FFCP PHASE1:Hg19::chr12:32552451..32552508,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=121512 | |EntrezGene=121512 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19125 | |HGNC=19125 | ||
|TSSclassifier=strong | |||
|UniProt=F8VWL3 | |UniProt=F8VWL3 | ||
|association_with_transcript=0bp_to_ENST00000534526_5end | |association_with_transcript=0bp_to_ENST00000534526_5end | ||
|cluster_id=chr12:32552451..32552508,+ | |||
|coexpression_cluster_id=C3278 | |coexpression_cluster_id=C3278 | ||
|description=CAGE_peak_2_at_FGD4_5end | |description=CAGE_peak_2_at_FGD4_5end | ||
|id=chr12:32552451..32552508,+ | |id=chr12:32552451..32552508,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.96e-25!254;CL:0002139!5.49e-09!24;CL:0000071!2.06e-07!18;CL:0002546!2.06e-07!18;CL:0000076!2.39e-07!62;CL:0000115!3.46e-07!35 | |ontology_enrichment_celltype=CL:0000066!2.96e-25!254;CL:0002139!5.49e-09!24;CL:0000071!2.06e-07!18;CL:0002546!2.06e-07!18;CL:0000076!2.39e-07!62;CL:0000115!3.46e-07!35 | ||
|ontology_enrichment_celltype_v019=CL:0002139;7.65e-10;24!CL:0000071;3.79e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.75e-26,253;CL:0002139,8.53e-10,24;CL:0000071,4.72e-08,18;CL:0002546,4.72e-08,18;CL:0000076,1.05e-07,63;CL:0000115,1.23e-07,36;CL:0002076,2.01e-07,42;CL:0002078,2.71e-07,45;CL:0000223,4.29e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002546;3.79e-08;18!UBERON:0009117;4.13e-07;10!UBERON:0005564;4.13e-07;10 | |||
|ontology_enrichment_disease=DOID:305!2.56e-09!106;DOID:299!7.62e-07!25 | |ontology_enrichment_disease=DOID:305!2.56e-09!106;DOID:299!7.62e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:299;2.22e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.08e-08,106;DOID:299,2.01e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.27e-28!115;UBERON:0000468!2.53e-17!659;UBERON:0000922!7.02e-17!612;UBERON:0000062!8.32e-17!511;UBERON:0004111!3.51e-15!241;UBERON:0002050!4.73e-14!605;UBERON:0005423!4.73e-14!605;UBERON:0000467!5.23e-14!625;UBERON:0000477!6.79e-14!286;UBERON:0000480!7.11e-14!626;UBERON:0000923!1.05e-13!604;UBERON:0005291!1.05e-13!604;UBERON:0006598!1.05e-13!604;UBERON:0002532!1.05e-13!604;UBERON:0001049!4.65e-13!57;UBERON:0005068!4.65e-13!57;UBERON:0006241!4.65e-13!57;UBERON:0007135!4.65e-13!57;UBERON:0000064!5.59e-13!219;UBERON:0003075!5.89e-13!86;UBERON:0007284!5.89e-13!86;UBERON:0002616!3.34e-12!59;UBERON:0000025!5.96e-12!194;UBERON:0002346!2.65e-11!90;UBERON:0005743!7.59e-11!86;UBERON:0001017!1.46e-10!82;UBERON:0000033!2.08e-10!123;UBERON:0004121!2.58e-10!169;UBERON:0000153!2.84e-10!129;UBERON:0007811!2.84e-10!129;UBERON:0000955!4.48e-10!69;UBERON:0006238!4.48e-10!69;UBERON:0000466!1.33e-09!126;UBERON:0003080!1.51e-09!42;UBERON:0000483!2.23e-09!309;UBERON:0000924!2.42e-09!173;UBERON:0006601!2.42e-09!173;UBERON:0000119!3.37e-09!312;UBERON:0004119!4.36e-09!169;UBERON:0000925!4.36e-09!169;UBERON:0006595!4.36e-09!169;UBERON:0002780!4.48e-09!41;UBERON:0001890!4.48e-09!41;UBERON:0006240!4.48e-09!41;UBERON:0000481!4.60e-09!347;UBERON:0003056!7.94e-09!61;UBERON:0002020!9.33e-09!34;UBERON:0003528!9.33e-09!34;UBERON:0001893!2.18e-08!34;UBERON:0000073!2.63e-08!94;UBERON:0001016!2.63e-08!94;UBERON:0002791!3.96e-08!33;UBERON:0000464!5.50e-08!104;UBERON:0001869!7.42e-08!32;UBERON:0004921!7.86e-08!129;UBERON:0004185!7.86e-08!129;UBERON:0005177!2.06e-07!107;UBERON:0001986!2.06e-07!18;UBERON:0004638!2.06e-07!18;UBERON:0004852!2.06e-07!18;UBERON:0001007!2.40e-07!155;UBERON:0001555!2.40e-07!155;UBERON:0007026!2.40e-07!155 | |ontology_enrichment_uberon=UBERON:0007023!2.27e-28!115;UBERON:0000468!2.53e-17!659;UBERON:0000922!7.02e-17!612;UBERON:0000062!8.32e-17!511;UBERON:0004111!3.51e-15!241;UBERON:0002050!4.73e-14!605;UBERON:0005423!4.73e-14!605;UBERON:0000467!5.23e-14!625;UBERON:0000477!6.79e-14!286;UBERON:0000480!7.11e-14!626;UBERON:0000923!1.05e-13!604;UBERON:0005291!1.05e-13!604;UBERON:0006598!1.05e-13!604;UBERON:0002532!1.05e-13!604;UBERON:0001049!4.65e-13!57;UBERON:0005068!4.65e-13!57;UBERON:0006241!4.65e-13!57;UBERON:0007135!4.65e-13!57;UBERON:0000064!5.59e-13!219;UBERON:0003075!5.89e-13!86;UBERON:0007284!5.89e-13!86;UBERON:0002616!3.34e-12!59;UBERON:0000025!5.96e-12!194;UBERON:0002346!2.65e-11!90;UBERON:0005743!7.59e-11!86;UBERON:0001017!1.46e-10!82;UBERON:0000033!2.08e-10!123;UBERON:0004121!2.58e-10!169;UBERON:0000153!2.84e-10!129;UBERON:0007811!2.84e-10!129;UBERON:0000955!4.48e-10!69;UBERON:0006238!4.48e-10!69;UBERON:0000466!1.33e-09!126;UBERON:0003080!1.51e-09!42;UBERON:0000483!2.23e-09!309;UBERON:0000924!2.42e-09!173;UBERON:0006601!2.42e-09!173;UBERON:0000119!3.37e-09!312;UBERON:0004119!4.36e-09!169;UBERON:0000925!4.36e-09!169;UBERON:0006595!4.36e-09!169;UBERON:0002780!4.48e-09!41;UBERON:0001890!4.48e-09!41;UBERON:0006240!4.48e-09!41;UBERON:0000481!4.60e-09!347;UBERON:0003056!7.94e-09!61;UBERON:0002020!9.33e-09!34;UBERON:0003528!9.33e-09!34;UBERON:0001893!2.18e-08!34;UBERON:0000073!2.63e-08!94;UBERON:0001016!2.63e-08!94;UBERON:0002791!3.96e-08!33;UBERON:0000464!5.50e-08!104;UBERON:0001869!7.42e-08!32;UBERON:0004921!7.86e-08!129;UBERON:0004185!7.86e-08!129;UBERON:0005177!2.06e-07!107;UBERON:0001986!2.06e-07!18;UBERON:0004638!2.06e-07!18;UBERON:0004852!2.06e-07!18;UBERON:0001007!2.40e-07!155;UBERON:0001555!2.40e-07!155;UBERON:0007026!2.40e-07!155 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;2.56e-08;114!UBERON:0004638;3.79e-08;18!UBERON:0001986;3.79e-08;18!UBERON:0004852;3.79e-08;18!UBERON:0004921;1.67e-07;33!UBERON:0003528;1.75e-07;34!UBERON:0002020;1.75e-07;34!UBERON:0001893;2.04e-07;34!UBERON:0002791;3.90e-07;32!UBERON:0001869;4.94e-07;32!UBERON:0000490;6.11e-07;33!UBERON:0002780;9.38e-07;41!UBERON:0001890;9.38e-07;41!UBERON:0003135;9.87e-07;11 | |||
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| ||
|short_description=p2@FGD4 | |short_description=p2@FGD4 | ||
}} | }} |
Latest revision as of 04:58, 18 September 2015
Short description: | p2@FGD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FGD4_5end |
Coexpression cluster: | C3278_testicular_small_colon_amniotic_seminal_Endothelial_stomach |
Association with transcript: | 0bp_to_ENST00000534526_5end |
EntrezGene: | FGD4 |
HGNC: | 19125 |
UniProt: | F8VWL3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.75e-26 | 253 |
endothelial cell of vascular tree | 8.53e-10 | 24 |
blood vessel endothelial cell | 4.72e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.72e-08 | 18 |
squamous epithelial cell | 1.05e-07 | 63 |
endothelial cell | 1.23e-07 | 36 |
endo-epithelial cell | 2.01e-07 | 42 |
meso-epithelial cell | 2.71e-07 | 45 |
endodermal cell | 4.29e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.08e-08 | 106 |
adenocarcinoma | 2.01e-07 | 25 |