FFCP PHASE1:Hg19::chr3:24536332..24536358,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:24536332..24536358,-
|short_description=p2@THRB
|description=CAGE_peak_2_at_THRB_5end
|association_with_transcript=-19bp_to_ENST00000356447,NM_000461,NM_00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7068 | |EntrezGene=7068 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11799 | |HGNC=11799 | ||
|TSSclassifier=strong | |||
|UniProt=P10828,F1D8N7 | |UniProt=P10828,F1D8N7 | ||
|association_with_transcript=-19bp_to_ENST00000356447,NM_000461,NM_001128176,NM_001128177,NM_001252634,uc003ccy.3,uc003ccz.3,uc010hfe.2_5end | |||
|cluster_id=chr3:24536332..24536358,- | |||
|coexpression_cluster_id=C4322 | |||
|description=CAGE_peak_2_at_THRB_5end | |||
|id=chr3:24536332..24536358,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.30e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.27e-38!115;UBERON:0001049!3.93e-23!57;UBERON:0005068!3.93e-23!57;UBERON:0006241!3.93e-23!57;UBERON:0007135!3.93e-23!57;UBERON:0000062!1.16e-22!511;UBERON:0003080!5.40e-21!42;UBERON:0002780!2.50e-20!41;UBERON:0001890!2.50e-20!41;UBERON:0006240!2.50e-20!41;UBERON:0001893!1.02e-18!34;UBERON:0002616!2.10e-18!59;UBERON:0001869!3.10e-18!32;UBERON:0001017!3.40e-18!82;UBERON:0002020!4.42e-18!34;UBERON:0003528!4.42e-18!34;UBERON:0000955!4.45e-18!69;UBERON:0006238!4.45e-18!69;UBERON:0002791!5.64e-18!33;UBERON:0002619!6.77e-18!22;UBERON:0005743!1.16e-16!86;UBERON:0001950!1.45e-16!20;UBERON:0003075!3.64e-15!86;UBERON:0007284!3.64e-15!86;UBERON:0000064!1.47e-14!219;UBERON:0000475!2.14e-14!365;UBERON:0000956!3.19e-14!25;UBERON:0000203!3.19e-14!25;UBERON:0000481!4.16e-14!347;UBERON:0004121!7.15e-14!169;UBERON:0002346!2.57e-13!90;UBERON:0000073!2.82e-13!94;UBERON:0001016!2.82e-13!94;UBERON:0000467!4.05e-13!625;UBERON:0000480!6.23e-13!626;UBERON:0000468!7.67e-13!659;UBERON:0000924!1.09e-12!173;UBERON:0006601!1.09e-12!173;UBERON:0000033!1.67e-12!123;UBERON:0000153!3.11e-12!129;UBERON:0007811!3.11e-12!129;UBERON:0003056!3.72e-12!61;UBERON:0004119!1.29e-10!169;UBERON:0000925!1.29e-10!169;UBERON:0006595!1.29e-10!169;UBERON:0001007!1.86e-10!155;UBERON:0001555!1.86e-10!155;UBERON:0007026!1.86e-10!155;UBERON:0004921!3.96e-09!129;UBERON:0004185!3.96e-09!129;UBERON:0000922!1.45e-08!612;UBERON:0002050!1.70e-08!605;UBERON:0005423!1.70e-08!605;UBERON:0000923!2.50e-08!604;UBERON:0005291!2.50e-08!604;UBERON:0006598!2.50e-08!604;UBERON:0002532!2.50e-08!604;UBERON:0000477!7.44e-08!286;UBERON:0000077!4.61e-07!130;UBERON:0001871!6.15e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.63e-28;22!UBERON:0001950;7.64e-26;20!UBERON:0001869;2.22e-25;32!UBERON:0001893;5.64e-25;34!UBERON:0002791;7.58e-25;32!UBERON:0000956;1.22e-23;25!UBERON:0000203;1.22e-23;25!UBERON:0003528;1.47e-23;34!UBERON:0002020;1.47e-23;34!UBERON:0002780;3.91e-23;41!UBERON:0001890;3.91e-23;41!UBERON:0000073;6.83e-17;53!UBERON:0002616;6.83e-17;53!UBERON:0007023;3.94e-13;114!UBERON:0001017;8.16e-13;75!UBERON:0000955;2.28e-12;68!UBERON:0001016;3.69e-10;83!UBERON:0000200;4.87e-09;6!UBERON:0001871;5.18e-09;6!UBERON:0002420;7.67e-08;9!UBERON:0007245;7.67e-08;9!UBERON:0010009;7.67e-08;9!UBERON:0010011;7.67e-08;9!UBERON:0000454;7.67e-08;9!UBERON:0001872;1.34e-07;5!UBERON:0002021;1.97e-07;5!UBERON:0000349;2.92e-07;5!UBERON:0011216;8.34e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.40e-42,114;UBERON:0001049,1.30e-31,56;UBERON:0005068,1.30e-31,56;UBERON:0006241,1.30e-31,56;UBERON:0007135,1.30e-31,56;UBERON:0002780,4.32e-31,41;UBERON:0001890,4.32e-31,41;UBERON:0003080,4.32e-31,41;UBERON:0006240,4.32e-31,41;UBERON:0001893,2.66e-29,34;UBERON:0000073,3.47e-29,53;UBERON:0002616,3.47e-29,53;UBERON:0001869,1.59e-28,32;UBERON:0002619,6.75e-28,22;UBERON:0002791,1.13e-27,32;UBERON:0003528,3.02e-27,34;UBERON:0002020,3.02e-27,34;UBERON:0001950,9.54e-26,20;UBERON:0000955,1.18e-25,68;UBERON:0006238,1.18e-25,68;UBERON:0001017,8.44e-25,81;UBERON:0000956,1.42e-23,25;UBERON:0000203,1.42e-23,25;UBERON:0011216,1.72e-23,223;UBERON:0001016,1.44e-21,89;UBERON:0003075,1.34e-20,82;UBERON:0007284,1.34e-20,82;UBERON:0002346,6.93e-19,86;UBERON:0003056,1.03e-17,61;UBERON:0010371,3.96e-16,104;UBERON:0004121,5.04e-14,171;UBERON:0000924,5.04e-14,171;UBERON:0006601,5.04e-14,171;UBERON:0010314,7.23e-14,132;UBERON:0004111,1.87e-09,240;UBERON:0000200,5.18e-09,6;UBERON:0001871,5.40e-09,6;UBERON:0000025,2.22e-08,192;UBERON:0002420,7.05e-08,9;UBERON:0007245,7.05e-08,9;UBERON:0010009,7.05e-08,9;UBERON:0010011,7.05e-08,9;UBERON:0000454,7.05e-08,9;UBERON:0001872,1.36e-07,5;UBERON:0002021,2.22e-07,5;UBERON:0000349,2.84e-07,5;UBERON:0004921,8.22e-07,118;UBERON:0000160,8.92e-07,17 | |||
|phase1_expression=1.09007027562334,0.856402095563933,0.845726424575827,1.0007329835313,0.893922188854576,0.872338524100369,0,0,2.35067065379855,0,0,3.05817920982241,0.527533956456907,0,0.994192127183747,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0.293600439334847,0,0,0,0.447830948479849,0.32389366601898,0.515151135268373,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14950487990897,0,0,0.569212969109448,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.255725123687061,0,0,0.144846518960824,0,0,0.283604451492204,0,0,1.70272798147026,0,0.741568885568859,0.97364218096405,0.348259474598534,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,1.55605517699883,0.269421344139376,0,0.454072282934794,0,0,0.312160076830321,0.570471821544449,0.896692083310806,1.17434498643765,0.809364721840658,0.842704840213491,0.408308342509787,0.122834317311768,1.34323515528495,0,0.741800787835671,0.910161361938026,0,0.505008341862199,0.500474079487857,0.554128230968366,0,0,0.751190294532984,0,0.179389635688862,0.640672166455702,1.48352330811693,0,0.721367704669072,0.772921620136887,0.18611685633159,0.337552664482532,0.68205903612839,2.27190396819703,2.57739716198438,0.80823028409406,0.355009592516614,0.201504196455281,0,0,0,0.573609190778008,0,0.530119073285941,0.116193942869518,0,0,0.36497735907583,1.56449532329816,0.643240938192885,0,0.464367928031979,0.721879481669586,0.591534000199219,0.674338760312407,1.44606617930089,1.10293972732394,1.08939722046203,1.42362371466658,0.808987848960987,0.392442930250692,0,0,0,0,0,2.53510069643662,4.91413608338813,1.77236972004421,0,2.21379189377604,0.171567810298526,0.109750285408626,0,0.201057944823262,0.0925884451585296,0,0,0,0.34779121492523,0,0,0,0,0,0,0.492434012174795,0.936017060556951,0.594524649154913,0,0,0.141775097242386,1.07470227243418,0.871901815541886,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0.43596006883328,0,0,0,1.690605505112,0.531876233169741,1.04007436911366,0,0,0,0.57191197463259,0,0,0,0.355391948742546,0,0,0,0.099972991182057,1.2162378064119,0,2.10833939483032,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0.773288812777695,0.670065061337395,0,0,0,0,0.24538298343828,0,0,0.415941723061614,0,0.315404830067869,0.702848489956279,0.300946099727719,0,1.03473071292505,0,0,1.12948698808508,0,0,0,0,0,0.303127571446259,3.32870879020994,1.20956117331872,0,0.920771839728375,1.12264037773229,0.256278298511402,1.53512174720011,0.160853921143607,0,0.462629081407967,0.177561725313127,0.246381468041427,0,0.116210378459959,1.32945394550784,0.601519410909855,1.10497186723076,0,0,0.131124414959424,0,0.385076685522074,0,0,0.105551628892876,0,0,0,0,0.541892875087706,0.501689773854853,0.509752546090077,0.831076008928724,0.447749509444357,0.657779629937804,0.522870902049801,0,0,0,2.88514832613622,0.0915694648183434,0.165018999841176,0.574265537996172,0,0,0,1.69453478826109,1.22802939780904,0.413509717453592,2.47066563197029,2.75531718437034,0.681813019328807,0.267096106940212,0.330569830721956,0.576570202095319,0.255225424989168,0.30347334256665,0,0,0,0,0,0,0,0.286249773483982,0,0,0,0.255897791311334,0.42793898803392,0,0,1.79872457583315,1.37268514868027,1.41374882814824,0,0,0,0.975267478179181,0,0,0,0,0,0,0,0,1.15755106853338,1.31178950409327,0,0.6196469961995,0,0,0.0982490410131212,0,0,0.211107635297664,0.329294892959902,0.379473173765715,0.699869440489966,0,0.670302275535787,0,2.54188262097304,0,0,0.443430153536676,0,0,0,0,0,0,0,0.540031437238115,0,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.811367035427949,5.32915148796512,0,0.561421621224659,1.75809815126273,0,0,0,1.43246690842614,3.26661148915902,1.84296421259539,7.95318118213038,6.75213198770461,0.667852230137435,0,0,6.17668763578316,0.552567831062295,0,1.63629892003448,0,0,0.898683511473268,1.07412704805365,0,1.57829449019094,0,1.11136990144637,4.84666373047609,7.2359116566244,3.99227596002388,0.7812832832557,3.14855999986305,4.34999745260876,1.0241410345695,0.254253650292766,0.472775363535873,0,0,0,2.65722415744152,3.97968247463846,1.52581736317083,1.10579259931225,0.295547618953547,6.80094731177315,0,0.278847488557207,1.76985594558733,0.569710279235006,2.07507513949254,0.718061155278177,1.52106320690811,2.23300811812344,0.732780747214898,3.19820865611181,0,0,0,0.902382642468723,2.15668787749514,1.34257269580674,0.75901493089674,1.27149263184303,0.843992258112108,1.14262965711403,0.565412285735763,0,0.995261931078505,3.09601475761687,4.888241159469,0,0,0,1.07841812769083,0,2.34264445725339,0,2.15231080825299,0,1.18375320854817,1.20990716048664,2.75465485467441,1.13735843331278,0,0.72581733978073,0.664653872707185,0,0.313932918407225,0,0,0,0.694238953340524,0.881931576729399,0.34823682632161,1.3978133459362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| ||
|short_description=p2@THRB | |||
}} | }} |
Latest revision as of 20:18, 17 September 2015
Short description: | p2@THRB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_THRB_5end |
Coexpression cluster: | C4322_occipital_frontal_insula_medial_olfactory_aorta_serous |
Association with transcript: | -19bp_to_ENST00000356447, NM_000461, NM_001128176, NM_001128177, NM_001252634, uc003ccy.3, uc003ccz.3, uc010hfe.2_5end |
EntrezGene: | THRB |
HGNC: | 11799 |
UniProt: | P10828F1D8N7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data