FFCP PHASE1:Hg19::chr13:32605298..32605325,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10129 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20367 | |||
|TSSclassifier=strong | |||
|UniProt=F8WC26,Q5TBA9,F8W6Q0 | |||
|association_with_transcript=-111bp_to_ENST00000380235,ENST00000380250,ENST00000380257,NM_023037,uc001utx.2,uc010tdw.1_5end | |||
|cluster_id=chr13:32605298..32605325,+ | |||
|description=CAGE_peak_4_at_FRY_5end | |||
|id=chr13:32605298..32605325,+ | |||
|ontology_enrichment_celltype=CL:0000763!7.40e-32!112;CL:0000049!7.40e-32!112;CL:0000037!2.64e-30!172;CL:0000566!2.64e-30!172;CL:0000766!5.07e-30!76;CL:0002032!8.85e-28!165;CL:0000837!8.85e-28!165;CL:0000988!2.82e-27!182;CL:0002057!1.09e-26!42;CL:0000557!1.28e-25!71;CL:0000839!2.35e-25!70;CL:0000738!4.34e-25!140;CL:0000860!2.44e-23!45;CL:0002009!6.26e-22!65;CL:0002194!1.58e-21!63;CL:0000576!1.58e-21!63;CL:0000040!1.58e-21!63;CL:0000559!1.58e-21!63;CL:0002031!2.09e-20!124;CL:0002087!3.51e-18!119;CL:0000094!3.03e-07!8;CL:0002393!8.82e-07!9;CL:0002397!8.82e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.71e-28;33!CL:0002057;3.71e-28;33!CL:0000576;1.39e-27;48!CL:0000766;1.71e-21;69!CL:0000473;1.03e-19;39!CL:0000234;1.03e-19;39!CL:0000763;1.91e-16;100!CL:0000094;6.65e-10;8!CL:0002087;1.49e-08;104!CL:0000738;1.84e-07;136!CL:0002393;8.13e-07;6!CL:0002397;8.13e-07;6!CL:0000988;9.42e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,9.46e-49,108;CL:0000049,9.46e-49,108;CL:0000766,5.97e-47,72;CL:0000839,8.49e-40,66;CL:0000557,3.40e-39,67;CL:0000037,4.07e-39,168;CL:0000860,9.36e-39,42;CL:0002057,9.36e-39,42;CL:0000988,2.33e-35,177;CL:0002032,2.78e-35,161;CL:0000837,2.78e-35,161;CL:0002194,5.59e-34,59;CL:0000576,5.59e-34,59;CL:0000040,5.59e-34,59;CL:0000559,5.59e-34,59;CL:0002009,1.37e-33,61;CL:0000473,2.89e-33,48;CL:0000234,2.89e-33,48;CL:0000738,5.27e-31,136;CL:0002031,1.50e-24,120;CL:0002087,1.20e-21,115;CL:0000094,5.76e-10,8;CL:0002393,2.77e-09,9;CL:0002397,2.77e-09,9 | |||
|ontology_enrichment_development_v019=CL:0002057;9.06e-28;42!CL:0000049;1.20e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8692;5.88e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.28e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.43e-28!102;UBERON:0003061!1.43e-28!102;UBERON:0007023!2.69e-27!115;UBERON:0002193!4.09e-24!112;UBERON:0002371!3.97e-22!80;UBERON:0001474!2.34e-20!86;UBERON:0001049!2.42e-18!57;UBERON:0005068!2.42e-18!57;UBERON:0006241!2.42e-18!57;UBERON:0007135!2.42e-18!57;UBERON:0002780!1.77e-17!41;UBERON:0001890!1.77e-17!41;UBERON:0006240!1.77e-17!41;UBERON:0003080!1.24e-16!42;UBERON:0004765!7.81e-16!101;UBERON:0001434!7.81e-16!101;UBERON:0002616!1.51e-15!59;UBERON:0001893!2.12e-15!34;UBERON:0002020!3.91e-15!34;UBERON:0003528!3.91e-15!34;UBERON:0002791!8.08e-15!33;UBERON:0001869!1.00e-14!32;UBERON:0001017!1.77e-14!82;UBERON:0005743!6.33e-14!86;UBERON:0002619!1.23e-13!22;UBERON:0002405!1.24e-13!115;UBERON:0000073!2.07e-13!94;UBERON:0001016!2.07e-13!94;UBERON:0000955!2.72e-13!69;UBERON:0006238!2.72e-13!69;UBERON:0001950!2.17e-12!20;UBERON:0000956!2.20e-11!25;UBERON:0000203!2.20e-11!25;UBERON:0003075!1.72e-09!86;UBERON:0007284!1.72e-09!86;UBERON:0002346!1.28e-08!90;UBERON:0003056!4.01e-08!61;UBERON:0000178!5.03e-07!15;UBERON:0000179!5.03e-07!15;UBERON:0000463!5.03e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.86e-19;22!UBERON:0001869;1.03e-18;32!UBERON:0001893;1.50e-18;34!UBERON:0003528;2.17e-18;34!UBERON:0002020;2.17e-18;34!UBERON:0002791;2.38e-18;32!UBERON:0002780;9.60e-18;41!UBERON:0001890;9.60e-18;41!UBERON:0001950;2.20e-17;20!UBERON:0000956;4.24e-16;25!UBERON:0000203;4.24e-16;25!UBERON:0000073;1.34e-14;53!UBERON:0002616;1.34e-14;53!UBERON:0000955;3.54e-08;68!UBERON:0001017;6.32e-08;75!UBERON:0000178;1.25e-07;15!UBERON:0000179;1.25e-07;15!UBERON:0000463;1.25e-07;15!UBERON:0002420;4.53e-07;9!UBERON:0007245;4.53e-07;9!UBERON:0010009;4.53e-07;9!UBERON:0010011;4.53e-07;9!UBERON:0000454;4.53e-07;9!UBERON:0000125;7.46e-07;9!UBERON:0002308;7.46e-07;9!UBERON:0001016;9.49e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.13e-41,98;UBERON:0003061,4.13e-41,98;UBERON:0002193,7.91e-35,108;UBERON:0002371,1.36e-33,76;UBERON:0001474,1.40e-29,82;UBERON:0002405,6.07e-28,93;UBERON:0000073,7.34e-26,53;UBERON:0002616,7.34e-26,53;UBERON:0004765,4.15e-25,90;UBERON:0001049,5.41e-25,56;UBERON:0005068,5.41e-25,56;UBERON:0006241,5.41e-25,56;UBERON:0007135,5.41e-25,56;UBERON:0002780,3.36e-24,41;UBERON:0001890,3.36e-24,41;UBERON:0003080,3.36e-24,41;UBERON:0006240,3.36e-24,41;UBERON:0007023,3.45e-22,114;UBERON:0001893,3.66e-22,34;UBERON:0003528,9.11e-22,34;UBERON:0002020,9.11e-22,34;UBERON:0001434,1.86e-21,100;UBERON:0001869,3.66e-21,32;UBERON:0002791,1.22e-20,32;UBERON:0002619,2.09e-19,22;UBERON:0000955,1.97e-18,68;UBERON:0006238,1.97e-18,68;UBERON:0001017,4.49e-18,81;UBERON:0001950,1.46e-17,20;UBERON:0000956,3.24e-16,25;UBERON:0000203,3.24e-16,25;UBERON:0001016,1.84e-15,89;UBERON:0003075,5.32e-14,82;UBERON:0007284,5.32e-14,82;UBERON:0003056,3.18e-13,61;UBERON:0002346,1.08e-12,86;UBERON:0003081,8.72e-11,203;UBERON:0010371,1.01e-08,104;UBERON:0000178,1.02e-07,15;UBERON:0000179,1.02e-07,15;UBERON:0000463,1.02e-07,15;UBERON:0002420,2.78e-07,9;UBERON:0007245,2.78e-07,9;UBERON:0010009,2.78e-07,9;UBERON:0010011,2.78e-07,9;UBERON:0000454,2.78e-07,9;UBERON:0002204,4.03e-07,167;UBERON:0000125,5.22e-07,9;UBERON:0002308,5.22e-07,9 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.0764134057479513,0,0,7.86728553697808,2.68680578668049,7.27635779585557,0,0,0,1.47187681102573,1.56386155736164,4.69760702935756,7.20194031091441,7.62068900386538,3.47217393145363,2.68698569087909,1.29557466407592,2.06060454107349,11.1956643860265,5.29026321164333,11.4014508758274,5.11343881192506,3.28934310417461,4.33588919253145,3.74000110018796,3.33008918487831,5.67557351732605,2.41321976515633,5.16387746867061,5.41705946377367,5.08254316765033,3.0019676506363,5.16864014223695,5.20342617030534,3.53021929783703,4.47535988059329,4.28806690242731,3.39088217956774,6.39337125799041,7.2552309657146,1.70215567407342,6.85104473895132,6.78371396193207,3.12889751052121,4.12658804939722,3.02699751316684,6.99727508376373,5.69632297393592,5.70389273042243,3.61427309940574,3.56419697364239,10.3342340654775,7.80919842775833,9.96498637521897,3.70516566863623,3.77941686678271,5.11459630540975,0,0,0,2.13365111283254,0,0,0.661044872784862,0,1.70763890732835,2.34894875748376,0.764546456250458,9.25199300053181,9.52864557068611,2.63384084775077,2.360517241366,0.393010762749165,1.85041349099558,0,0,1.4203434172042,0,2.89667187901451,0.294605907474837,0,0.270803863765016,1.5370958367081,1.8208308658383,1.31550323682941,1.65810010671509,1.15921234294021,4.30031033169975,3.47803076516627,5.22677619024884,0.339928028092699,0.383220493601921,0.34362744548263,1.01207876807801,1.59282707162048,0,0,1.20460095262218,0.76791966692651,1.24930726552346,0.710331756132051,0,0.604820229674197,0.534880391567015,0.289648807765598,0,0,0,0,0,0,0,0.973269740605272,0,0,0,0.982343066232845,0,0,0.649094787309367,0.348259474598534,0,2.14641561874808,1.14398982156026,5.20040501861391,0,0,0,0,0,0,0.208994966536811,0,0,0.66944122552934,0,0,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0,7.9068250461638,7.75560528296651,0,0.496971951695318,0.12663051166458,0.264818361626438,0,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.989067717114227,0,0,0,0,0,0,0.30648779579902,0.300476117813194,0,0.179389635688862,0.213557388818567,0,0,0,0.772921620136887,0.18611685633159,0.337552664482532,0,0,0.0920498986422993,0,0,0,0.339121184620975,0,0,0,0,0,0.116193942869518,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587043471179108,0,0,0,0,0,0,0.702012795417713,0.594524649154913,0,0,0,0,0,0,2.95597942737566,3.96217953059517,5.59785911960085,8.35895729818376,5.0496973370552,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0,0.904902010304444,0,0,0.797814349754612,1.04007436911366,0,0,0,0.285955987316295,0,0,0,0,0.791951872933429,0.602878754119172,0,0,0,1.50677127429638,0,0,0,0,0,0.205476322550383,0,0,1.37921532141349,2.15627574859517,0.77005821767849,0.254094624222463,1.30139853857622,0,3.18280904135263,1.27587750330633,13.4821264310493,23.932916736322,20.3063601583657,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.260650843404249,0,0,7.44364894042395,5.39285502046542,2.56146138728266,0,0,0,0,0.767309866440312,0,0.128139149255701,0,0.482561763430822,0,0,0,0,0,0,0,0,0.0920809889358963,1.37777337797528,1.0925470080403,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75407901316748,3.39866086332371,0.256450125116389,0,0,0.103041011647722,0.27470839445503,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.623224249527161,0,0,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0,0.190630193923825,0,0.42793898803392,0,0,1.07923474549989,0.54907405947211,0,0,0,0,0.48763373908959,0,0,2.04749867111979,0.989838023675989,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0.294747123039363,0,0.709522128141196,0.422215270595328,0.329294892959902,0,0,0,0,0,0.282431402330337,0,0,0,0,6.5968189200182,12.234195314278,9.68400218196076,5.95579438644473,5.75907182320672,5.18778648954174,10.2605973075242,1.58625035258854,0,0,0.490080431962063,0.185803175125719,0,1.77854608371035,0.478278818186467,0.399158742865633,2.10655907145603,3.17510374085824,0,5.89674074038263,0,3.76031749855256,5.01268954180134,0,8.35057990539238,9.28278653078819,20.4406194091357,8.93113896364988,7.98825987201991,8.72336820780422,10.3446467861383,1.56310476321632,0.278406173895242,0,0,0,1.4098700508785,0,0.293016358543788,0,0,0,0,0,0,1.9882952955326,4.3607519087259,0.111308705022906,0,0.211125408127993,1.59398390600856,1.38141957765574,0,0.102268682502155,0,0,0,0,13.3008816258987,1.28236427328014,0,0,0.969332746095218,2.50473865036998,1.99613798001194,0.260427761085233,0.0874599999961957,0,0.1137934482855,0,0,0,0,0,2.65722415744152,3.73848959738765,3.05163472634166,1.21637185924347,0.591095237907095,1.97446857438575,0.10893846351899,0,1.38510465306835,0.341826167541004,0.23056390438806,0,0,0,0.274792780205587,0,0,2.82564461511045,2.6593869104025,0,0,0,0,4.13235105348985,0,0,0.141353071433941,0,0.995261931078505,0.973033209536731,0,0.296521128680622,0.247127877893006,0.417687798021821,2.69604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| |||
|short_description=p4@FRY | |||
}} |
Latest revision as of 03:33, 17 September 2015
Short description: | p4@FRY |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FRY_5end |
Coexpression cluster: | NA |
Association with transcript: | -111bp_to_ENST00000380235, ENST00000380250, ENST00000380257, NM_023037, uc001utx.2, uc010tdw.1_5end |
EntrezGene: | FRY |
HGNC: | 20367 |
UniProt: | F8WC26Q5TBA9F8W6Q0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 9.46e-49 | 108 |
common myeloid progenitor | 9.46e-49 | 108 |
myeloid leukocyte | 5.97e-47 | 72 |
myeloid lineage restricted progenitor cell | 8.49e-40 | 66 |
granulocyte monocyte progenitor cell | 3.40e-39 | 67 |
hematopoietic stem cell | 4.07e-39 | 168 |
classical monocyte | 9.36e-39 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.36e-39 | 42 |
hematopoietic cell | 2.33e-35 | 177 |
hematopoietic oligopotent progenitor cell | 2.78e-35 | 161 |
hematopoietic multipotent progenitor cell | 2.78e-35 | 161 |
monopoietic cell | 5.59e-34 | 59 |
monocyte | 5.59e-34 | 59 |
monoblast | 5.59e-34 | 59 |
promonocyte | 5.59e-34 | 59 |
macrophage dendritic cell progenitor | 1.37e-33 | 61 |
defensive cell | 2.89e-33 | 48 |
phagocyte | 2.89e-33 | 48 |
leukocyte | 5.27e-31 | 136 |
hematopoietic lineage restricted progenitor cell | 1.50e-24 | 120 |
nongranular leukocyte | 1.20e-21 | 115 |
granulocyte | 5.76e-10 | 8 |
intermediate monocyte | 2.77e-09 | 9 |
CD14-positive, CD16-positive monocyte | 2.77e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.28e-07 | 31 |