FFCP PHASE1:Hg19::chr3:195306243..195306291,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=347 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=612 | |||
|TSSclassifier=strong | |||
|UniProt=P05090 | |||
|association_with_transcript=40bp_to_BT019860,BT019861,CR456838,CR541773,CU675645,DQ892668,DQ896124_5end | |||
|cluster_id=chr3:195306243..195306291,- | |||
|coexpression_cluster_id=C771 | |||
|description=CAGE_peak_3_at_APOD_5end | |||
|id=chr3:195306243..195306291,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.44e-14;82!UBERON:0002532;4.28e-07;206!UBERON:0010316;4.28e-07;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.83e-68!115;UBERON:0001049!2.18e-29!57;UBERON:0005068!2.18e-29!57;UBERON:0006241!2.18e-29!57;UBERON:0007135!2.18e-29!57;UBERON:0002616!1.98e-27!59;UBERON:0000955!6.56e-25!69;UBERON:0006238!6.56e-25!69;UBERON:0001017!9.53e-25!82;UBERON:0003080!5.64e-24!42;UBERON:0005743!6.72e-24!86;UBERON:0002346!1.33e-23!90;UBERON:0002780!5.37e-23!41;UBERON:0001890!5.37e-23!41;UBERON:0006240!5.37e-23!41;UBERON:0003075!6.60e-23!86;UBERON:0007284!6.60e-23!86;UBERON:0000073!1.73e-21!94;UBERON:0001016!1.73e-21!94;UBERON:0000153!1.10e-18!129;UBERON:0007811!1.10e-18!129;UBERON:0002020!4.87e-18!34;UBERON:0003528!4.87e-18!34;UBERON:0001893!5.88e-18!34;UBERON:0000033!9.44e-18!123;UBERON:0002791!2.67e-17!33;UBERON:0000924!6.48e-17!173;UBERON:0006601!6.48e-17!173;UBERON:0003056!8.39e-17!61;UBERON:0004121!3.38e-16!169;UBERON:0001869!3.56e-16!32;UBERON:0002619!6.01e-14!22;UBERON:0001950!1.72e-12!20;UBERON:0000956!1.86e-11!25;UBERON:0000203!1.86e-11!25;UBERON:0000468!2.46e-09!659;UBERON:0004111!2.62e-09!241;UBERON:0000475!4.16e-09!365;UBERON:0000477!4.20e-09!286;UBERON:0002298!1.48e-08!8;UBERON:0002308!1.62e-08!9;UBERON:0000125!1.62e-08!9;UBERON:0002420!2.15e-08!9;UBERON:0007245!2.15e-08!9;UBERON:0010009!2.15e-08!9;UBERON:0010011!2.15e-08!9;UBERON:0000454!2.15e-08!9;UBERON:0000064!4.89e-08!219;UBERON:0009663!7.26e-07!7;UBERON:0000467!7.37e-07!625;UBERON:0000480!9.03e-07!626;UBERON:0003076!9.90e-07!15;UBERON:0003057!9.90e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.45e-23;114!UBERON:0002780;9.03e-21;41!UBERON:0001890;9.03e-21;41!UBERON:0001893;2.33e-20;34!UBERON:0000073;4.50e-20;53!UBERON:0002616;4.50e-20;53!UBERON:0003528;1.05e-19;34!UBERON:0002020;1.05e-19;34!UBERON:0002791;3.77e-19;32!UBERON:0001869;8.32e-19;32!UBERON:0002619;4.82e-17;22!UBERON:0001017;1.19e-15;75!UBERON:0000955;4.49e-15;68!UBERON:0001950;5.53e-15;20!UBERON:0000956;2.09e-14;25!UBERON:0000203;2.09e-14;25!UBERON:0001016;9.18e-12;83!UBERON:0000125;1.50e-11;9!UBERON:0002308;1.50e-11;9!UBERON:0002420;2.33e-11;9!UBERON:0007245;2.33e-11;9!UBERON:0010009;2.33e-11;9!UBERON:0010011;2.33e-11;9!UBERON:0000454;2.33e-11;9!UBERON:0009663;3.44e-09;7!UBERON:0002298;1.03e-08;6!UBERON:0000200;3.68e-08;6!UBERON:0004732;9.03e-08;13!UBERON:0001894;2.75e-07;7!UBERON:0000349;9.44e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.94e-89,114;UBERON:0001049,2.22e-38,56;UBERON:0005068,2.22e-38,56;UBERON:0006241,2.22e-38,56;UBERON:0007135,2.22e-38,56;UBERON:0000073,1.04e-34,53;UBERON:0002616,1.04e-34,53;UBERON:0001017,4.94e-32,81;UBERON:0000955,8.25e-32,68;UBERON:0006238,8.25e-32,68;UBERON:0003075,2.66e-31,82;UBERON:0007284,2.66e-31,82;UBERON:0002346,2.55e-30,86;UBERON:0002780,1.59e-29,41;UBERON:0001890,1.59e-29,41;UBERON:0003080,1.59e-29,41;UBERON:0006240,1.59e-29,41;UBERON:0001016,8.51e-29,89;UBERON:0010371,2.76e-27,104;UBERON:0010314,4.50e-25,132;UBERON:0003528,8.95e-24,34;UBERON:0002020,8.95e-24,34;UBERON:0001893,1.17e-23,34;UBERON:0004121,1.58e-22,171;UBERON:0000924,1.58e-22,171;UBERON:0006601,1.58e-22,171;UBERON:0003056,9.36e-22,61;UBERON:0002791,1.61e-21,32;UBERON:0001869,4.01e-21,32;UBERON:0002619,4.74e-17,22;UBERON:0001950,5.41e-15,20;UBERON:0000956,2.06e-14,25;UBERON:0000203,2.06e-14,25;UBERON:0011216,1.87e-12,223;UBERON:0000125,1.23e-11,9;UBERON:0002308,1.23e-11,9;UBERON:0004111,1.70e-11,240;UBERON:0002420,1.87e-11,9;UBERON:0007245,1.87e-11,9;UBERON:0010009,1.87e-11,9;UBERON:0010011,1.87e-11,9;UBERON:0000454,1.87e-11,9;UBERON:0003076,7.19e-10,15;UBERON:0003057,7.19e-10,15;UBERON:0000025,1.82e-09,192;UBERON:0009663,2.99e-09,7;UBERON:0002298,1.04e-08,6;UBERON:0000200,3.22e-08,6;UBERON:0004732,9.08e-08,13;UBERON:0001894,2.51e-07,7;UBERON:0006222,2.51e-07,7;UBERON:0000483,4.30e-07,306;UBERON:0000119,7.43e-07,309;UBERON:0000349,7.87e-07,5 | |||
|phase1_expression=2.18014055124668,3.42560838225573,0.704772020479856,0,0.446961094427288,4.36169262050184,0,13.2661173419635,18.0218083457889,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96468613246569,0,0,0,0,0.132957960518865,0,0,0,0,0.860234595106124,0.347140501607594,0,0,0.275118041940067,0,0.258416759169329,0.35576626268671,0.33472061276467,1.20848795132744,0.760272105718513,7.32186172644509,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0.653847612453835,21.7954695808701,17.86145365888,0.234321431833797,2.49728061464256,0.570471821544449,17.1865982634571,0.469737994575059,1.61872944368132,0.842704840213491,3.67477508258808,0.122834317311768,11.2625101481584,0,0,0,0,0.168336113954066,1.37630371859161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.28735856063958,9.38443326170461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95172252503473,0.171567810298526,0,0,0,0.185176890317059,0.325808305310325,2.07986957055916,0,0,0,2.02113026865503,0.925971025153221,2.47330397904978,4.74122638775565,2.57545848628462,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0.12624243342638,0.126995788584338,0.381988425558278,1.17217447210047,0,3.39330725920968,7.20823338825402,2.00078502841405,0.112131084345361,0.87192013766656,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0.300946099727719,9.09630016223939,3.10419213877515,0,0.368738337083406,0.347534457872331,0,1.37257369524342,0,0,0,0,0,0.604780586659361,0.248107807818777,0,0,0.128139149255701,0,0.160853921143607,0,0,0.355123450626254,0,1.03850885836724,0.232420756919918,0.362578348774867,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,3.709476419318,0,0,0,1.95018073810956,0,0,0,0,0,0.107420244868274,0.145016693914229,0,0,0.826424576804891,3.45942121257191,0.255225424989168,1.0115778085555,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04980416073495,0,0,0,5.46034044505319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.0273414005906,0,0,0,0.23874448473769,0,0,5.96488588659779,7.87748731898871,0,0,0.211125408127993,12.1541272833153,0.552567831062295,0,0,0,0,0,0,0,14.1060070060815,0,0,8.72399471485697,14.9356638040581,1.99613798001194,2.08342208868187,0,29.7249825928265,0,0,0,0,0,0,5.31444831488303,6.87399700164825,0,4.53374965718021,6.50204761697804,9.87234287192876,0,0,7.61807559187591,0,0,0.538545866458633,0,3.50901275705111,0.457987967009312,2.13213910407454,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,1.99052386215701,3.00755719311353,0.611030144933625,0,0.370691816839509,0.522109747527277,11.5929948726765,1.60515529459758,14.7586600806964,9.1227394607833,0,0,8.2862724598372,0,0.30607276163049,5.18129952953601,0,0,0,0,0,0,0,0,0,0,0,8.03742673913339,0,0,0,0,13.0935172259366,0,18.5304207440037,0,0,3.03891820588218,0,0,2.77488893161158,0,0,0,0,0,0,0,0,0,0,0,2.40168115483916,12.0476733424954,0,0,1.05154941711726,7.81990723562312,3.20824593616357,4.30723814746088,11.3817030284425,38.6303443322914,12.274430159303,1.47803639470798,0,0,0,0,0,0,0,2.38568906942791,13.484137205046,0,0,0,0,0,2.18698403968889,0,0.394028536495991,0.157363764404994,0,0,0,22.1555551175744,68.8575649180049,0,0,0,0,0,0,0,0,0.146552233678082,1.32506888912221,5.55916712354667,13.6199579794971,0,0,2.66968531419237,0,1.24271716604159,1.9846640872478,0,0,0,1.08803560673895,1.7548292581589,1.22538230705385,0.655745261419609,0,3.54427271986794,37.7061158547066,6.50992839673799,8.027728739661,17.6377191943595,6.70641151766941,0,0.124980407962107,0,9.99128667407386,0,0,0,0,0.467426619694449,0,0,0,0,0.228840068396924,0.604923695052956,0,0,0,0,0.155262956876259,0.829412415681711,0,0,0,0,0.406870733204662,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.46595555219346,0,0,0.163565394255844,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0.425149840203366,0.247871528518004,0,0,0,0,0,0,2.89031512934068,4.25089728976755,10.0569331206005,8.40977093387096,0.252071696221718,4.35690690524573,8.07378228159256,21.4154130388732,0,0,0,0,0,0,0,2.03067886542995,0,10.1596821460302,2.88097363929565,0,0,3.57949198477492,3.12431239445539,9.92096623205684,3.7415328014405,0,6.030835435429,23.3219253842968,1.40696995487696,0.255524855279191,14.4639495687137,8.4070930554706,1.82089681270989,0.227662191351298,3.01588058552972,0,0,5.23366943921604,4.60409414939944,0,0,5.49451649953598,5.34193005714407,0,0,0,0,14.3667853795079,0,0,0,0,0,0,0,10.3254566116867,0.118332000730565,0,2.9637093513365,0,0,0,0,0,0,20.7177227900126,15.7074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| |||
|short_description=p3@APOD | |||
}} |
Latest revision as of 14:15, 17 September 2015
Short description: | p3@APOD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_APOD_5end |
Coexpression cluster: | C771_left_Fibroblast_pineal_adipose_breast_retina_skeletal |
Association with transcript: | 40bp_to_BT019860, BT019861, CR456838, CR541773, CU675645, DQ892668, DQ896124_5end |
EntrezGene: | APOD |
HGNC: | 612 |
UniProt: | P05090 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data