,424.124944898296,264.985615917888,269.407408560056,99.65662276061,14.1282921517883,198.576907438572,0,0,114.889656052142,416.578600038626,43.9260832796809,12.983167467613,0,0,41.3471187357244,16.9015663969496,679.693023240795,1060.09109679141,450.43815644322,241.15427299475,251.689581356753,335.36600447875,474.349605793441,436.956918762349,108.530051453373,0.165284915360978,1.72971060628596,0.638063562472921,0.30347334256665,109.703549634159,750.512634844246,181.926727511917,70.5396898603243,172.467153822715,225.312644947444,40.7713282028624,22.3274823317506,426.121332916819,276.515617204166,276.223150995622,643.327047356693,102.277418140107,651.3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| ||
|short_description=p1@CLDN11 | |short_description=p1@CLDN11 | ||
}} | }} |
Latest revision as of 16:16, 16 September 2015
Short description: | p1@CLDN11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CLDN11_5end |
Coexpression cluster: | C635_Fibroblast_Pericytes_Nucleus_Preadipocyte_Smooth_mesothelioma_Prostate |
Association with transcript: | 0bp_to_ENST00000064724, ENST00000486429, ENST00000486975, NM_005602, uc003fgx.2, uc011bpt.1_5end |
EntrezGene: | CLDN11 |
HGNC: | 8514 |
UniProt: | O75508B4DFI2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.27e-26 | 121 |
muscle precursor cell | 4.52e-18 | 58 |
myoblast | 4.52e-18 | 58 |
multi-potent skeletal muscle stem cell | 4.52e-18 | 58 |
muscle cell | 6.83e-18 | 55 |
fibroblast | 2.38e-16 | 76 |
electrically responsive cell | 1.63e-15 | 61 |
electrically active cell | 1.63e-15 | 61 |
smooth muscle cell | 1.11e-13 | 43 |
smooth muscle myoblast | 1.11e-13 | 43 |
embryonic cell | 2.32e-10 | 250 |
lining cell | 4.69e-09 | 58 |
barrier cell | 4.69e-09 | 58 |
vascular associated smooth muscle cell | 1.68e-08 | 32 |
meso-epithelial cell | 1.85e-07 | 45 |
endothelial cell | 6.55e-07 | 36 |