FFCP PHASE1:Hg19::chr15:50405514..50405546,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79895 | |EntrezGene=79895 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13536 | |HGNC=13536 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-1bp_to_ENST00000559726,uc010ber.2_5end | |association_with_transcript=-1bp_to_ENST00000559726,uc010ber.2_5end | ||
|cluster_id=chr15:50405514..50405546,- | |||
|coexpression_cluster_id=C67 | |coexpression_cluster_id=C67 | ||
|description=CAGE_peak_3_at_ATP8B4_5end | |description=CAGE_peak_3_at_ATP8B4_5end | ||
|id=chr15:50405514..50405546,- | |id=chr15:50405514..50405546,- | ||
|ontology_enrichment_celltype=CL:0002009!5.02e-45!65;CL:0000557!6.10e-45!71;CL:0000763!2.33e-43!112;CL:0000049!2.33e-43!112;CL:0002194!2.39e-43!63;CL:0000576!2.39e-43!63;CL:0000040!2.39e-43!63;CL:0000559!2.39e-43!63;CL:0000839!8.19e-43!70;CL:0000766!3.00e-41!76;CL:0002057!2.83e-36!42;CL:0000860!1.18e-32!45;CL:0000037!4.58e-30!172;CL:0000566!4.58e-30!172;CL:0002032!9.58e-29!165;CL:0000837!9.58e-29!165;CL:0000988!1.58e-28!182;CL:0002031!3.96e-25!124;CL:0002087!1.83e-24!119;CL:0000738!3.51e-24!140;CL:0002393!2.61e-08!9;CL:0002397!2.61e-08!9 | |ontology_enrichment_celltype=CL:0002009!5.02e-45!65;CL:0000557!6.10e-45!71;CL:0000763!2.33e-43!112;CL:0000049!2.33e-43!112;CL:0002194!2.39e-43!63;CL:0000576!2.39e-43!63;CL:0000040!2.39e-43!63;CL:0000559!2.39e-43!63;CL:0000839!8.19e-43!70;CL:0000766!3.00e-41!76;CL:0002057!2.83e-36!42;CL:0000860!1.18e-32!45;CL:0000037!4.58e-30!172;CL:0000566!4.58e-30!172;CL:0002032!9.58e-29!165;CL:0000837!9.58e-29!165;CL:0000988!1.58e-28!182;CL:0002031!3.96e-25!124;CL:0002087!1.83e-24!119;CL:0000738!3.51e-24!140;CL:0002393!2.61e-08!9;CL:0002397!2.61e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.94e-36;33!CL:0002057;3.94e-36;33!CL:0000576;4.09e-35;48!CL:0000473;1.15e-34;39!CL:0000234;1.15e-34;39!CL:0000766;7.29e-23;69!CL:0000763;9.12e-16;100!CL:0002393;2.82e-09;6!CL:0002397;2.82e-09;6!CL:0002087;3.67e-08;104!CL:0000738;1.37e-07;136!CL:0000235;2.41e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,3.92e-63,61;CL:0002194,8.22e-61,59;CL:0000576,8.22e-61,59;CL:0000040,8.22e-61,59;CL:0000559,8.22e-61,59;CL:0000557,2.24e-58,67;CL:0000766,2.11e-52,72;CL:0000839,2.32e-52,66;CL:0000473,9.00e-52,48;CL:0000234,9.00e-52,48;CL:0000763,1.05e-47,108;CL:0000049,1.05e-47,108;CL:0000860,1.14e-45,42;CL:0002057,1.14e-45,42;CL:0000037,1.60e-28,168;CL:0002087,4.70e-28,115;CL:0002032,1.50e-26,161;CL:0000837,1.50e-26,161;CL:0000738,5.53e-26,136;CL:0000988,7.19e-26,177;CL:0002031,5.62e-25,120;CL:0002393,1.17e-07,9;CL:0002397,1.17e-07,9;CL:0000235,2.44e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;1.46e-32;42!CL:0000049;2.81e-14;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.57e-51!102;UBERON:0003061!9.57e-51!102;UBERON:0007023!3.16e-50!115;UBERON:0002193!4.79e-46!112;UBERON:0002371!1.45e-39!80;UBERON:0001474!5.22e-35!86;UBERON:0002405!6.65e-31!115;UBERON:0004765!3.16e-27!101;UBERON:0001434!3.16e-27!101;UBERON:0001049!4.52e-16!57;UBERON:0005068!4.52e-16!57;UBERON:0006241!4.52e-16!57;UBERON:0007135!4.52e-16!57;UBERON:0003081!1.93e-14!216;UBERON:0002616!6.59e-12!59;UBERON:0003080!1.02e-11!42;UBERON:0002780!2.45e-11!41;UBERON:0001890!2.45e-11!41;UBERON:0006240!2.45e-11!41;UBERON:0001017!2.02e-10!82;UBERON:0002204!4.43e-10!167;UBERON:0003075!4.77e-10!86;UBERON:0007284!4.77e-10!86;UBERON:0005743!5.14e-10!86;UBERON:0000955!9.13e-10!69;UBERON:0006238!9.13e-10!69;UBERON:0000178!1.83e-09!15;UBERON:0000179!1.83e-09!15;UBERON:0000463!1.83e-09!15;UBERON:0002346!5.04e-09!90;UBERON:0000062!7.81e-09!511;UBERON:0001893!1.15e-08!34;UBERON:0002020!1.34e-08!34;UBERON:0003528!1.34e-08!34;UBERON:0000073!1.96e-08!94;UBERON:0001016!1.96e-08!94;UBERON:0002791!3.68e-08!33;UBERON:0000479!4.47e-08!787;UBERON:0001869!2.39e-07!32;UBERON:0002298!2.51e-07!8 | |ontology_enrichment_uberon=UBERON:0002390!9.57e-51!102;UBERON:0003061!9.57e-51!102;UBERON:0007023!3.16e-50!115;UBERON:0002193!4.79e-46!112;UBERON:0002371!1.45e-39!80;UBERON:0001474!5.22e-35!86;UBERON:0002405!6.65e-31!115;UBERON:0004765!3.16e-27!101;UBERON:0001434!3.16e-27!101;UBERON:0001049!4.52e-16!57;UBERON:0005068!4.52e-16!57;UBERON:0006241!4.52e-16!57;UBERON:0007135!4.52e-16!57;UBERON:0003081!1.93e-14!216;UBERON:0002616!6.59e-12!59;UBERON:0003080!1.02e-11!42;UBERON:0002780!2.45e-11!41;UBERON:0001890!2.45e-11!41;UBERON:0006240!2.45e-11!41;UBERON:0001017!2.02e-10!82;UBERON:0002204!4.43e-10!167;UBERON:0003075!4.77e-10!86;UBERON:0007284!4.77e-10!86;UBERON:0005743!5.14e-10!86;UBERON:0000955!9.13e-10!69;UBERON:0006238!9.13e-10!69;UBERON:0000178!1.83e-09!15;UBERON:0000179!1.83e-09!15;UBERON:0000463!1.83e-09!15;UBERON:0002346!5.04e-09!90;UBERON:0000062!7.81e-09!511;UBERON:0001893!1.15e-08!34;UBERON:0002020!1.34e-08!34;UBERON:0003528!1.34e-08!34;UBERON:0000073!1.96e-08!94;UBERON:0001016!1.96e-08!94;UBERON:0002791!3.68e-08!33;UBERON:0000479!4.47e-08!787;UBERON:0001869!2.39e-07!32;UBERON:0002298!2.51e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000073;2.42e-08;53!UBERON:0002616;2.42e-08;53!UBERON:0002780;3.37e-08;41!UBERON:0001890;3.37e-08;41!UBERON:0007023;9.53e-08;114!UBERON:0002298;1.06e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.31e-55,98;UBERON:0003061,4.31e-55,98;UBERON:0002193,6.00e-51,108;UBERON:0002371,6.03e-51,76;UBERON:0002405,1.55e-46,93;UBERON:0001474,9.48e-46,82;UBERON:0004765,6.53e-40,90;UBERON:0001434,2.55e-35,100;UBERON:0007023,1.84e-28,114;UBERON:0003081,4.67e-20,203;UBERON:0002204,2.46e-14,167;UBERON:0001049,3.87e-14,56;UBERON:0005068,3.87e-14,56;UBERON:0006241,3.87e-14,56;UBERON:0007135,3.87e-14,56;UBERON:0000073,7.54e-12,53;UBERON:0002616,7.54e-12,53;UBERON:0002780,7.99e-10,41;UBERON:0001890,7.99e-10,41;UBERON:0003080,7.99e-10,41;UBERON:0006240,7.99e-10,41;UBERON:0002050,1.27e-09,564;UBERON:0000923,1.72e-09,560;UBERON:0010316,1.72e-09,560;UBERON:0005291,1.72e-09,560;UBERON:0006598,1.72e-09,560;UBERON:0010317,1.72e-09,560;UBERON:0002532,1.72e-09,560;UBERON:0000926,2.47e-09,315;UBERON:0004120,2.47e-09,315;UBERON:0006603,2.47e-09,315;UBERON:0001017,3.09e-09,81;UBERON:0003075,6.32e-09,82;UBERON:0007284,6.32e-09,82;UBERON:0000955,6.96e-09,68;UBERON:0006238,6.96e-09,68;UBERON:0005423,2.16e-08,581;UBERON:0002346,4.09e-08,86;UBERON:0001016,4.61e-08,89;UBERON:0002298,1.08e-07,6;UBERON:0000922,1.21e-07,592;UBERON:0001893,2.67e-07,34;UBERON:0003528,3.16e-07,34;UBERON:0002020,3.16e-07,34 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,3.83829398097213,2.63187409637329,0,0,0,0.232401601740905,0,1.76160263600908,3.32397245119126,3.60980005446255,4.34021741431704,58.8897697251001,37.5716652582016,54.0908692031792,3.78035420826868,3.02300754951048,2.18325655069035,2.55671940596253,4.11167888021826,4.64559556342655,4.89077066947656,4.86705342405291,4.02019790810595,3.44745680736619,2.5819387343353,6.77132432971709,4.1413314699373,4.63940455098338,3.37085226667627,5.20342617030534,3.20929027076094,1.91801137739712,2.63881040149373,2.99195486432448,2.98357325372886,2.90209238628584,2.8369261234557,1.86846674698672,3.26623264833766,2.08593167368081,4.77815458351257,4.84319602106695,5.15588690382591,3.16462387440884,5.49263744411049,6.37812899895131,5.2414661377094,6.17807471305723,7.0583139635508,3.2145117339416,0.285012743741249,2.98375015798635,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,4.21414535640123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,1.02389288923535,0,0.947109008176067,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,1.17881167947941,0,0,3.8945687238562,5.04976238167875,8.64226743372624,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.2090318704978,0,8.17471392588005,0,0,0,0,0,0,0,0.352193736052904,0,0.288239906833923,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.162378064119,13.0586843772353,10.5416969741516,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0.502548796003046,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10152039184331,3.8828556147351,1.60091336705167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0.261435451024901,0,0,0,1.95777922130672,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50630081242847,0,0,0,0,3.04468565539302,0.764637207142375,0.569647187174163,0.714695326373367,1.23408681925858,1.29694662238543,2.16012574895246,1.58625035258854,0,0,0,0,0,0,0,2.3949524571938,0.957526850661834,0.846694330895531,2.59697552219644,1.40398589056729,6.16233633389619,1.25343916618419,0,0.338583555603207,2.56940920165919,3.43059502224781,1.70338495076131,0.343505344755765,6.75929681478608,4.92087437363315,6.84081481018825,2.9308214310306,0,0,0.811367035427949,0,0,0,3.95572084034114,0,0,0,0,0,0,0.994147647766298,3.79807424308384,0,0,0,1.79323189425963,2.76283915531148,0,0,0.246169610922139,0,0,0,5.62729607249559,1.08507746200627,4.7896618469388,0,1.93866549219044,2.41197055220813,0,0,0,0.724999575434793,0,0,0,0,0,0,0,3.13550740426061,0,0.331737779793674,0.591095237907095,0.658156191461918,0,0,1.30815439456455,0,0,0,0,0,0,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23840590304675,0.611030144933625,0.296521128680622,0.123563938946503,0.313265848516366,3.70706231393724,0,2.81117334870407,0,0,0,0,0,0,6.3186579628488,0,0,0,0,0,0,0,0,0,0,0,3.4945333648406,0,0,0,0,0.872901148395775,0,0.225980740780532,0.137041924646751,0,2.34249945036751,0,0,1.49417096317547,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,6.84526894459965,15.3295905680367,0,10.2526068168933,0.837847203816763,1.14580212005842,0,0.998395002494955,1.28767814440971,0.446342914883745,0.739018197353989,0,0,0,0,0,0,0.0846733320657845,0,3.26888174667781,0,0,0,3.82455615637551,2.32140586367385,1.57948847310864,0,0.551639951094387,0.104909176269996,0,0,0,1.42939065274673,0,0,0,0,0,0,0.082092520749339,0,0,0.439656701034247,1.32506888912221,1.29282956361551,3.43804764530994,0,0,0.961086713109252,0.943225830597996,3.31391244277756,2.97699613087171,0,0,0,0,0,0.306345576763462,0,0,0,0.610131324509816,3.004582336956,2.29363678276028,3.99344585532668,3.35320575883471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62691028688288,0,0,0,0,0,0,0.39997479170986,4.48105264715392,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92687675289379,0,2.07524016774297,1.02558182120378,0,0.345786262321089,1.93770774758221,1.42769420259154,0,0,0,0,0,0,0,0.752103283492572,0,0,0,0,0,1.75597720007826,0,2.27355476151302,1.52197944465376,1.64092442705466,1.09651553371436,1.48863353516788,0,0,0,1.3451348888753,0.606965604236632,1.59363533945908,1.86274977341542,0,0,2.71878931907327,1.11813715056843,0,0,1.64835494986079,0.314231179832004,0,3.65263488203798,0,0,1.78691360441641,0,0,0,0,0,0.17071847709395,0,0.860454717640555,0,0,0.846774100381858,0,0,0,0,0,0,0,0.205325613712494,1.1598144313382,0.971421986118279,0,0,0,0,0,0,0.694567422971502,0.437119121007915,0,0.980593287015622,0,2.74831853960923,11.8818560130834,1.6906229103336,0,4.32326022707326,3.2228943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| ||
|short_description=p3@ATP8B4 | |short_description=p3@ATP8B4 | ||
}} | }} |
Latest revision as of 23:06, 17 September 2015
Short description: | p3@ATP8B4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ATP8B4_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | -1bp_to_ENST00000559726, uc010ber.2_5end |
EntrezGene: | ATP8B4 |
HGNC: | 13536 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 3.92e-63 | 61 |
monopoietic cell | 8.22e-61 | 59 |
monocyte | 8.22e-61 | 59 |
monoblast | 8.22e-61 | 59 |
promonocyte | 8.22e-61 | 59 |
granulocyte monocyte progenitor cell | 2.24e-58 | 67 |
myeloid leukocyte | 2.11e-52 | 72 |
myeloid lineage restricted progenitor cell | 2.32e-52 | 66 |
defensive cell | 9.00e-52 | 48 |
phagocyte | 9.00e-52 | 48 |
myeloid cell | 1.05e-47 | 108 |
common myeloid progenitor | 1.05e-47 | 108 |
classical monocyte | 1.14e-45 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.14e-45 | 42 |
hematopoietic stem cell | 1.60e-28 | 168 |
nongranular leukocyte | 4.70e-28 | 115 |
hematopoietic oligopotent progenitor cell | 1.50e-26 | 161 |
hematopoietic multipotent progenitor cell | 1.50e-26 | 161 |
leukocyte | 5.53e-26 | 136 |
hematopoietic cell | 7.19e-26 | 177 |
hematopoietic lineage restricted progenitor cell | 5.62e-25 | 120 |
intermediate monocyte | 1.17e-07 | 9 |
CD14-positive, CD16-positive monocyte | 1.17e-07 | 9 |
macrophage | 2.44e-07 | 6 |