FFCP PHASE1:Hg19::chr13:114554659..114554704,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2621 | |EntrezGene=2621 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=4168 | |HGNC=4168 | ||
|TSSclassifier=strong | |||
|UniProt=Q14393 | |UniProt=Q14393 | ||
|association_with_transcript=-491bp_to_AK126533_5end | |association_with_transcript=-491bp_to_AK126533_5end | ||
|cluster_id=chr13:114554659..114554704,- | |||
|coexpression_cluster_id=C2252 | |||
|description=CAGE_peak_3_at_GAS6_5end | |description=CAGE_peak_3_at_GAS6_5end | ||
|id=chr13:114554659..114554704,- | |id=chr13:114554659..114554704,- | ||
|ontology_enrichment_celltype=CL:0000057!1.05e-12!75;CL:0002620!5.13e-09!23;CL:0000055!3.15e-07!180 | |ontology_enrichment_celltype=CL:0000057!1.05e-12!75;CL:0002620!5.13e-09!23;CL:0000055!3.15e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.78e-08;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.50e-12,76;CL:0002620,2.82e-08,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.96e-15!365;UBERON:0001049!7.76e-14!57;UBERON:0005068!7.76e-14!57;UBERON:0006241!7.76e-14!57;UBERON:0007135!7.76e-14!57;UBERON:0002616!1.56e-13!59;UBERON:0003080!1.41e-12!42;UBERON:0002780!2.12e-12!41;UBERON:0001890!2.12e-12!41;UBERON:0006240!2.12e-12!41;UBERON:0000062!2.53e-12!511;UBERON:0004121!3.25e-12!169;UBERON:0000033!5.38e-12!123;UBERON:0000480!6.80e-12!626;UBERON:0000467!1.09e-11!625;UBERON:0000955!1.30e-11!69;UBERON:0006238!1.30e-11!69;UBERON:0002020!1.36e-11!34;UBERON:0003528!1.36e-11!34;UBERON:0000468!1.68e-11!659;UBERON:0007023!3.33e-11!115;UBERON:0000153!3.92e-11!129;UBERON:0007811!3.92e-11!129;UBERON:0000924!3.95e-11!173;UBERON:0006601!3.95e-11!173;UBERON:0001893!5.79e-11!34;UBERON:0003075!7.38e-11!86;UBERON:0007284!7.38e-11!86;UBERON:0001017!7.43e-11!82;UBERON:0002791!8.42e-11!33;UBERON:0003102!1.87e-10!95;UBERON:0001869!2.74e-10!32;UBERON:0005743!3.80e-10!86;UBERON:0000073!7.24e-10!94;UBERON:0001016!7.24e-10!94;UBERON:0002346!2.07e-09!90;UBERON:0003056!6.35e-09!61;UBERON:0000956!2.59e-08!25;UBERON:0000203!2.59e-08!25;UBERON:0002619!1.86e-07!22;UBERON:0000481!2.34e-07!347;UBERON:0000483!2.52e-07!309;UBERON:0000119!6.30e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;7.81e-10;34!UBERON:0002020;7.81e-10;34!UBERON:0002791;5.63e-09;32!UBERON:0002780;6.89e-09;41!UBERON:0001890;6.89e-09;41!UBERON:0001869;8.64e-09;32!UBERON:0001893;9.30e-09;34!UBERON:0000956;6.08e-08;25!UBERON:0000203;6.08e-08;25!UBERON:0000073;7.91e-08;53!UBERON:0002616;7.91e-08;53!UBERON:0002619;1.83e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.92e-14,56;UBERON:0005068,1.92e-14,56;UBERON:0006241,1.92e-14,56;UBERON:0007135,1.92e-14,56;UBERON:0000073,8.67e-14,53;UBERON:0002616,8.67e-14,53;UBERON:0002780,1.94e-12,41;UBERON:0001890,1.94e-12,41;UBERON:0003080,1.94e-12,41;UBERON:0006240,1.94e-12,41;UBERON:0003528,1.76e-11,34;UBERON:0002020,1.76e-11,34;UBERON:0001893,9.18e-11,34;UBERON:0000955,1.43e-10,68;UBERON:0006238,1.43e-10,68;UBERON:0001017,2.55e-10,81;UBERON:0002791,2.70e-10,32;UBERON:0003075,5.70e-10,82;UBERON:0007284,5.70e-10,82;UBERON:0001869,6.50e-10,32;UBERON:0001016,1.38e-09,89;UBERON:0007023,7.94e-09,114;UBERON:0002346,8.10e-09,86;UBERON:0010371,9.05e-09,104;UBERON:0004121,3.53e-08,171;UBERON:0000924,3.53e-08,171;UBERON:0006601,3.53e-08,171;UBERON:0000956,5.45e-08,25;UBERON:0000203,5.45e-08,25;UBERON:0003102,7.07e-08,99;UBERON:0002619,1.77e-07,22;UBERON:0003056,2.10e-07,61;UBERON:0010314,5.43e-07,132 | |||
|phase1_expression=9.81063248061006,10.4909256706582,3.52386010239928,6.00439790118782,1.34088328328186,5.23403114460221,0,0,0.261185628199839,0.737201809504527,0,0.655324116390517,0.263766978228454,0.247532705920093,0,0,0.602694528023977,0.730310090387373,1.95173119516203,0.369363174230364,0.408001382488506,0,0.85870796139317,3.42186062682211,3.89182182743889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,3.13481663935894,0.971680998056939,2.57575567634187,0,0.377875943688809,0,0.232429036905685,0,0.309706370895104,0.28769239232215,0.512321413058201,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0.329851300186716,0,0,0,0,0,1.00499466102697,1.0429658368404,0.217188844705117,0,0,0,0,0.212604299965044,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,2.89151321907653,0,4.20054904986389,0.795285947051099,0,0.472674085820339,0.221729397462564,0.614843499851882,1.70272798147026,0.364295288292542,0.370784442784429,0,1.0447784237956,1.32957960518865,3.10037811596945,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0.208994966536811,0,1.06729878806013,0.66944122552934,0.402829317109147,0,1.22031028774085,0,0.81014194788176,0.535798369704479,0.22452937262617,0.112611480483322,0,0,0,0,0,0.436094052142534,4.96971951695318,2.5326102332916,23.5688341847529,8.03142538096678,0.709336764396714,0.560677600142307,0,1.97334038733728,0,0.404132016209064,0.490385709340376,0,0.576175924479999,0,0.624320153660641,0,1.19558944441441,0.939475989150119,0.809364721840658,0.98315564691574,1.83738754129404,3.31652656741774,0.309977343527296,1.18800285728205,3.70900393917835,0,0.718618141816238,2.35670559535693,1.12606667884768,2.77064115484183,2.19488810440419,5.51678032438235,2.25357088359895,0.226864366320042,24.0382111823075,16.6574763278483,17.5903477962436,11.7035527472917,10.6144105115592,13.912589162464,6.32797311527405,24.4725681749836,3.80004320128675,26.0006787471438,15.2802831746217,1.61646056818812,18.1054892183473,4.53384442024381,3.05209066158878,0.773043412653187,2.72746120590835,0.573609190778008,0.243947412259191,0,0,0.310983165046111,0.252320850875628,1.82488679537915,0,1.92972281457866,0,3.71494342425583,0.721879481669586,0.236613600079688,0,0.241011029883482,0.330881918197182,0,0,0,0,0,0,0,0,0,5.07020139287323,0.982827216677626,1.77236972004421,0,2.33678033231916,0.343135620597051,1.31700342490351,0,2.91534019993729,0.925884451585296,0.325808305310325,0,1.44331342025273,0.463721619900307,0,0,0.925971025153221,0.190254152234598,0,0,1.23108503043699,0.234004265139238,0,0,2.01578553838631,1.84307626415102,1.07470227243418,1.74380363108377,0,0,0.088048434013226,0,0.144119953416961,0,0.63497894292169,0,0,0,0.308482478109971,0,0,0.224262168690721,0,0,3.74887975697556,0,0.845302752556,2.12750493267896,1.04007436911366,0,1.41849132023278,0,2.85955987316295,0,0,0.325736184293735,1.06617584622764,0,1.80863626235752,0.871533458600294,3.79897366491817,0,0,2.10833939483032,2.87549826589899,1.14861935834114,1.42636905040718,6.37037749337349,3.49309748335652,7.69962141931551,0,0,0,0,0,1.30139853857622,3.09315525111078,0.167516265334349,1.27587750330633,0,0,0,0.12269149171914,0,0.271265023699736,4.57535895367776,6.42344359669782,3.31175071571263,3.27995961979597,0,0,0,3.98535359121262,0,6.86380554297854,0,0,0,0.215714200818617,0.106727557803444,0,0,0,7.19512642674453,32.5339383370692,2.52594084989766,8.45718385087626,7.16390148693385,5.62988724002626,2.96836132889982,2.62156479464514,0.355123450626254,1.31403449622095,1.03850885836724,0.581051892299796,1.57117284469109,5.21316822788541,2.02578175658972,1.83703117063371,4.37018803216121,0.786746489756545,0,0.847168708148562,0,0,0.73886140225013,0,0.170093705276516,0.215915916102139,0,0.541892875087706,0,1.01950509218015,0.831076008928724,0.895499018888713,0,0,0.256450125116389,0,0,0.515205058238611,0,0,0.574265537996172,1.30012049207304,0,1.25671933779759,0.770243085573222,0.307007349452259,2.20538515975249,5.6932729780185,3.77043404176994,1.78975917573812,0.979352392114111,2.14870389969272,2.30628080838127,28.2024094613031,1.6185244936888,0,20.4628025439916,0,0,0,0,0,0,1.116475108079,1.89827654831236,2.85945290885737,0.255897791311334,0.42793898803392,0,0,9.53324025191568,3.0199073270966,2.82749765629647,0,0,0,2.43816869544795,1.94970791705028,0,1.63799893689583,1.83827061539827,0,0,1.32687795048244,0,1.15755106853338,0,0.202910376962704,0,0,2.72481569187698,0.491245205065606,0.35667105148125,0,0.844430541190656,3.29294892959902,0,0,0.192444225451024,0,0,0.0941438007767792,1.29151611801369,0,0,2.29723400206959,0,0,0,0,0,0,0,0,0.427296284509893,0,1.96032172784825,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21176150207399,2.42159648629257,0,0,0.921722292925374,0.223676107892416,1.16794399198336,0,0,0,0,0,0,0.561421621224659,0.73254089635947,0.121360521749513,0,0,0.71623345421307,0.890894042497916,1.84296421259539,1.9882952955326,3.657404826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|phase1_expression=9.81063248061006,10.4909256706582,3.52386010239928,6.00439790118782,1.34088328328186,5.23403114460221,0,0,0.261185628199839,0.737201809504527,0,0.655324116390517,0.263766978228454,0.247532705920093,0,0,0.602694528023977,0.730310090387373,1.95173119516203,0.369363174230364,0.408001382488506,0,0.85870796139317,3.42186062682211,3.89182182743889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,3.13481663935894,0.971680998056939,2.57575567634187,0,0.377875943688809,0,0.232429036905685,0,0.309706370895104,0.28769239232215,0.512321413058201,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0.329851300186716,0,0,0,0,0,1.00499466102697,1.0429658368404,0.217188844705117,0,0,0,0,0.212604299965044,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,2.89151321907653,0,4.20054904986389,0.795285947051099,0,0.472674085820339,0.221729397462564,0.614843499851882,1.70272798147026,0.364295288292542,0.370784442784429,0,1.0447784237956,1.32957960518865,3.10037811596945,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0.208994966536811,0,1.06729878806013,0.66944122552934,0.402829317109147,0,1.22031028774085,0,0.81014194788176,0.535798369704479,0.22452937262617,0.112611480483322,0,0,0,0,0,0.436094052142534,4.96971951695318,2.5326102332916,23.5688341847529,8.03142538096678,0.709336764396714,0.560677600142307,0,1.97334038733728,0,0.404132016209064,0.490385709340376,0,0.576175924479999,0,0.624320153660641,0,1.19558944441441,0.939475989150119,0.809364721840658,0.98315564691574,1.83738754129404,3.31652656741774,0.309977343527296,1.18800285728205,3.70900393917835,0,0.718618141816238,2.35670559535693,1.12606667884768,2.77064115484183,2.19488810440419,5.51678032438235,2.25357088359895,0.226864366320042,24.0382111823075,16.6574763278483,17.5903477962436,11.7035527472917,10.6144105115592,13.912589162464,6.32797311527405,24.4725681749836,3.80004320128675,26.0006787471438,15.2802831746217,1.61646056818812,18.1054892183473,4.53384442024381,3.05209066158878,0.773043412653187,2.72746120590835,0.573609190778008,0.243947412259191,0,0,0.310983165046111,0.252320850875628,1.82488679537915,0,1.92972281457866,0,3.71494342425583,0.721879481669586,0.236613600079688,0,0.241011029883482,0.330881918197182,0,0,0,0,0,0,0,0,0,5.07020139287323,0.982827216677626,1.77236972004421,0,2.33678033231916,0.343135620597051,1.31700342490351,0,2.91534019993729,0.925884451585296,0.325808305310325,0,1.44331342025273,0.463721619900307,0,0,0.925971025153221,0.190254152234598,0,0,1.23108503043699,0.234004265139238,0,0,2.01578553838631,1.84307626415102,1.07470227243418,1.74380363108377,0,0,0.088048434013226,0,0.144119953416961,0,0.63497894292169,0,0,0,0.308482478109971,0,0,0.224262168690721,0,0,3.74887975697556,0,0.845302752556,2.12750493267896,1.04007436911366,0,1.41849132023278,0,2.85955987316295,0,0,0.325736184293735,1.06617584622764,0,1.80863626235752,0.871533458600294,3.79897366491817,0,0,2.10833939483032,2.87549826589899,1.14861935834114,1.42636905040718,6.37037749337349,3.49309748335652,7.69962141931551,0,0,0,0,0,1.30139853857622,3.09315525111078,0.167516265334349,1.27587750330633,0,0,0,0.12269149171914,0,0.271265023699736,4.57535895367776,6.42344359669782,3.31175071571263,3.27995961979597,0,0,0,3.98535359121262,0,6.86380554297854,0,0,0,0.215714200818617,0.106727557803444,0,0,0,7.19512642674453,32.5339383370692,2.52594084989766,8.45718385087626,7.16390148693385,5.62988724002626,2.96836132889982,2.62156479464514,0.355123450626254,1.31403449622095,1.03850885836724,0.581051892299796,1.57117284469109,5.21316822788541,2.02578175658972,1.83703117063371,4.37018803216121,0.786746489756545,0,0.847168708148562,0,0,0.73886140225013,0,0.170093705276516,0.215915916102139,0,0.541892875087706,0,1.01950509218015,0.831076008928724,0.895499018888713,0,0,0.256450125116389,0,0,0.515205058238611,0,0,0.574265537996172,1.30012049207304,0,1.25671933779759,0.770243085573222,0.307007349452259,2.20538515975249,5.6932729780185,3.77043404176994,1.78975917573812,0.979352392114111,2.14870389969272,2.30628080838127,28.2024094613031,1.6185244936888,0,20.4628025439916,0,0,0,0,0,0,1.116475108079,1.89827654831236,2.85945290885737,0.255897791311334,0.42793898803392,0,0,9.53324025191568,3.0199073270966,2.82749765629647,0,0,0,2.43816869544795,1.94970791705028,0,1.63799893689583,1.83827061539827,0,0,1.32687795048244,0,1.15755106853338,0,0.202910376962704,0,0,2.72481569187698,0.491245205065606,0.35667105148125,0,0.844430541190656,3.29294892959902,0,0,0.192444225451024,0,0,0.0941438007767792,1.29151611801369,0,0,2.29723400206959,0,0,0,0,0,0,0,0,0.427296284509893,0,1.96032172784825,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21176150207399,2.42159648629257,0,0,0.921722292925374,0.223676107892416,1.16794399198336,0,0,0,0,0,0,0.561421621224659,0.73254089635947,0.121360521749513,0,0,0.71623345421307,0.890894042497916,1.84296421259539,1.9882952955326,3.657404826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| ||
|short_description=p3@GAS6 | |short_description=p3@GAS6 | ||
}} | }} |
Latest revision as of 16:51, 16 September 2015
Short description: | p3@GAS6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GAS6_5end |
Coexpression cluster: | C2252_Preadipocyte_Fibroblast_Small_mesenchymal_Smooth_mesothelioma_heart |
Association with transcript: | -491bp_to_AK126533_5end |
EntrezGene: | GAS6 |
HGNC: | 4168 |
UniProt: | Q14393 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.50e-12 | 76 |
skin fibroblast | 2.82e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
neural tube | 1.92e-14 | 56 |
neural rod | 1.92e-14 | 56 |
future spinal cord | 1.92e-14 | 56 |
neural keel | 1.92e-14 | 56 |
regional part of nervous system | 8.67e-14 | 53 |
regional part of brain | 8.67e-14 | 53 |
regional part of forebrain | 1.94e-12 | 41 |
forebrain | 1.94e-12 | 41 |
anterior neural tube | 1.94e-12 | 41 |
future forebrain | 1.94e-12 | 41 |
brain grey matter | 1.76e-11 | 34 |
gray matter | 1.76e-11 | 34 |
telencephalon | 9.18e-11 | 34 |
brain | 1.43e-10 | 68 |
future brain | 1.43e-10 | 68 |
central nervous system | 2.55e-10 | 81 |
regional part of telencephalon | 2.70e-10 | 32 |
neural plate | 5.70e-10 | 82 |
presumptive neural plate | 5.70e-10 | 82 |
cerebral hemisphere | 6.50e-10 | 32 |
nervous system | 1.38e-09 | 89 |
adult organism | 7.94e-09 | 114 |
neurectoderm | 8.10e-09 | 86 |
ecto-epithelium | 9.05e-09 | 104 |
ectoderm-derived structure | 3.53e-08 | 171 |
ectoderm | 3.53e-08 | 171 |
presumptive ectoderm | 3.53e-08 | 171 |
cerebral cortex | 5.45e-08 | 25 |
pallium | 5.45e-08 | 25 |
surface structure | 7.07e-08 | 99 |
regional part of cerebral cortex | 1.77e-07 | 22 |
pre-chordal neural plate | 2.10e-07 | 61 |
structure with developmental contribution from neural crest | 5.43e-07 | 132 |