FFCP PHASE1:Hg19::chr4:42659102..42659161,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10396 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13531 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y2Q0,Q4G1C1,Q32M35 | |||
|association_with_transcript=0bp_to_ENST00000264449,ENST00000381668,ENST00000510289,NM_001105529,NM_006095,uc003gwr.2,uc003gws.2,uc011byz.1_5end | |||
|cluster_id=chr4:42659102..42659161,- | |||
|coexpression_cluster_id=C2970 | |||
|description=CAGE_peak_1_at_ATP8A1_5end | |||
|id=chr4:42659102..42659161,- | |||
|ontology_enrichment_celltype=CL:0000738!2.90e-23!140;CL:0000037!1.69e-22!172;CL:0000566!1.69e-22!172;CL:0000988!2.13e-21!182;CL:0002032!3.45e-20!165;CL:0000837!3.45e-20!165;CL:0002087!1.48e-19!119;CL:0000542!1.02e-18!53;CL:0000051!1.02e-18!53;CL:0000838!1.81e-18!52;CL:0002031!7.48e-18!124;CL:0000945!2.09e-09!24;CL:0000826!2.09e-09!24;CL:0000084!3.21e-09!25;CL:0000827!3.21e-09!25;CL:0000791!1.01e-08!18;CL:0000789!1.01e-08!18;CL:0002420!1.01e-08!18;CL:0002419!1.01e-08!18;CL:0000790!1.01e-08!18;CL:0000236!3.32e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000542;4.02e-12;53!CL:0000945;6.65e-10;24!CL:0000084;1.09e-09;25!CL:0000791;3.60e-09;18!CL:0000789;3.60e-09;18!CL:0002419;3.60e-09;18!CL:0000236;3.06e-07;13!CL:0002087;4.69e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,9.19e-26,136;CL:0000037,1.28e-24,168;CL:0000988,1.30e-23,177;CL:0002032,4.00e-22,161;CL:0000837,4.00e-22,161;CL:0002087,4.57e-22,115;CL:0002031,6.81e-20,120;CL:0000542,8.72e-20,53;CL:0000051,8.72e-20,53;CL:0000838,1.61e-19,52;CL:0000945,6.81e-10,24;CL:0000826,6.81e-10,24;CL:0000084,1.07e-09,25;CL:0000827,1.07e-09,25;CL:0000791,3.60e-09,18;CL:0000789,3.60e-09,18;CL:0002420,3.60e-09,18;CL:0002419,3.60e-09,18;CL:0000790,3.60e-09,18;CL:0000236,1.48e-07,14;CL:0000766,2.95e-07,72;CL:0000763,8.71e-07,108;CL:0000049,8.71e-07,108 | |||
|ontology_enrichment_development_v019=CL:0000051;4.02e-12;53!CL:0000790;3.60e-09;18!UBERON:0006601;2.70e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.53e-42!115;UBERON:0001049!2.03e-28!57;UBERON:0005068!2.03e-28!57;UBERON:0006241!2.03e-28!57;UBERON:0007135!2.03e-28!57;UBERON:0005743!1.39e-23!86;UBERON:0001017!2.00e-23!82;UBERON:0003080!2.17e-23!42;UBERON:0002780!2.50e-23!41;UBERON:0001890!2.50e-23!41;UBERON:0006240!2.50e-23!41;UBERON:0000073!7.66e-23!94;UBERON:0001016!7.66e-23!94;UBERON:0002616!1.17e-21!59;UBERON:0000955!1.46e-20!69;UBERON:0006238!1.46e-20!69;UBERON:0003075!5.25e-20!86;UBERON:0007284!5.25e-20!86;UBERON:0001893!1.50e-19!34;UBERON:0002020!2.04e-19!34;UBERON:0003528!2.04e-19!34;UBERON:0002791!6.76e-19!33;UBERON:0001869!3.13e-18!32;UBERON:0002346!7.95e-18!90;UBERON:0003056!1.59e-15!61;UBERON:0002619!1.06e-14!22;UBERON:0000956!8.02e-14!25;UBERON:0000203!8.02e-14!25;UBERON:0001950!1.64e-13!20;UBERON:0000153!2.53e-09!129;UBERON:0007811!2.53e-09!129;UBERON:0002390!5.13e-08!102;UBERON:0003061!5.13e-08!102;UBERON:0002193!7.07e-08!112;UBERON:0000033!9.18e-08!123;UBERON:0002308!3.96e-07!9;UBERON:0000125!3.96e-07!9;UBERON:0002420!5.67e-07!9;UBERON:0007245!5.67e-07!9;UBERON:0010009!5.67e-07!9;UBERON:0010011!5.67e-07!9;UBERON:0000454!5.67e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;7.38e-18;41!UBERON:0001890;7.38e-18;41!UBERON:0001893;1.24e-17;34!UBERON:0003528;1.68e-17;34!UBERON:0002020;1.68e-17;34!UBERON:0002791;2.11e-17;32!UBERON:0001869;2.11e-17;32!UBERON:0000073;8.27e-16;53!UBERON:0002616;8.27e-16;53!UBERON:0002619;1.57e-15;22!UBERON:0000956;1.48e-14;25!UBERON:0000203;1.48e-14;25!UBERON:0001950;2.90e-14;20!UBERON:0007023;1.77e-12;114!UBERON:0000955;3.22e-10;68!UBERON:0001017;1.09e-09;75!UBERON:0001016;3.57e-09;83!UBERON:0000125;1.73e-07;9!UBERON:0002308;1.73e-07;9!UBERON:0002420;2.55e-07;9!UBERON:0007245;2.55e-07;9!UBERON:0010009;2.55e-07;9!UBERON:0010011;2.55e-07;9!UBERON:0000454;2.55e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.87e-44,114;UBERON:0001049,1.43e-29,56;UBERON:0005068,1.43e-29,56;UBERON:0006241,1.43e-29,56;UBERON:0007135,1.43e-29,56;UBERON:0000073,1.59e-27,53;UBERON:0002616,1.59e-27,53;UBERON:0002780,1.10e-24,41;UBERON:0001890,1.10e-24,41;UBERON:0003080,1.10e-24,41;UBERON:0006240,1.10e-24,41;UBERON:0001017,4.50e-24,81;UBERON:0001016,4.31e-23,89;UBERON:0003075,2.24e-21,82;UBERON:0007284,2.24e-21,82;UBERON:0000955,4.92e-21,68;UBERON:0006238,4.92e-21,68;UBERON:0001893,1.14e-20,34;UBERON:0003528,1.58e-20,34;UBERON:0002020,1.58e-20,34;UBERON:0001869,2.88e-19,32;UBERON:0002791,3.05e-19,32;UBERON:0002346,3.95e-19,86;UBERON:0003056,4.61e-17,61;UBERON:0002619,1.62e-15,22;UBERON:0000956,1.39e-14,25;UBERON:0000203,1.39e-14,25;UBERON:0001950,2.97e-14,20;UBERON:0010371,5.57e-13,104;UBERON:0010314,1.90e-09,132;UBERON:0002193,5.97e-09,108;UBERON:0002390,6.01e-09,98;UBERON:0003061,6.01e-09,98;UBERON:0011216,5.41e-08,223;UBERON:0000125,1.78e-07,9;UBERON:0002308,1.78e-07,9;UBERON:0002420,2.60e-07,9;UBERON:0007245,2.60e-07,9;UBERON:0010009,2.60e-07,9;UBERON:0010011,2.60e-07,9;UBERON:0000454,2.60e-07,9 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0,0,0,0,0,0,0.261185628199839,0,0.697801167972428,0,0.263766978228454,1.36142988256051,0.662794751455832,0,0.602694528023977,0,0,0.861847406537515,1.42800483870977,1.25381888591235,5.15224776835902,4.79060487755095,2.76193807108566,31.32949635666,27.9142004129816,30.3823615870802,9.8341069212226,29.1710342553882,13.4690027284986,0,0,0,67.3189973042821,57.2942006924309,27.5984412974756,17.7278530730201,23.2631559065364,23.2201631665961,51.7244745494225,54.7380295572075,91.181750942502,6.10672602874172,7.17964293008738,6.30718559088322,2.55671940596253,4.11167888021826,2.47765096716083,5.17846306179871,6.40401766322752,4.02019790810595,3.10271112662957,12.9096936716765,6.77132432971709,2.07066573496865,2.18324920046277,3.59557575112135,4.59125838556354,6.73950956859797,5.75403413219137,6.26717470354761,9.97318288108159,5.96714650745772,1.7412554317715,4.53908179752912,2.4912889959823,2.76373531782418,5.21482918420201,6.08128765174327,3.02699751316684,9.20694089968912,7.27863491114034,7.39393502091796,6.37812899895131,6.70907665626803,10.5588913277705,9.91167492753942,18.1619912967701,6.55529310604872,7.16100037916724,10.0465284570549,28.1593991138116,46.4217819572812,48.9230089624955,45.6601338146163,41.2407866647093,49.4287098360856,42.967916731016,56.2891715175865,73.4284730151188,60.4854305052067,54.6650716219077,26.4342657158052,20.7388168303168,22.1242631211065,35.40775862049,33.7989255964282,30.8402248499264,20.5639389330534,93.865612790474,37.8758244587787,40.9136129656614,21.836449549494,47.7261570109236,22.5964572475294,25.1847593301464,8.45402710189456,15.2169436645058,20.0614243616485,28.1877018141565,44.6296752031981,78.591878475892,34.512766823573,34.4967228556423,20.8489190563522,64.3810429251228,15.1196076012357,23.2778116657943,42.0506346907808,49.4823424930878,40.8694379112801,30.5667491727879,35.5802779009283,58.7174414796025,40.7256873515709,44.3409118337365,74.9977084796005,67.6623695332273,81.391314982133,7.31420598941885,0.670700859703636,0.383587685530591,0.361439152384566,0,1.01392563272577,0,0,4.63220604103932,3.54767035940102,5.70926107005319,23.248785900844,0,0,6.16640047943898,4.52737316978095,4.91944453919801,40.5434061319081,45.7595928624102,44.5749001595478,6.16163462836786,2.58070378531837,4.16568601929113,1.13061588384802,0,3.30141650328081,0.208994966536811,8.78616981175718,7.1153252537342,5.69025041699939,0,1.52054421143703,2.68468263302986,0,3.24056779152704,9.37647146982838,9.20570427767296,3.49095589498299,0,0.949265659568129,0.732806975721629,36.8985168820977,50.4114343392823,0,0,0.12663051166458,3.44263870114369,7.74458876021797,3.90135220418193,1.12135520028461,2.1349799145941,0.24666754841716,2.17847724779836,1.0776853765575,0.163461903113459,0.302714855289863,0,0.234321431833797,0.312160076830321,0.570471821544449,0.298897361103602,0.587172493218824,1.94247533241758,1.26405726032024,1.22492502752936,2.08818339430006,0.826606249406124,0,0,0,0,2.35670559535693,5.25497783462249,1.10825646193673,0.438977620880838,0,0,1.70148274740032,0.538168907066586,0,0,0.900273288253207,0.103052529238439,0.257640540045629,0.18611685633159,0.506328996723799,0.194874010322397,0,0.0920498986422993,0.161646056818812,0,0,0.339121184620975,0.193260853163297,0.272746120590835,0.286804595389004,5.12289565744301,5.83130980614535,3.95059405756363,6.63430752098371,2.01856680700503,4.74470566798579,0,0,0,0,0,0.591534000199219,0.842923450390509,0.482022059766964,0.441175890929576,0.435758888184812,0.474541238222193,0.943819157121151,0.588664395376038,0,19.1920418202409,0,0,0,1.26755034821831,0.982827216677626,6.49868897349544,11.4780405847809,5.16551441881077,1.3725424823882,0,0,0,0.370353780634118,0.325808305310325,0,1.44331342025273,2.08674728955138,2.7003999674239,1.44366447761074,2.77791307545966,3.99533719692656,0.790204397959275,2.57545848628462,9.1100292252337,2.34004265139238,4.60756603095058,0,0,0,0,0,0.383382679165211,11.3312544716067,10.4777636475739,3.7319060797339,11.241356366523,4.29224273649692,1.0159663086747,1.90994212779139,3.51652341630141,0,0.925447434329912,0,0.285826432630578,0,0,0,0,3.57656445851882,0,0.26593811658487,0,0,1.41849132023278,0,0,0,0,0.325736184293735,0,0,0.904318131178758,0.871533458600294,2.19940580600526,21.8922805154143,22.6015691144457,8.43335757932127,0.479249710983165,1.14861935834114,0,0.144781306667579,0.410952645100767,0.179060963239896,16.2523458790615,37.2388136781642,39.0285910495726,45.9468069881499,2.03275699377971,14.3153839243384,7.73288812777695,17.756724125441,8.93114252314428,23.2192177423627,44.8742188806037,66.3064821497657,0.858840442033979,0,0.542530047399471,0,0.356857977594324,0.157702415033935,0.35142424497814,0.300946099727719,0,1.03473071292505,0,0,0.347534457872331,0,0,50.2446303478616,30.8471307170622,40.6631995231123,0,0,0,0,0.460385919864187,0.280660094433074,0,1.53512174720011,0,0,0.308419387605311,0,0.492762936082855,0,0,4.95523743325651,0,0.828728900423067,0.45925779265842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| |||
|short_description=p1@ATP8A1 | |||
}} |
Latest revision as of 20:27, 17 September 2015
Short description: | p1@ATP8A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ATP8A1_5end |
Coexpression cluster: | C2970_optic_corpus_spinal_thalamus_thyroid_diencephalon_globus |
Association with transcript: | 0bp_to_ENST00000264449, ENST00000381668, ENST00000510289, NM_001105529, NM_006095, uc003gwr.2, uc003gws.2, uc011byz.1_5end |
EntrezGene: | ATP8A1 |
HGNC: | 13531 |
UniProt: | Q9Y2Q0Q4G1C1Q32M35 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 9.19e-26 | 136 |
hematopoietic stem cell | 1.28e-24 | 168 |
hematopoietic cell | 1.30e-23 | 177 |
hematopoietic oligopotent progenitor cell | 4.00e-22 | 161 |
hematopoietic multipotent progenitor cell | 4.00e-22 | 161 |
nongranular leukocyte | 4.57e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 6.81e-20 | 120 |
lymphocyte | 8.72e-20 | 53 |
common lymphoid progenitor | 8.72e-20 | 53 |
lymphoid lineage restricted progenitor cell | 1.61e-19 | 52 |
lymphocyte of B lineage | 6.81e-10 | 24 |
pro-B cell | 6.81e-10 | 24 |
T cell | 1.07e-09 | 25 |
pro-T cell | 1.07e-09 | 25 |
mature alpha-beta T cell | 3.60e-09 | 18 |
alpha-beta T cell | 3.60e-09 | 18 |
immature T cell | 3.60e-09 | 18 |
mature T cell | 3.60e-09 | 18 |
immature alpha-beta T cell | 3.60e-09 | 18 |
B cell | 1.48e-07 | 14 |
myeloid leukocyte | 2.95e-07 | 72 |
myeloid cell | 8.71e-07 | 108 |
common myeloid progenitor | 8.71e-07 | 108 |