FFCP PHASE1:Hg19::chr20:62795799..62795819,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4661 | |EntrezGene=4661 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7622 | |HGNC=7622 | ||
|TSSclassifier=strong | |||
|UniProt=Q01538,F5H7M8,Q7Z5W2 | |UniProt=Q01538,F5H7M8,Q7Z5W2 | ||
|association_with_transcript=-7bp_to_ENST00000328439,ENST00000536311,NM_004535,uc002yii.2_5end | |association_with_transcript=-7bp_to_ENST00000328439,ENST00000536311,NM_004535,uc002yii.2_5end | ||
|cluster_id=chr20:62795799..62795819,+ | |||
|coexpression_cluster_id=C11 | |coexpression_cluster_id=C11 | ||
|description=CAGE_peak_1_at_MYT1_5end | |description=CAGE_peak_1_at_MYT1_5end | ||
|id=chr20:62795799..62795819,+ | |id=chr20:62795799..62795819,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype=CL:0002319!6.95e-07!25 | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_disease=DOID:3119;8.51e-07;14 | |ontology_enrichment_celltype_v019_2=CL:0000047,1.05e-07,8 | ||
|ontology_enrichment_uberon=UBERON:0004732;1.69e-22;13!UBERON:0000073;2.22e-22;53!UBERON:0002616;2.22e-22;53!UBERON:0004733;1.77e-19;12!UBERON:0002028;1.77e-19;12!UBERON:0001894;2.84e-18;7!UBERON:0002780;8.14e-16;41!UBERON:0001890;8.14e-16;41!UBERON:0001016;1.57e-15;83!UBERON:0002298;2.96e-15;6!UBERON:0002680;3.36e-15;9!UBERON:0001895;3.36e-15;9!UBERON:0002784;6.27e-15;4!UBERON:0000955;1.85e-14;68!UBERON:0001017;1.13e-13;75!UBERON:0003528;3.46e-12;34!UBERON:0002020;3.46e-12;34!UBERON:0000988;1.40e-11;3!UBERON:0002619;1.80e-11;22!UBERON:0002791;1.03e-10;32!UBERON:0001869;3.19e-10;32!UBERON:0001950;4.73e-10;20!UBERON:0000956;5.83e-10;25!UBERON:0000203;5.83e-10;25!UBERON:0001893;7.56e-09;34!UBERON:0003296;8.47e-09;4!UBERON:0010133;8.47e-09;4!UBERON:0001897;2.04e-08;2!UBERON:0010225;2.04e-08;2!UBERON:0001905;3.31e-08;2!UBERON:0002148;3.31e-08;2!UBERON:0002757;3.31e-08;2!UBERON:0010134;3.31e-08;2!UBERON:0006331;3.31e-08;2!UBERON:0009662;3.31e-08;2!UBERON:0005408;3.31e-08;2!UBERON:0001899;3.31e-08;2!UBERON:0001876;5.45e-08;2!UBERON:0000349;5.38e-07;5!UBERON:0002037;7.65e-07;6 | |ontology_enrichment_development_v019=UBERON:0006215;2.45e-13;3!UBERON:0006601;7.56e-09;82 | ||
|ontology_enrichment_disease=DOID:171!2.68e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:3119;8.51e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,8.62e-07,14 | |||
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|ontology_enrichment_uberon_v019=UBERON:0004732;1.69e-22;13!UBERON:0000073;2.22e-22;53!UBERON:0002616;2.22e-22;53!UBERON:0004733;1.77e-19;12!UBERON:0002028;1.77e-19;12!UBERON:0001894;2.84e-18;7!UBERON:0002780;8.14e-16;41!UBERON:0001890;8.14e-16;41!UBERON:0001016;1.57e-15;83!UBERON:0002298;2.96e-15;6!UBERON:0002680;3.36e-15;9!UBERON:0001895;3.36e-15;9!UBERON:0002784;6.27e-15;4!UBERON:0000955;1.85e-14;68!UBERON:0001017;1.13e-13;75!UBERON:0003528;3.46e-12;34!UBERON:0002020;3.46e-12;34!UBERON:0000988;1.40e-11;3!UBERON:0002619;1.80e-11;22!UBERON:0002791;1.03e-10;32!UBERON:0001869;3.19e-10;32!UBERON:0001950;4.73e-10;20!UBERON:0000956;5.83e-10;25!UBERON:0000203;5.83e-10;25!UBERON:0001893;7.56e-09;34!UBERON:0003296;8.47e-09;4!UBERON:0010133;8.47e-09;4!UBERON:0001897;2.04e-08;2!UBERON:0010225;2.04e-08;2!UBERON:0001905;3.31e-08;2!UBERON:0002148;3.31e-08;2!UBERON:0002757;3.31e-08;2!UBERON:0010134;3.31e-08;2!UBERON:0006331;3.31e-08;2!UBERON:0009662;3.31e-08;2!UBERON:0005408;3.31e-08;2!UBERON:0001899;3.31e-08;2!UBERON:0001876;5.45e-08;2!UBERON:0000349;5.38e-07;5!UBERON:0002037;7.65e-07;6 | |||
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| ||
|short_description=p1@MYT1 | |short_description=p1@MYT1 | ||
}} | }} |
Latest revision as of 15:35, 17 September 2015
Short description: | p1@MYT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MYT1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -7bp_to_ENST00000328439, ENST00000536311, NM_004535, uc002yii.2_5end |
EntrezGene: | MYT1 |
HGNC: | 7622 |
UniProt: | Q01538F5H7M8Q7Z5W2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.05e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 8.62e-07 | 14 |