FFCP PHASE1:Hg19::chr2:175711945..175711971,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:175711945..175711971,- to FFCP PHASE1:Hg19::chr2:175711945..175711971,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1123 | |EntrezGene=1123 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1943 | |HGNC=1943 | ||
|TSSclassifier=strong | |||
|UniProt=C9J1N1 | |UniProt=C9J1N1 | ||
|association_with_transcript=-19bp_to_ENST00000444573_5end | |||
|cluster_id=chr2:175711945..175711971,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_5_at_CHN1_5end | |||
|id=chr2:175711945..175711971,- | |||
|ontology_enrichment_celltype=CL:0002620!1.39e-12!23;CL:0000057!2.97e-12!75;CL:0000055!2.85e-10!180 | |||
|ontology_enrichment_celltype_v019=CL:0002620;5.98e-09;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,6.53e-09,23;CL:0002559,6.82e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.81e-10;82!UBERON:0006215;2.71e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.51e-10;5!DOID:450;1.51e-10;5!DOID:66;1.51e-10;5!DOID:423;1.51e-10;5!DOID:0080000;1.51e-10;5!DOID:11722;1.51e-10;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.12e-10,5;DOID:450,1.12e-10,5;DOID:66,1.12e-10,5;DOID:423,1.12e-10,5;DOID:0080000,1.12e-10,5;DOID:11722,1.12e-10,5 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.48e-35!57;UBERON:0005068!1.48e-35!57;UBERON:0006241!1.48e-35!57;UBERON:0007135!1.48e-35!57;UBERON:0002616!4.49e-35!59;UBERON:0000955!7.69e-32!69;UBERON:0006238!7.69e-32!69;UBERON:0002780!6.46e-31!41;UBERON:0001890!6.46e-31!41;UBERON:0006240!6.46e-31!41;UBERON:0001017!2.00e-30!82;UBERON:0003080!8.77e-30!42;UBERON:0005743!7.98e-29!86;UBERON:0000073!2.61e-26!94;UBERON:0001016!2.61e-26!94;UBERON:0001893!2.27e-25!34;UBERON:0002020!2.95e-25!34;UBERON:0003528!2.95e-25!34;UBERON:0003075!3.42e-25!86;UBERON:0007284!3.42e-25!86;UBERON:0001869!1.82e-24!32;UBERON:0002791!2.25e-24!33;UBERON:0002346!4.73e-23!90;UBERON:0000033!1.99e-22!123;UBERON:0003056!2.03e-21!61;UBERON:0000153!3.89e-21!129;UBERON:0007811!3.89e-21!129;UBERON:0007023!1.05e-18!115;UBERON:0000956!6.32e-18!25;UBERON:0000203!6.32e-18!25;UBERON:0004121!6.77e-17!169;UBERON:0002619!1.03e-16!22;UBERON:0000924!7.15e-16!173;UBERON:0006601!7.15e-16!173;UBERON:0000475!9.01e-16!365;UBERON:0001950!6.95e-15!20;UBERON:0002420!3.70e-09!9;UBERON:0007245!3.70e-09!9;UBERON:0010009!3.70e-09!9;UBERON:0010011!3.70e-09!9;UBERON:0000454!3.70e-09!9;UBERON:0002308!7.76e-09!9;UBERON:0000125!7.76e-09!9;UBERON:0002199!1.09e-08!45;UBERON:0002416!1.09e-08!45;UBERON:0000200!1.59e-07!6;UBERON:0002097!1.69e-07!40;UBERON:0009663!3.17e-07!7;UBERON:0003076!3.27e-07!15;UBERON:0003057!3.27e-07!15;UBERON:0001894!6.09e-07!7;UBERON:0006222!6.09e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.32e-43;32!UBERON:0001893;4.97e-43;34!UBERON:0003528;9.36e-42;34!UBERON:0002020;9.36e-42;34!UBERON:0002780;9.43e-41;41!UBERON:0001890;9.43e-41;41!UBERON:0002791;2.65e-40;32!UBERON:0002619;2.59e-35;22!UBERON:0000073;5.06e-35;53!UBERON:0002616;5.06e-35;53!UBERON:0000956;6.92e-34;25!UBERON:0000203;6.92e-34;25!UBERON:0001950;3.98e-31;20!UBERON:0000955;9.96e-26;68!UBERON:0001017;1.36e-24;75!UBERON:0001016;3.56e-17;83!UBERON:0002420;1.42e-16;9!UBERON:0007245;1.42e-16;9!UBERON:0010009;1.42e-16;9!UBERON:0010011;1.42e-16;9!UBERON:0000454;1.42e-16;9!UBERON:0000125;7.94e-16;9!UBERON:0002308;7.94e-16;9!UBERON:0000200;3.67e-15;6!UBERON:0000349;1.21e-12;5!UBERON:0009663;2.99e-12;7!UBERON:0001894;5.44e-11;7!UBERON:0000369;1.04e-10;4!UBERON:0002435;1.04e-10;4!UBERON:0000204;1.04e-10;4!UBERON:0007023;8.10e-10;114!UBERON:0002784;4.53e-09;4!UBERON:0001871;5.89e-09;6!UBERON:0001870;1.68e-08;3!UBERON:0002021;1.88e-08;5!UBERON:0005383;1.96e-08;3!UBERON:0005382;1.96e-08;3!UBERON:0001872;1.99e-08;5!UBERON:0002680;2.07e-08;9!UBERON:0001895;2.07e-08;9!UBERON:0011216;2.72e-08;132!UBERON:0004733;3.15e-08;12!UBERON:0002028;3.15e-08;12!UBERON:0004732;1.65e-07;13!UBERON:0000988;2.25e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.31e-64,53;UBERON:0002616,3.31e-64,53;UBERON:0001049,3.54e-63,56;UBERON:0005068,3.54e-63,56;UBERON:0006241,3.54e-63,56;UBERON:0007135,3.54e-63,56;UBERON:0002780,3.61e-58,41;UBERON:0001890,3.61e-58,41;UBERON:0003080,3.61e-58,41;UBERON:0006240,3.61e-58,41;UBERON:0000955,1.88e-57,68;UBERON:0006238,1.88e-57,68;UBERON:0001017,2.18e-53,81;UBERON:0001893,1.37e-48,34;UBERON:0001869,1.53e-48,32;UBERON:0003528,2.39e-48,34;UBERON:0002020,2.39e-48,34;UBERON:0001016,9.30e-47,89;UBERON:0002791,1.23e-44,32;UBERON:0003075,2.45e-39,82;UBERON:0007284,2.45e-39,82;UBERON:0002346,6.06e-37,86;UBERON:0003056,6.25e-36,61;UBERON:0002619,2.62e-35,22;UBERON:0010371,4.56e-35,104;UBERON:0000956,7.64e-34,25;UBERON:0000203,7.64e-34,25;UBERON:0001950,3.97e-31,20;UBERON:0007023,4.72e-30,114;UBERON:0010314,2.69e-29,132;UBERON:0004121,1.25e-28,171;UBERON:0000924,1.25e-28,171;UBERON:0006601,1.25e-28,171;UBERON:0011216,1.08e-16,223;UBERON:0002420,1.58e-16,9;UBERON:0007245,1.58e-16,9;UBERON:0010009,1.58e-16,9;UBERON:0010011,1.58e-16,9;UBERON:0000454,1.58e-16,9;UBERON:0000125,7.57e-16,9;UBERON:0002308,7.57e-16,9;UBERON:0000200,3.80e-15,6;UBERON:0000349,1.23e-12,5;UBERON:0009663,3.30e-12,7;UBERON:0000025,6.13e-11,192;UBERON:0001894,9.91e-11,7;UBERON:0006222,9.91e-11,7;UBERON:0000369,1.07e-10,4;UBERON:0002435,1.07e-10,4;UBERON:0000204,1.07e-10,4;UBERON:0010082,1.07e-10,4;UBERON:0001871,5.92e-09,6;UBERON:0004111,6.99e-09,240;UBERON:0002784,8.07e-09,4;UBERON:0002680,1.56e-08,9;UBERON:0001895,1.56e-08,9;UBERON:0010092,1.56e-08,9;UBERON:0001870,1.67e-08,3;UBERON:0002021,1.85e-08,5;UBERON:0001872,2.00e-08,5;UBERON:0005383,2.02e-08,3;UBERON:0005382,2.02e-08,3;UBERON:0004733,2.51e-08,12;UBERON:0002028,2.51e-08,12;UBERON:0007277,2.51e-08,12;UBERON:0003076,3.04e-08,15;UBERON:0003057,3.04e-08,15;UBERON:0002097,5.27e-08,41;UBERON:0004732,1.34e-07,13;UBERON:0000988,1.91e-07,3;UBERON:0000483,2.10e-07,306;UBERON:0000119,3.24e-07,309;UBERON:0002073,6.82e-07,5;UBERON:0005086,6.82e-07,5;UBERON:0002199,8.91e-07,46;UBERON:0002416,8.91e-07,46 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.281908808191942,0,0.446961094427288,0,0,0.631719873426831,0.522371256399677,0,0,0,0,0.123766352960047,0,0,0,0,0,0.492484232307152,0,0,2.0036519099174,0.136874425072884,0.251085279189606,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786839080455332,0.393010762749165,1.23360899399706,0.167186495390678,0.32592226663359,0.946895611469467,0,0,1.47302953737419,0.664601683750863,0.270803863765016,0,0,0,0,0,0,0.267540828089713,0,0,1.91610246800961,0.68725489096526,0,0.318565414324097,0,0,0.301150238155546,0.127986611154418,0,0.236777252044017,0,0,0.534880391567015,0,0,2.01210257911091,0,0,0,0,0.795285947051099,0,0.567208902984407,0,0.43917392846563,2.48860243445654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0.622422070799533,0,0,0.151357427644931,0,0,0.936480230490962,0.570471821544449,0.747243402759005,0.117434498643765,0.323745888736263,0.140450806702248,1.02077085627447,0.368502951935304,0.309977343527296,4.75201142912821,1.7308685049499,0,0,0.336672227908132,0.500474079487857,0.277064115484183,2.19488810440419,3.37136575378922,0.45071417671979,0,1.07633781413317,2.77624605464138,1.48352330811693,1.50045548042201,2.06105058476878,0.772921620136887,3.16398655763703,0.337552664482532,2.24105111870757,0.757301322732344,2.11714766877288,1.45481451136931,1.06502877754984,1.0075209822764,0.508681776931463,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,1.28648187638577,1.38134921352481,1.85747171212792,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0.231860809950154,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47798971368783,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0,0,0.4400297149257,1.80980402060889,0,0,0.531876233169741,0,0.257207374262142,0,0.266422179016099,0.714889968290738,0.542621605391443,0,1.62868092146868,0.355391948742546,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,0.434343920002738,0,1.25342674267927,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0,0.207970861530807,0.713715955188647,0.473107245101804,0,0.601892199455438,0,1.03473071292505,0,0,1.65078867489357,0,0.343143423810856,0.82707210449155,0,0.106727557803444,0,0,0,0.248107807818777,1.38115775959256,0.280660094433074,0,1.02341449813341,0.321707842287215,0,0.462629081407967,0.355123450626254,0.410635780069046,0.519254429183621,0.232420756919918,0,0,0,1.03333003348146,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.193341436584244,0.308097234229289,0.460511024178389,0.275673144969061,0.859361958946189,0,0.170453254832202,0.534192213880424,0,0,0,0,0,0,0,0,0,0,0,0,0.744316738719335,0.632758849437452,1.90630193923825,0,0.42793898803392,0,0,0.719489830333259,0.54907405947211,0.353437207037059,0,0,0,0,0,0,0.9554993798559,0.565621727814851,0,0,0,0,0,1.9676842561399,0.202910376962704,0,0,0.573645408816206,0.392996164052485,0,0.354761064070598,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,1.01489521846434,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,40.7600535584182,8.8621732338623,0,0,0,0,0.276283915531148,0,1.1249555075237,0,0.311039587661807,0,0,0,0.197286811273867,0,0,10.6626602070474,37.2000073629024,0,0,0,0,0,0,0,0,0,0.173624994933292,32.772431275112,13.3862046874203,4.5774520895125,2.10100593869327,1.77328571372128,14.0406654178542,0,0,0,0,0,0,0,0,0.274792780205587,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889563386041866,0.494255755786011,0.104421949505455,1.34802265961354,0,21.0838001152805,0,0,0,0,0,0,1.0741718536843,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,6.87944129886466,0,0,0,0.193978032976839,0.529536760149002,0.677942222341597,0.137041924646751,0,33.9978974283069,0,0,0,0.19980960958213,0,0,0,0,0,0,0.135904206073614,0,0,0,9.60672461935663,1.23214841002794,0,0,0.262887354279314,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,20.6759719350419,5.5843396505746,0,0,0,0,0,24.725069559816,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0.113312091520126,0,0,2.19781025814636,1.45455861916959,0,0,0.106787412567695,0.471612915298998,0,0,0,0,0,0,0,0,0,0,44.3034089983493,45.3937705435303,13.520620516302,0,0.554645257684261,2.11127770000704,0,0,0,0,0,0,0,0.895528817321244,1.63599316893057,0,0,0.50313580350515,0,0,0,0.15543720058278,0,0.318593534327405,0,0.465788870628778,0,1.06336685823198,0.521745061811734,0,0,1.22061219961398,0.727394636810238,0.214821114084977,0,3.18476710958893,0.800055529326307,1.03018711554838,0.336749488765919,0,0,0,0,0.226705925512272,0.694567422971502,0,0,0,0,0.176689145945881,0,0,0,0,0,13.1345514344144,0,0,0,0,0,0,0.79994958341972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,3.3687002508852,26.3982115146449,60.9295278200015,7.18352365757181,31.9981528215578,0,14.1080795027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| ||
|short_description=p5@CHN1 | |||
}} | }} |
Latest revision as of 08:01, 18 September 2015
Short description: | p5@CHN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CHN1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -19bp_to_ENST00000444573_5end |
EntrezGene: | CHN1 |
HGNC: | 1943 |
UniProt: | C9J1N1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 6.53e-09 | 23 |
hair follicle cell | 6.82e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.12e-10 | 5 |
myotonic disease | 1.12e-10 | 5 |
muscle tissue disease | 1.12e-10 | 5 |
myopathy | 1.12e-10 | 5 |
muscular disease | 1.12e-10 | 5 |
myotonic dystrophy | 1.12e-10 | 5 |