FFCP PHASE1:Hg19::chr1:26232902..26232918,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:26232902..26232918,-
|short_description=p1@STMN1
|description=CAGE_peak_1_at_STMN1_5end
|association_with_transcript=0bp_to_ENST00000465604_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3925 | |EntrezGene=3925 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6510 | |HGNC=6510 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000465604_5end | |||
|cluster_id=chr1:26232902..26232918,- | |||
|coexpression_cluster_id=C3962 | |||
|description=CAGE_peak_1_at_STMN1_5end | |||
|id=chr1:26232902..26232918,- | |||
|ontology_enrichment_celltype=CL:0002319!3.54e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002319;3.43e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.54e-07,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!5.23e-22!235;DOID:14566!4.89e-21!239;DOID:2531!3.08e-17!51;DOID:0060083!3.08e-17!51;DOID:0050686!1.93e-16!137;DOID:1240!9.92e-16!39;DOID:8692!6.80e-12!31;DOID:0050687!2.00e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.42e-12;39!DOID:8692;1.25e-11;31!DOID:2531;2.63e-11;51!DOID:0060083;2.63e-11;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,5.23e-22,235;DOID:14566,4.89e-21,239;DOID:2531,3.08e-17,51;DOID:0060083,3.08e-17,51;DOID:0050686,1.93e-16,137;DOID:1240,9.92e-16,39;DOID:8692,6.80e-12,31;DOID:0050687,2.00e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000073!3.14e-21!94;UBERON:0001016!3.14e-21!94;UBERON:0001017!1.76e-19!82;UBERON:0005743!2.02e-19!86;UBERON:0000955!1.19e-15!69;UBERON:0006238!1.19e-15!69;UBERON:0000924!8.51e-15!173;UBERON:0006601!8.51e-15!173;UBERON:0001049!3.21e-14!57;UBERON:0005068!3.21e-14!57;UBERON:0006241!3.21e-14!57;UBERON:0007135!3.21e-14!57;UBERON:0004121!5.10e-14!169;UBERON:0002346!6.74e-14!90;UBERON:0003075!4.29e-13!86;UBERON:0007284!4.29e-13!86;UBERON:0002780!1.29e-12!41;UBERON:0001890!1.29e-12!41;UBERON:0006240!1.29e-12!41;UBERON:0003056!1.32e-12!61;UBERON:0002616!1.32e-12!59;UBERON:0000153!2.22e-12!129;UBERON:0007811!2.22e-12!129;UBERON:0000033!4.84e-12!123;UBERON:0003080!6.43e-12!42;UBERON:0001893!1.20e-11!34;UBERON:0002791!3.90e-11!33;UBERON:0002020!4.79e-11!34;UBERON:0003528!4.79e-11!34;UBERON:0000956!6.97e-11!25;UBERON:0000203!6.97e-11!25;UBERON:0001869!7.39e-11!32;UBERON:0001950!5.94e-10!20;UBERON:0002619!9.92e-10!22;UBERON:0000119!5.17e-08!312;UBERON:0000064!1.02e-07!219;UBERON:0000483!2.09e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;6.86e-11;25!UBERON:0000203;6.86e-11;25!UBERON:0001893;2.36e-10;34!UBERON:0001869;4.71e-10;32!UBERON:0001950;5.84e-10;20!UBERON:0003528;8.66e-10;34!UBERON:0002020;8.66e-10;34!UBERON:0002791;9.58e-10;32!UBERON:0002619;9.69e-10;22!UBERON:0002780;5.23e-09;41!UBERON:0001890;5.23e-09;41!UBERON:0000073;2.44e-08;53!UBERON:0002616;2.44e-08;53!UBERON:0000955;7.29e-08;68!UBERON:0001016;8.58e-08;83!UBERON:0001017;1.76e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.65e-22,89;UBERON:0001017,4.10e-20,81;UBERON:0000955,2.95e-16,68;UBERON:0006238,2.95e-16,68;UBERON:0001049,7.22e-15,56;UBERON:0005068,7.22e-15,56;UBERON:0006241,7.22e-15,56;UBERON:0007135,7.22e-15,56;UBERON:0002346,8.35e-15,86;UBERON:0004121,9.31e-15,171;UBERON:0000924,9.31e-15,171;UBERON:0006601,9.31e-15,171;UBERON:0003075,5.46e-14,82;UBERON:0007284,5.46e-14,82;UBERON:0000073,6.92e-14,53;UBERON:0002616,6.92e-14,53;UBERON:0003056,1.11e-13,61;UBERON:0002780,1.29e-12,41;UBERON:0001890,1.29e-12,41;UBERON:0003080,1.29e-12,41;UBERON:0006240,1.29e-12,41;UBERON:0001893,1.20e-11,34;UBERON:0010371,1.24e-11,104;UBERON:0011216,1.60e-11,223;UBERON:0003528,4.79e-11,34;UBERON:0002020,4.79e-11,34;UBERON:0000956,6.97e-11,25;UBERON:0000203,6.97e-11,25;UBERON:0001869,7.39e-11,32;UBERON:0002791,9.96e-11,32;UBERON:0010314,2.36e-10,132;UBERON:0001950,5.94e-10,20;UBERON:0002619,9.92e-10,22;UBERON:0000119,4.20e-08,309;UBERON:0000483,1.72e-07,306 | |||
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22258451951 | ||
|short_description=p1@STMN1 | |||
}} | }} |
Latest revision as of 04:20, 17 September 2015
Short description: | p1@STMN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_STMN1_5end |
Coexpression cluster: | C3962_occipital_brain_duodenum_merkel_Neurons_retinoblastoma_parietal |
Association with transcript: | 0bp_to_ENST00000465604_5end |
EntrezGene: | STMN1 |
HGNC: | 6510 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.54e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
cancer | 5.23e-22 | 235 |
disease of cellular proliferation | 4.89e-21 | 239 |
hematologic cancer | 3.08e-17 | 51 |
immune system cancer | 3.08e-17 | 51 |
organ system cancer | 1.93e-16 | 137 |
leukemia | 9.92e-16 | 39 |
myeloid leukemia | 6.80e-12 | 31 |
cell type cancer | 2.00e-07 | 143 |