FFCP PHASE1:Hg19::chr4:57522166..57522260,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84525 | |EntrezGene=84525 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24961 | |HGNC=24961 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=446bp_to_ENST00000503639_5end | |association_with_transcript=446bp_to_ENST00000503639_5end | ||
|cluster_id=chr4:57522166..57522260,- | |||
|description=CAGE_peak_2_at_HOPX_5end | |description=CAGE_peak_2_at_HOPX_5end | ||
|id=chr4:57522166..57522260,- | |id=chr4:57522166..57522260,- | ||
|ontology_enrichment_celltype=CL:0000625!5.58e-09!11;CL:0000791!5.87e-09!18;CL:0000789!5.87e-09!18;CL:0002420!5.87e-09!18;CL:0002419!5.87e-09!18;CL:0000790!5.87e-09!18 | |ontology_enrichment_celltype=CL:0000625!5.58e-09!11;CL:0000791!5.87e-09!18;CL:0000789!5.87e-09!18;CL:0002420!5.87e-09!18;CL:0002419!5.87e-09!18;CL:0000790!5.87e-09!18 | ||
|ontology_enrichment_celltype_v019=CL:0000625;5.91e-11;11!CL:0000791;1.70e-10;18!CL:0000789;1.70e-10;18!CL:0002419;1.70e-10;18!CL:0000084;7.83e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,5.93e-11,11;CL:0000791,1.50e-10,18;CL:0000789,1.50e-10,18;CL:0002420,1.50e-10,18;CL:0002419,1.50e-10,18;CL:0000790,1.50e-10,18;CL:0000084,6.63e-08,25;CL:0000827,6.63e-08,25 | |||
|ontology_enrichment_development_v019=CL:0000790;1.70e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.51e-40!115;UBERON:0001049!2.54e-26!57;UBERON:0005068!2.54e-26!57;UBERON:0006241!2.54e-26!57;UBERON:0007135!2.54e-26!57;UBERON:0001017!5.43e-23!82;UBERON:0005743!7.16e-23!86;UBERON:0003075!7.25e-23!86;UBERON:0007284!7.25e-23!86;UBERON:0002616!8.04e-23!59;UBERON:0002020!4.93e-21!34;UBERON:0003528!4.93e-21!34;UBERON:0003080!4.97e-21!42;UBERON:0002780!6.05e-21!41;UBERON:0001890!6.05e-21!41;UBERON:0006240!6.05e-21!41;UBERON:0001893!6.45e-21!34;UBERON:0002346!7.68e-21!90;UBERON:0000955!8.58e-21!69;UBERON:0006238!8.58e-21!69;UBERON:0001869!1.71e-20!32;UBERON:0002791!3.40e-20!33;UBERON:0000073!1.64e-19!94;UBERON:0001016!1.64e-19!94;UBERON:0000153!2.06e-19!129;UBERON:0007811!2.06e-19!129;UBERON:0003056!2.30e-19!61;UBERON:0000033!8.24e-18!123;UBERON:0000956!6.38e-17!25;UBERON:0000203!6.38e-17!25;UBERON:0002619!2.53e-15!22;UBERON:0004121!7.90e-15!169;UBERON:0001950!4.23e-14!20;UBERON:0000924!7.16e-14!173;UBERON:0006601!7.16e-14!173;UBERON:0000178!5.30e-09!15;UBERON:0000179!5.30e-09!15;UBERON:0000463!5.30e-09!15;UBERON:0000064!6.90e-08!219;UBERON:0004111!1.06e-07!241;UBERON:0000477!4.39e-07!286;UBERON:0000025!6.45e-07!194 | |ontology_enrichment_uberon=UBERON:0007023!1.51e-40!115;UBERON:0001049!2.54e-26!57;UBERON:0005068!2.54e-26!57;UBERON:0006241!2.54e-26!57;UBERON:0007135!2.54e-26!57;UBERON:0001017!5.43e-23!82;UBERON:0005743!7.16e-23!86;UBERON:0003075!7.25e-23!86;UBERON:0007284!7.25e-23!86;UBERON:0002616!8.04e-23!59;UBERON:0002020!4.93e-21!34;UBERON:0003528!4.93e-21!34;UBERON:0003080!4.97e-21!42;UBERON:0002780!6.05e-21!41;UBERON:0001890!6.05e-21!41;UBERON:0006240!6.05e-21!41;UBERON:0001893!6.45e-21!34;UBERON:0002346!7.68e-21!90;UBERON:0000955!8.58e-21!69;UBERON:0006238!8.58e-21!69;UBERON:0001869!1.71e-20!32;UBERON:0002791!3.40e-20!33;UBERON:0000073!1.64e-19!94;UBERON:0001016!1.64e-19!94;UBERON:0000153!2.06e-19!129;UBERON:0007811!2.06e-19!129;UBERON:0003056!2.30e-19!61;UBERON:0000033!8.24e-18!123;UBERON:0000956!6.38e-17!25;UBERON:0000203!6.38e-17!25;UBERON:0002619!2.53e-15!22;UBERON:0004121!7.90e-15!169;UBERON:0001950!4.23e-14!20;UBERON:0000924!7.16e-14!173;UBERON:0006601!7.16e-14!173;UBERON:0000178!5.30e-09!15;UBERON:0000179!5.30e-09!15;UBERON:0000463!5.30e-09!15;UBERON:0000064!6.90e-08!219;UBERON:0004111!1.06e-07!241;UBERON:0000477!4.39e-07!286;UBERON:0000025!6.45e-07!194 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.49e-23;32!UBERON:0003528;1.09e-22;34!UBERON:0002020;1.09e-22;34!UBERON:0002791;1.22e-22;32!UBERON:0001893;1.41e-22;34!UBERON:0000956;6.34e-21;25!UBERON:0000203;6.34e-21;25!UBERON:0002619;6.56e-19;22!UBERON:0002780;1.81e-18;41!UBERON:0001890;1.81e-18;41!UBERON:0001950;2.31e-17;20!UBERON:0000073;1.34e-16;53!UBERON:0002616;1.34e-16;53!UBERON:0001017;3.82e-12;75!UBERON:0000955;1.22e-11;68!UBERON:0000178;6.34e-11;15!UBERON:0000179;6.34e-11;15!UBERON:0000463;6.34e-11;15!UBERON:0007023;1.06e-10;114!UBERON:0001016;1.53e-09;83!UBERON:0002420;4.53e-07;9!UBERON:0007245;4.53e-07;9!UBERON:0010009;4.53e-07;9!UBERON:0010011;4.53e-07;9!UBERON:0000454;4.53e-07;9!UBERON:0000200;6.15e-07;6!UBERON:0001871;7.87e-07;6 | |||
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| ||
|short_description=p2@HOPX | |short_description=p2@HOPX | ||
}} | }} | ||
Latest revision as of 02:51, 18 September 2015
| Short description: | p2@HOPX |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_HOPX_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 446bp_to_ENST00000503639_5end |
| EntrezGene: | HOPX |
| HGNC: | 24961 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CD8-positive, alpha-beta T cell | 5.93e-11 | 11 |
| mature alpha-beta T cell | 1.50e-10 | 18 |
| alpha-beta T cell | 1.50e-10 | 18 |
| immature T cell | 1.50e-10 | 18 |
| mature T cell | 1.50e-10 | 18 |
| immature alpha-beta T cell | 1.50e-10 | 18 |
| T cell | 6.63e-08 | 25 |
| pro-T cell | 6.63e-08 | 25 |