FFCP PHASE1:Hg19::chr19:1908257..1908293,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=113178 | |EntrezGene=113178 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30385 | |HGNC=30385 | ||
|TSSclassifier=strong | |||
|UniProt=C9JWM2 | |UniProt=C9JWM2 | ||
|association_with_transcript=0bp_to_ENST00000411971_5end | |association_with_transcript=0bp_to_ENST00000411971_5end | ||
|cluster_id=chr19:1908257..1908293,+ | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_6_at_SCAMP4_5end | |description=CAGE_peak_6_at_SCAMP4_5end | ||
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|ontology_enrichment_celltype=CL:0000784!3.44e-11!3 | |ontology_enrichment_celltype=CL:0000784!3.44e-11!3 | ||
|ontology_enrichment_celltype_v019=CL:0000784;8.69e-41;3!CL:0000451;1.27e-11;10 | |ontology_enrichment_celltype_v019=CL:0000784;8.69e-41;3!CL:0000451;1.27e-11;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000784,1.31e-40,3;CL:0000451,1.42e-11,10 | |||
|ontology_enrichment_development_v019=UBERON:0005425;4.72e-15;1!UBERON:0006222;1.97e-14;1!UBERON:0006601;2.01e-07;82 | |ontology_enrichment_development_v019=UBERON:0005425;4.72e-15;1!UBERON:0006222;1.97e-14;1!UBERON:0006601;2.01e-07;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.47e-52!115;UBERON:0001049!2.13e-48!57;UBERON:0005068!2.13e-48!57;UBERON:0006241!2.13e-48!57;UBERON:0007135!2.13e-48!57;UBERON:0002616!3.25e-43!59;UBERON:0000955!6.80e-38!69;UBERON:0006238!6.80e-38!69;UBERON:0001017!2.87e-35!82;UBERON:0002780!6.02e-34!41;UBERON:0001890!6.02e-34!41;UBERON:0006240!6.02e-34!41;UBERON:0005743!3.02e-33!86;UBERON:0003080!5.20e-33!42;UBERON:0000073!1.66e-31!94;UBERON:0001016!1.66e-31!94;UBERON:0003075!2.03e-31!86;UBERON:0007284!2.03e-31!86;UBERON:0001893!7.45e-31!34;UBERON:0002020!9.15e-31!34;UBERON:0003528!9.15e-31!34;UBERON:0002346!1.20e-29!90;UBERON:0002791!1.73e-28!33;UBERON:0001869!5.03e-26!32;UBERON:0000033!2.01e-25!123;UBERON:0000153!2.32e-25!129;UBERON:0007811!2.32e-25!129;UBERON:0002308!1.58e-21!9;UBERON:0000125!1.58e-21!9;UBERON:0003056!5.54e-21!61;UBERON:0002298!8.34e-20!8;UBERON:0004121!1.33e-19!169;UBERON:0004732!3.71e-19!13;UBERON:0000924!6.33e-19!173;UBERON:0006601!6.33e-19!173;UBERON:0001950!9.14e-19!20;UBERON:0002619!6.82e-17!22;UBERON:0004733!2.34e-16!12;UBERON:0002028!2.34e-16!12;UBERON:0007277!2.34e-16!12;UBERON:0003076!2.79e-16!15;UBERON:0003057!2.79e-16!15;UBERON:0009663!1.20e-15!7;UBERON:0000956!1.26e-14!25;UBERON:0000203!1.26e-14!25;UBERON:0000025!9.78e-14!194;UBERON:0004111!1.82e-13!241;UBERON:0000200!1.05e-12!6;UBERON:0002420!5.16e-12!9;UBERON:0007245!5.16e-12!9;UBERON:0010009!5.16e-12!9;UBERON:0010011!5.16e-12!9;UBERON:0000454!5.16e-12!9;UBERON:0000988!6.00e-11!3;UBERON:0006331!7.54e-11!3;UBERON:0001896!1.69e-10!3;UBERON:0005290!1.69e-10!3;UBERON:0010096!1.69e-10!3;UBERON:0000477!1.75e-10!286;UBERON:0002771!1.94e-09!3;UBERON:0002680!5.34e-09!9;UBERON:0001895!5.34e-09!9;UBERON:0010092!5.34e-09!9;UBERON:0000064!1.46e-08!219;UBERON:0000475!2.46e-08!365;UBERON:0005162!3.79e-08!2;UBERON:0000122!3.79e-08!2;UBERON:0002148!9.59e-08!2;UBERON:0009662!9.59e-08!2;UBERON:0000062!1.47e-07!511;UBERON:0001897!1.51e-07!2;UBERON:0000369!2.00e-07!4;UBERON:0002435!2.00e-07!4;UBERON:0000204!2.00e-07!4;UBERON:0010082!2.00e-07!4;UBERON:0001875!3.23e-07!2;UBERON:0006514!3.23e-07!2;UBERON:0000483!5.38e-07!309;UBERON:0000119!7.66e-07!312 | |ontology_enrichment_uberon=UBERON:0007023!3.47e-52!115;UBERON:0001049!2.13e-48!57;UBERON:0005068!2.13e-48!57;UBERON:0006241!2.13e-48!57;UBERON:0007135!2.13e-48!57;UBERON:0002616!3.25e-43!59;UBERON:0000955!6.80e-38!69;UBERON:0006238!6.80e-38!69;UBERON:0001017!2.87e-35!82;UBERON:0002780!6.02e-34!41;UBERON:0001890!6.02e-34!41;UBERON:0006240!6.02e-34!41;UBERON:0005743!3.02e-33!86;UBERON:0003080!5.20e-33!42;UBERON:0000073!1.66e-31!94;UBERON:0001016!1.66e-31!94;UBERON:0003075!2.03e-31!86;UBERON:0007284!2.03e-31!86;UBERON:0001893!7.45e-31!34;UBERON:0002020!9.15e-31!34;UBERON:0003528!9.15e-31!34;UBERON:0002346!1.20e-29!90;UBERON:0002791!1.73e-28!33;UBERON:0001869!5.03e-26!32;UBERON:0000033!2.01e-25!123;UBERON:0000153!2.32e-25!129;UBERON:0007811!2.32e-25!129;UBERON:0002308!1.58e-21!9;UBERON:0000125!1.58e-21!9;UBERON:0003056!5.54e-21!61;UBERON:0002298!8.34e-20!8;UBERON:0004121!1.33e-19!169;UBERON:0004732!3.71e-19!13;UBERON:0000924!6.33e-19!173;UBERON:0006601!6.33e-19!173;UBERON:0001950!9.14e-19!20;UBERON:0002619!6.82e-17!22;UBERON:0004733!2.34e-16!12;UBERON:0002028!2.34e-16!12;UBERON:0007277!2.34e-16!12;UBERON:0003076!2.79e-16!15;UBERON:0003057!2.79e-16!15;UBERON:0009663!1.20e-15!7;UBERON:0000956!1.26e-14!25;UBERON:0000203!1.26e-14!25;UBERON:0000025!9.78e-14!194;UBERON:0004111!1.82e-13!241;UBERON:0000200!1.05e-12!6;UBERON:0002420!5.16e-12!9;UBERON:0007245!5.16e-12!9;UBERON:0010009!5.16e-12!9;UBERON:0010011!5.16e-12!9;UBERON:0000454!5.16e-12!9;UBERON:0000988!6.00e-11!3;UBERON:0006331!7.54e-11!3;UBERON:0001896!1.69e-10!3;UBERON:0005290!1.69e-10!3;UBERON:0010096!1.69e-10!3;UBERON:0000477!1.75e-10!286;UBERON:0002771!1.94e-09!3;UBERON:0002680!5.34e-09!9;UBERON:0001895!5.34e-09!9;UBERON:0010092!5.34e-09!9;UBERON:0000064!1.46e-08!219;UBERON:0000475!2.46e-08!365;UBERON:0005162!3.79e-08!2;UBERON:0000122!3.79e-08!2;UBERON:0002148!9.59e-08!2;UBERON:0009662!9.59e-08!2;UBERON:0000062!1.47e-07!511;UBERON:0001897!1.51e-07!2;UBERON:0000369!2.00e-07!4;UBERON:0002435!2.00e-07!4;UBERON:0000204!2.00e-07!4;UBERON:0010082!2.00e-07!4;UBERON:0001875!3.23e-07!2;UBERON:0006514!3.23e-07!2;UBERON:0000483!5.38e-07!309;UBERON:0000119!7.66e-07!312 | ||
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|short_description=p6@SCAMP4 | |short_description=p6@SCAMP4 | ||
}} | }} |
Latest revision as of 19:08, 16 September 2015
Short description: | p6@SCAMP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SCAMP4_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000411971_5end |
EntrezGene: | SCAMP4 |
HGNC: | 30385 |
UniProt: | C9JWM2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 1.31e-40 | 3 |
dendritic cell | 1.42e-11 | 10 |