FFCP PHASE1:Hg19::chr2:64681575..64681630,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:64681575..64681630,+ to FFCP PHASE1:Hg19::chr2:64681575..64681630,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=29094 | |EntrezGene=29094 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25012 | |HGNC=25012 | ||
|TSSclassifier=strong | |||
|UniProt=Q3ZCW2 | |UniProt=Q3ZCW2 | ||
|association_with_transcript=0bp_to_ENST00000238875,ENST00000462737_5end | |||
|cluster_id=chr2:64681575..64681630,+ | |||
|description=CAGE_peak_4_at_LGALSL_5end | |||
|id=chr2:64681575..64681630,+ | |||
|ontology_enrichment_celltype=CL:0000066!7.10e-12!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.35e-10,253 | |||
|ontology_enrichment_development_v019=UBERON:0003104;1.52e-07;31 | |||
|ontology_enrichment_disease=DOID:0050687!8.96e-16!143;DOID:305!2.21e-13!106 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.91e-07;22!DOID:2994;2.91e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.94e-14,143;DOID:305,1.29e-11,106;DOID:3095,6.44e-07,22;DOID:2994,6.44e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000924!4.26e-20!173;UBERON:0006601!4.26e-20!173;UBERON:0007023!5.56e-19!115;UBERON:0004121!5.72e-19!169;UBERON:0000481!2.90e-18!347;UBERON:0000073!1.17e-17!94;UBERON:0001016!1.17e-17!94;UBERON:0005743!1.18e-15!86;UBERON:0000033!6.25e-15!123;UBERON:0001017!8.69e-15!82;UBERON:0002346!1.03e-14!90;UBERON:0000922!3.91e-14!612;UBERON:0000153!4.12e-14!129;UBERON:0007811!4.12e-14!129;UBERON:0003075!1.29e-13!86;UBERON:0007284!1.29e-13!86;UBERON:0000064!6.20e-12!219;UBERON:0002050!1.16e-11!605;UBERON:0005423!1.16e-11!605;UBERON:0000923!2.15e-11!604;UBERON:0005291!2.15e-11!604;UBERON:0006598!2.15e-11!604;UBERON:0002532!2.15e-11!604;UBERON:0003056!2.24e-11!61;UBERON:0000955!2.40e-11!69;UBERON:0006238!2.40e-11!69;UBERON:0000468!4.26e-11!659;UBERON:0000475!6.90e-11!365;UBERON:0001049!9.21e-11!57;UBERON:0005068!9.21e-11!57;UBERON:0006241!9.21e-11!57;UBERON:0007135!9.21e-11!57;UBERON:0000483!1.94e-10!309;UBERON:0000119!3.09e-10!312;UBERON:0002616!3.40e-10!59;UBERON:0003080!5.53e-10!42;UBERON:0000477!6.52e-10!286;UBERON:0002780!1.31e-09!41;UBERON:0001890!1.31e-09!41;UBERON:0006240!1.31e-09!41;UBERON:0001869!2.09e-09!32;UBERON:0001893!2.68e-09!34;UBERON:0002020!5.66e-09!34;UBERON:0003528!5.66e-09!34;UBERON:0001007!6.20e-09!155;UBERON:0001555!6.20e-09!155;UBERON:0007026!6.20e-09!155;UBERON:0004119!6.71e-09!169;UBERON:0000925!6.71e-09!169;UBERON:0006595!6.71e-09!169;UBERON:0002791!8.09e-09!33;UBERON:0004111!3.77e-08!241;UBERON:0000480!5.17e-08!626;UBERON:0000467!6.60e-08!625;UBERON:0004921!8.47e-08!129;UBERON:0004185!8.47e-08!129;UBERON:0000956!1.30e-07!25;UBERON:0000203!1.30e-07!25;UBERON:0005177!2.66e-07!107;UBERON:0002619!3.47e-07!22;UBERON:0000077!8.90e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.18e-09;32!UBERON:0001893;3.91e-09;34!UBERON:0003528;4.92e-09;34!UBERON:0002020;4.92e-09;34!UBERON:0002791;5.37e-09;32!UBERON:0000956;2.19e-08;25!UBERON:0000203;2.19e-08;25!UBERON:0000922;2.53e-08;49!UBERON:0002619;4.58e-08;22!UBERON:0002780;8.30e-08;41!UBERON:0001890;8.30e-08;41!UBERON:0001950;1.85e-07;20!UBERON:0000073;7.74e-07;53!UBERON:0002616;7.74e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,1.24e-24,223;UBERON:0004121,5.60e-19,171;UBERON:0000924,5.60e-19,171;UBERON:0006601,5.60e-19,171;UBERON:0007023,1.58e-18,114;UBERON:0001016,1.70e-15,89;UBERON:0001017,3.30e-14,81;UBERON:0010371,3.67e-14,104;UBERON:0002346,5.68e-14,86;UBERON:0003075,8.41e-13,82;UBERON:0007284,8.41e-13,82;UBERON:0003056,1.02e-12,61;UBERON:0000922,1.10e-12,592;UBERON:0000955,8.32e-11,68;UBERON:0006238,8.32e-11,68;UBERON:0001869,1.01e-10,32;UBERON:0000073,1.10e-10,53;UBERON:0002616,1.10e-10,53;UBERON:0001049,1.30e-10,56;UBERON:0005068,1.30e-10,56;UBERON:0006241,1.30e-10,56;UBERON:0007135,1.30e-10,56;UBERON:0002780,1.35e-10,41;UBERON:0001890,1.35e-10,41;UBERON:0003080,1.35e-10,41;UBERON:0006240,1.35e-10,41;UBERON:0001893,1.38e-10,34;UBERON:0003528,3.23e-10,34;UBERON:0002020,3.23e-10,34;UBERON:0002791,4.97e-10,32;UBERON:0005423,7.80e-10,581;UBERON:0010314,3.28e-09,132;UBERON:0000956,9.91e-09,25;UBERON:0000203,9.91e-09,25;UBERON:0002619,2.85e-08,22;UBERON:0001007,5.17e-08,145;UBERON:0001555,5.17e-08,145;UBERON:0007026,5.17e-08,145;UBERON:0004921,7.13e-08,118;UBERON:0004119,1.05e-07,160;UBERON:0000925,1.05e-07,160;UBERON:0006595,1.05e-07,160;UBERON:0001950,1.21e-07,20;UBERON:0002050,5.19e-07,564;UBERON:0000483,8.90e-07,306 | |||
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| ||
|short_description=p4@LGALSL | |||
}} | }} |
Latest revision as of 23:40, 17 September 2015
Short description: | p4@LGALSL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LGALSL_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000238875, ENST00000462737_5end |
EntrezGene: | LGALSL |
HGNC: | 25012 |
UniProt: | Q3ZCW2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.35e-10 | 253 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.94e-14 | 143 |
carcinoma | 1.29e-11 | 106 |
germ cell and embryonal cancer | 6.44e-07 | 22 |
germ cell cancer | 6.44e-07 | 22 |