FFCP PHASE1:Hg19::chr2:55237438..55237453,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57142 | |EntrezGene=57142 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14085 | |HGNC=14085 | ||
|TSSclassifier=strong | |||
|UniProt=Q7L7Q5,Q9NQC3 | |UniProt=Q7L7Q5,Q9NQC3 | ||
|association_with_transcript=16bp_to_NM_007008,uc002ryc.2_5end | |association_with_transcript=16bp_to_NM_007008,uc002ryc.2_5end | ||
|cluster_id=chr2:55237438..55237453,- | |||
|description=CAGE_peak_9_at_RTN4_5end | |description=CAGE_peak_9_at_RTN4_5end | ||
|id=chr2:55237438..55237453,- | |id=chr2:55237438..55237453,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.10e-13;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.34e-50!115;UBERON:0001049!1.59e-30!57;UBERON:0005068!1.59e-30!57;UBERON:0006241!1.59e-30!57;UBERON:0007135!1.59e-30!57;UBERON:0003080!3.36e-25!42;UBERON:0002616!8.78e-25!59;UBERON:0002780!1.44e-24!41;UBERON:0001890!1.44e-24!41;UBERON:0006240!1.44e-24!41;UBERON:0000955!3.22e-24!69;UBERON:0006238!3.22e-24!69;UBERON:0001017!5.16e-22!82;UBERON:0005743!4.94e-21!86;UBERON:0002020!1.49e-19!34;UBERON:0003528!1.49e-19!34;UBERON:0001893!1.53e-19!34;UBERON:0000073!7.71e-19!94;UBERON:0001016!7.71e-19!94;UBERON:0001869!8.65e-19!32;UBERON:0002791!9.58e-19!33;UBERON:0003075!1.01e-18!86;UBERON:0007284!1.01e-18!86;UBERON:0002346!1.85e-18!90;UBERON:0002619!1.21e-16!22;UBERON:0000153!5.90e-16!129;UBERON:0007811!5.90e-16!129;UBERON:0001950!4.23e-15!20;UBERON:0003056!1.16e-14!61;UBERON:0000033!8.62e-14!123;UBERON:0000956!1.37e-13!25;UBERON:0000203!1.37e-13!25;UBERON:0000924!1.79e-10!173;UBERON:0006601!1.79e-10!173;UBERON:0004121!2.10e-10!169;UBERON:0002420!7.14e-08!9;UBERON:0007245!7.14e-08!9;UBERON:0010009!7.14e-08!9;UBERON:0010011!7.14e-08!9;UBERON:0000454!7.14e-08!9;UBERON:0002308!1.48e-07!9;UBERON:0000125!1.48e-07!9;UBERON:0001871!3.05e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.47e-29;32!UBERON:0001893;1.77e-28;34!UBERON:0002780;3.57e-28;41!UBERON:0001890;3.57e-28;41!UBERON:0003528;4.63e-28;34!UBERON:0002020;4.63e-28;34!UBERON:0002791;3.58e-27;32!UBERON:0002619;8.99e-27;22!UBERON:0000073;9.47e-26;53!UBERON:0002616;9.47e-26;53!UBERON:0001950;6.69e-24;20!UBERON:0000956;6.50e-23;25!UBERON:0000203;6.50e-23;25!UBERON:0000955;2.38e-19;68!UBERON:0001017;5.18e-19;75!UBERON:0007023;1.87e-15;114!UBERON:0001016;1.70e-13;83!UBERON:0002420;1.90e-11;9!UBERON:0007245;1.90e-11;9!UBERON:0010009;1.90e-11;9!UBERON:0010011;1.90e-11;9!UBERON:0000454;1.90e-11;9!UBERON:0000200;6.92e-11;6!UBERON:0000125;7.01e-11;9!UBERON:0002308;7.01e-11;9!UBERON:0004733;6.31e-10;12!UBERON:0002028;6.31e-10;12!UBERON:0002298;3.00e-09;6!UBERON:0000349;3.08e-09;5!UBERON:0004732;5.26e-09;13!UBERON:0001871;5.92e-09;6!UBERON:0001894;1.20e-08;7!UBERON:0009663;2.03e-08;7!UBERON:0002784;1.27e-07;4!UBERON:0000369;1.28e-07;4!UBERON:0002435;1.28e-07;4!UBERON:0000204;1.28e-07;4!UBERON:0011216;2.22e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.63e-60,114;UBERON:0001049,8.25e-50,56;UBERON:0005068,8.25e-50,56;UBERON:0006241,8.25e-50,56;UBERON:0007135,8.25e-50,56;UBERON:0000073,1.18e-48,53;UBERON:0002616,1.18e-48,53;UBERON:0000955,3.01e-42,68;UBERON:0006238,3.01e-42,68;UBERON:0002780,9.11e-40,41;UBERON:0001890,9.11e-40,41;UBERON:0003080,9.11e-40,41;UBERON:0006240,9.11e-40,41;UBERON:0001017,1.92e-38,81;UBERON:0001016,4.37e-33,89;UBERON:0001869,1.22e-32,32;UBERON:0003528,1.87e-32,34;UBERON:0002020,1.87e-32,34;UBERON:0001893,1.97e-32,34;UBERON:0003075,3.89e-31,82;UBERON:0007284,3.89e-31,82;UBERON:0002791,6.16e-30,32;UBERON:0002346,5.07e-29,86;UBERON:0002619,8.64e-27,22;UBERON:0010371,5.06e-25,104;UBERON:0003056,6.81e-25,61;UBERON:0001950,6.43e-24,20;UBERON:0000956,6.28e-23,25;UBERON:0000203,6.28e-23,25;UBERON:0011216,1.43e-20,223;UBERON:0004121,3.71e-18,171;UBERON:0000924,3.71e-18,171;UBERON:0006601,3.71e-18,171;UBERON:0010314,4.66e-18,132;UBERON:0002420,1.57e-11,9;UBERON:0007245,1.57e-11,9;UBERON:0010009,1.57e-11,9;UBERON:0010011,1.57e-11,9;UBERON:0000454,1.57e-11,9;UBERON:0003076,4.60e-11,15;UBERON:0003057,4.60e-11,15;UBERON:0000125,5.47e-11,9;UBERON:0002308,5.47e-11,9;UBERON:0000200,6.11e-11,6;UBERON:0000025,4.71e-10,192;UBERON:0004733,6.12e-10,12;UBERON:0002028,6.12e-10,12;UBERON:0007277,6.12e-10,12;UBERON:0004111,8.60e-10,240;UBERON:0002298,3.06e-09,6;UBERON:0000349,3.11e-09,5;UBERON:0004732,5.11e-09,13;UBERON:0001871,5.90e-09,6;UBERON:0001894,1.14e-08,7;UBERON:0006222,1.14e-08,7;UBERON:0009663,1.70e-08,7;UBERON:0002784,1.20e-07,4;UBERON:0000369,1.22e-07,4;UBERON:0002435,1.22e-07,4;UBERON:0000204,1.22e-07,4;UBERON:0010082,1.22e-07,4 | |||
|phase1_expression=0,1.2846031433459,0.563817616383885,0,2.23480547213644,0,0,0,1.04474251279935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0,0.393364276848904,0.383829398097213,0.154816123316076,0,0,0,0,0,0.293600439334847,0,0,0,0.447830948479849,0,0.257575567634187,0.145398238779565,0.377875943688809,0.242584061187816,0,0,0.309706370895104,0.863077176966451,0.256160706529101,0,0.344745680736619,0,0,0.564727018627814,0,0,0.306083892370903,0.320929027076094,1.91801137739712,0.329851300186716,0.199463657621632,0.426224750532694,0.290209238628584,0.56738522469114,0,0.75374599577023,0,0,0.605399502633369,0.368277635987565,0.316462387440884,0,0.212604299965044,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0.616804496998528,0,0.651844533267181,1.89379122293893,0,1.33692548262208,0.294605907474837,0.886135578334485,0.812411591295047,0.25618263945135,0.260118695119756,0.328875809207352,0,0.289803085735052,0.593146252648242,0.535081656179426,0,0.226618685395132,0.383220493601921,0.68725489096526,0.506039384039006,0,0,0,0,0,0,0,0.821127996921047,0.201606743224732,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,5.89405839739707,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0.30648779579902,0,0,0.179389635688862,0.213557388818567,0.211931901159562,0,0,0,0,0.337552664482532,0.0974370051611986,0.504867548488229,0.184099797284599,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337169380156203,0,0,0,0,0.134831308160164,0,0,0,0,0,0,44.3642621876408,23.587853200263,40.7645035610169,0,0.491953754172454,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0.179117045405697,0,1.15014803749563,0,0,0,0.576479813667846,0.25248486685276,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50677127429638,0,0,0,0,0,0,0,0.112085143993527,0.591092280605782,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0.0821271560138091,0,0,0.120859449591622,0,0.0920809889358963,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0.261435451024901,0,0,0,22.3598995275557,0,0.082509499920588,0,0,0,0,0,0.15350367472613,0,0,0,0,1.33548053470106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.0778328151678,0,1.68471475667626,0.443430153536676,0,1.01489521846434,1.52927441428475,0,0.238231775457789,0.411362273086194,0,0,1.58625035258854,0,0,0,0.743212700502875,0.144269212976445,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0.811367035427949,0,0,3.55567026775618,3.51619630252546,0,0,0,0.23874448473769,0,0,31.8127247285215,10.2688673979674,0,0,0,0,0.828851746593443,5.03865495708552,0,0.369254416383208,0,0,0.537063524026827,0,1.57829449019094,0,0,16.4786566836187,15.4922723930292,1.99613798001194,0.520855522170466,1.13697999995054,2.17499872630438,1.365521379426,0,0.945550727071745,0,1.74962768029953,0,18.6005691020906,9.88890796728345,18.30980835805,17.6926815889959,17.7328571372129,27.6425600414005,0,0.41827123283581,0.384751292518985,0,10.6059396018508,0.718061155278177,4.67183699264635,0,0,2.66517388009317,0,0,0,0,0,0,0,0,0,0.163232808159148,0.282706142867882,0,0.995261931078505,3.71521770914025,1.83309043480088,0,0,0,1.34802265961354,16.0515529459758,13.5873378520697,0,0,0,1.57833761139756,2.41981432097328,0.30607276163049,0.758238955541855,0,0.207376382794494,0,0,0,0,0,0,0,0.195984794828755,0,4.01871336956669,1.71986032471617,0,0,0,2.32773639572207,0,8.81324889044077,0,0,24.1847240551457,0.586654148204409,0,0.213452994739353,0,0.144090417154106,0,0.171594997861965,0,0.124252535565433,0.471388069233591,0,0.104602846312333,0,0,10.2071449080664,1.77976992559591,0,0,0,0,0.687481272035051,0,1.39775300349294,0.429226048136571,0,0,0,0,0,0,0,0,1.1007533168552,17.4950531758047,6.26535668113248,0,0,0,0,0.77380195455795,18.1641174407494,0.335434687599266,26.0058834087354,5.08809504909482,0,0.179287339332845,0,0,0,0,0,0.864221491201268,0,0,0,0.170388021785422,0,16.4138501719452,5.30027555648885,7.88626033805458,2.77688463659649,0.342173675768659,0,1.17466153824464,0.628817220398664,0.828478110694391,0,0,0.730755590285376,1.27668251554036,16.3205341010842,16.0441532174528,12.2538230705385,16.0657589047804,0,26.5820453990096,30.0184611658829,9.76489259510699,4.0138643698305,4.54809111301094,4.40884460883822,11.2062394298347,0,0,0.285465333544967,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0.400027764663154,0,0.336749488765919,0,0,0.214441591374926,0,0,0,0,0.179088841081487,0.926404341482917,0,0,0,0.168942440653073,1.53744911152768,1.0362910251936,0,11.8902255090488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3145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| ||
|short_description=p9@RTN4 | |short_description=p9@RTN4 | ||
}} | }} |
Latest revision as of 16:39, 17 September 2015
Short description: | p9@RTN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_RTN4_5end |
Coexpression cluster: | NA |
Association with transcript: | 16bp_to_NM_007008, uc002ryc.2_5end |
EntrezGene: | RTN4 |
HGNC: | 14085 |
UniProt: | Q7L7Q5Q9NQC3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data