FFCP PHASE1:Hg19::chr1:31381528..31381659,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9672 | |EntrezGene=9672 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10660 | |HGNC=10660 | ||
|TSSclassifier=strong | |||
|UniProt=O75056 | |UniProt=O75056 | ||
|association_with_transcript=0bp_to_ENST00000339394_5end | |association_with_transcript=0bp_to_ENST00000339394_5end | ||
|cluster_id=chr1:31381528..31381659,- | |||
|description=CAGE_peak_1_at_SDC3_5end | |description=CAGE_peak_1_at_SDC3_5end | ||
|id=chr1:31381528..31381659,- | |id=chr1:31381528..31381659,- | ||
|ontology_enrichment_celltype=CL:0000055!1.22e-12!180;CL:0000057!8.24e-07!75 | |ontology_enrichment_celltype=CL:0000055!1.22e-12!180;CL:0000057!8.24e-07!75 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.23e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.04e-31!365;UBERON:0000119!5.47e-28!312;UBERON:0003075!5.88e-28!86;UBERON:0007284!5.88e-28!86;UBERON:0004121!1.16e-27!169;UBERON:0000468!2.74e-27!659;UBERON:0001049!2.78e-27!57;UBERON:0005068!2.78e-27!57;UBERON:0006241!2.78e-27!57;UBERON:0007135!2.78e-27!57;UBERON:0000483!4.99e-27!309;UBERON:0001017!6.38e-27!82;UBERON:0000477!1.90e-26!286;UBERON:0005743!4.33e-26!86;UBERON:0000025!6.36e-26!194;UBERON:0000467!6.93e-26!625;UBERON:0004111!7.79e-26!241;UBERON:0000924!1.32e-25!173;UBERON:0006601!1.32e-25!173;UBERON:0002616!1.63e-25!59;UBERON:0000480!1.82e-25!626;UBERON:0002346!7.71e-25!90;UBERON:0000955!3.42e-24!69;UBERON:0006238!3.42e-24!69;UBERON:0000033!4.49e-23!123;UBERON:0000073!1.28e-22!94;UBERON:0001016!1.28e-22!94;UBERON:0000153!8.00e-21!129;UBERON:0007811!8.00e-21!129;UBERON:0000062!2.39e-20!511;UBERON:0000481!2.68e-20!347;UBERON:0002780!2.67e-19!41;UBERON:0001890!2.67e-19!41;UBERON:0006240!2.67e-19!41;UBERON:0003080!2.99e-19!42;UBERON:0003056!4.03e-19!61;UBERON:0000064!6.17e-19!219;UBERON:0002020!9.04e-19!34;UBERON:0003528!9.04e-19!34;UBERON:0000922!1.26e-18!612;UBERON:0001893!1.26e-18!34;UBERON:0002050!1.82e-18!605;UBERON:0005423!1.82e-18!605;UBERON:0002791!4.33e-18!33;UBERON:0000923!4.77e-18!604;UBERON:0005291!4.77e-18!604;UBERON:0006598!4.77e-18!604;UBERON:0002532!4.77e-18!604;UBERON:0001869!1.28e-17!32;UBERON:0007023!1.52e-16!115;UBERON:0000956!9.14e-14!25;UBERON:0000203!9.14e-14!25;UBERON:0002619!7.51e-13!22;UBERON:0001950!8.44e-12!20;UBERON:0003076!3.12e-09!15;UBERON:0003057!3.12e-09!15;UBERON:0004732!1.12e-07!13;UBERON:0003914!1.14e-07!118;UBERON:0004872!1.64e-07!84;UBERON:0004733!2.26e-07!12;UBERON:0002028!2.26e-07!12;UBERON:0007277!2.26e-07!12;UBERON:0003103!2.54e-07!69;UBERON:0002049!8.63e-07!79;UBERON:0007798!8.63e-07!79 | |ontology_enrichment_uberon=UBERON:0000475!1.04e-31!365;UBERON:0000119!5.47e-28!312;UBERON:0003075!5.88e-28!86;UBERON:0007284!5.88e-28!86;UBERON:0004121!1.16e-27!169;UBERON:0000468!2.74e-27!659;UBERON:0001049!2.78e-27!57;UBERON:0005068!2.78e-27!57;UBERON:0006241!2.78e-27!57;UBERON:0007135!2.78e-27!57;UBERON:0000483!4.99e-27!309;UBERON:0001017!6.38e-27!82;UBERON:0000477!1.90e-26!286;UBERON:0005743!4.33e-26!86;UBERON:0000025!6.36e-26!194;UBERON:0000467!6.93e-26!625;UBERON:0004111!7.79e-26!241;UBERON:0000924!1.32e-25!173;UBERON:0006601!1.32e-25!173;UBERON:0002616!1.63e-25!59;UBERON:0000480!1.82e-25!626;UBERON:0002346!7.71e-25!90;UBERON:0000955!3.42e-24!69;UBERON:0006238!3.42e-24!69;UBERON:0000033!4.49e-23!123;UBERON:0000073!1.28e-22!94;UBERON:0001016!1.28e-22!94;UBERON:0000153!8.00e-21!129;UBERON:0007811!8.00e-21!129;UBERON:0000062!2.39e-20!511;UBERON:0000481!2.68e-20!347;UBERON:0002780!2.67e-19!41;UBERON:0001890!2.67e-19!41;UBERON:0006240!2.67e-19!41;UBERON:0003080!2.99e-19!42;UBERON:0003056!4.03e-19!61;UBERON:0000064!6.17e-19!219;UBERON:0002020!9.04e-19!34;UBERON:0003528!9.04e-19!34;UBERON:0000922!1.26e-18!612;UBERON:0001893!1.26e-18!34;UBERON:0002050!1.82e-18!605;UBERON:0005423!1.82e-18!605;UBERON:0002791!4.33e-18!33;UBERON:0000923!4.77e-18!604;UBERON:0005291!4.77e-18!604;UBERON:0006598!4.77e-18!604;UBERON:0002532!4.77e-18!604;UBERON:0001869!1.28e-17!32;UBERON:0007023!1.52e-16!115;UBERON:0000956!9.14e-14!25;UBERON:0000203!9.14e-14!25;UBERON:0002619!7.51e-13!22;UBERON:0001950!8.44e-12!20;UBERON:0003076!3.12e-09!15;UBERON:0003057!3.12e-09!15;UBERON:0004732!1.12e-07!13;UBERON:0003914!1.14e-07!118;UBERON:0004872!1.64e-07!84;UBERON:0004733!2.26e-07!12;UBERON:0002028!2.26e-07!12;UBERON:0007277!2.26e-07!12;UBERON:0003103!2.54e-07!69;UBERON:0002049!8.63e-07!79;UBERON:0007798!8.63e-07!79 | ||
|ontology_enrichment_uberon_v019=UBERON:0003528;3.69e-16;34!UBERON:0002020;3.69e-16;34!UBERON:0001893;4.50e-16;34!UBERON:0001869;5.09e-16;32!UBERON:0002791;5.17e-16;32!UBERON:0000073;1.49e-14;53!UBERON:0002616;1.49e-14;53!UBERON:0002780;3.06e-14;41!UBERON:0001890;3.06e-14;41!UBERON:0000956;8.71e-14;25!UBERON:0000203;8.71e-14;25!UBERON:0002619;7.25e-13;22!UBERON:0001950;8.21e-12;20!UBERON:0000955;1.75e-11;68!UBERON:0001017;5.19e-11;75!UBERON:0001016;1.47e-09;83!UBERON:0004732;1.12e-07;13!UBERON:0004733;2.24e-07;12!UBERON:0002028;2.24e-07;12 | |||
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| ||
|short_description=p1@SDC3 | |short_description=p1@SDC3 | ||
}} | }} |
Latest revision as of 12:48, 17 September 2015
Short description: | p1@SDC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SDC3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000339394_5end |
EntrezGene: | SDC3 |
HGNC: | 10660 |
UniProt: | O75056 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.23e-07 | 76 |