FFCP PHASE1:Hg19::chr5:61601965..61602002,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:61601965..61602002,+ to FFCP PHASE1:Hg19::chr5:61601965..61602002,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3796 | |EntrezGene=3796 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6318 | |HGNC=6318 | ||
|TSSclassifier=strong | |||
|UniProt=O00139,E9PB70,B0AZS5 | |UniProt=O00139,E9PB70,B0AZS5 | ||
|association_with_transcript=0bp_to_ENST00000401507,NM_001098511,NM_001243952,NM_001243953,NM_004520,uc003jsx.3,uc003jsy.3,uc003jsz.3,uc010iwp.2_5end | |||
|cluster_id=chr5:61601965..61602002,+ | |||
|description=CAGE_peak_4_at_KIF2A_5end | |||
|id=chr5:61601965..61602002,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.07e-09;82 | |||
|ontology_enrichment_disease=DOID:162!2.70e-20!235;DOID:14566!8.35e-20!239;DOID:2531!3.11e-13!51;DOID:0060083!3.11e-13!51;DOID:0050686!5.98e-12!137;DOID:1240!3.41e-11!39;DOID:0050687!1.20e-09!143;DOID:8692!1.61e-08!31;DOID:3095!9.44e-07!22;DOID:2994!9.44e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:1240;7.30e-09;39!DOID:2531;2.15e-08;51!DOID:0060083;2.15e-08;51!DOID:8692;2.30e-08;31!DOID:3095;7.82e-07;22!DOID:2994;7.82e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.55e-20,235;DOID:14566,7.90e-20,239;DOID:2531,3.03e-13,51;DOID:0060083,3.03e-13,51;DOID:0050686,5.76e-12,137;DOID:1240,3.34e-11,39;DOID:0050687,1.11e-09,143;DOID:8692,1.59e-08,31;DOID:3095,9.33e-07,22;DOID:2994,9.33e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!8.86e-30!94;UBERON:0001016!8.86e-30!94;UBERON:0001017!1.40e-28!82;UBERON:0005743!2.20e-27!86;UBERON:0001049!8.74e-26!57;UBERON:0005068!8.74e-26!57;UBERON:0006241!8.74e-26!57;UBERON:0007135!8.74e-26!57;UBERON:0000955!5.89e-23!69;UBERON:0006238!5.89e-23!69;UBERON:0003080!4.71e-22!42;UBERON:0002780!7.86e-22!41;UBERON:0001890!7.86e-22!41;UBERON:0006240!7.86e-22!41;UBERON:0007023!1.88e-20!115;UBERON:0002616!1.36e-19!59;UBERON:0002020!1.17e-18!34;UBERON:0003528!1.17e-18!34;UBERON:0001893!2.27e-18!34;UBERON:0002346!2.97e-18!90;UBERON:0001869!4.16e-18!32;UBERON:0002791!8.39e-18!33;UBERON:0003075!1.30e-17!86;UBERON:0007284!1.30e-17!86;UBERON:0003056!1.22e-14!61;UBERON:0000924!1.55e-14!173;UBERON:0006601!1.55e-14!173;UBERON:0000956!2.49e-14!25;UBERON:0000203!2.49e-14!25;UBERON:0004121!6.76e-14!169;UBERON:0002619!8.96e-14!22;UBERON:0000153!5.31e-13!129;UBERON:0007811!5.31e-13!129;UBERON:0001950!1.61e-12!20;UBERON:0000033!6.83e-12!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.55e-16;32!UBERON:0003528;2.28e-16;34!UBERON:0002020;2.28e-16;34!UBERON:0001893;3.52e-16;34!UBERON:0002791;4.56e-16;32!UBERON:0002780;6.86e-16;41!UBERON:0001890;6.86e-16;41!UBERON:0000956;2.23e-14;25!UBERON:0000203;2.23e-14;25!UBERON:0000073;2.86e-14;53!UBERON:0002616;2.86e-14;53!UBERON:0002619;6.80e-14;22!UBERON:0001950;1.28e-12;20!UBERON:0000955;2.11e-11;68!UBERON:0001016;3.86e-11;83!UBERON:0001017;8.22e-11;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.12e-30,89;UBERON:0001017,2.58e-28,81;UBERON:0001049,1.47e-25,56;UBERON:0005068,1.47e-25,56;UBERON:0006241,1.47e-25,56;UBERON:0007135,1.47e-25,56;UBERON:0000073,8.34e-24,53;UBERON:0002616,8.34e-24,53;UBERON:0000955,1.07e-22,68;UBERON:0006238,1.07e-22,68;UBERON:0002780,7.52e-22,41;UBERON:0001890,7.52e-22,41;UBERON:0003080,7.52e-22,41;UBERON:0006240,7.52e-22,41;UBERON:0007023,6.52e-20,114;UBERON:0003528,1.13e-18,34;UBERON:0002020,1.13e-18,34;UBERON:0001893,2.18e-18,34;UBERON:0001869,4.01e-18,32;UBERON:0002791,1.76e-17,32;UBERON:0002346,1.04e-16,86;UBERON:0003075,4.50e-16,82;UBERON:0007284,4.50e-16,82;UBERON:0003056,5.56e-15,61;UBERON:0000956,2.43e-14,25;UBERON:0000203,2.43e-14,25;UBERON:0002619,8.73e-14,22;UBERON:0011216,1.58e-13,223;UBERON:0004121,9.58e-13,171;UBERON:0000924,9.58e-13,171;UBERON:0006601,9.58e-13,171;UBERON:0001950,1.57e-12,20;UBERON:0010371,8.57e-10,104;UBERON:0010314,3.71e-09,132 | |||
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| ||
|short_description=p4@KIF2A | |||
}} | }} |
Latest revision as of 09:16, 18 September 2015
Short description: | p4@KIF2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_KIF2A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000401507, NM_001098511, NM_001243952, NM_001243953, NM_004520, uc003jsx.3, uc003jsy.3, uc003jsz.3, uc010iwp.2_5end |
EntrezGene: | KIF2A |
HGNC: | 6318 |
UniProt: | O00139E9PB70B0AZS5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cancer | 2.55e-20 | 235 |
disease of cellular proliferation | 7.90e-20 | 239 |
hematologic cancer | 3.03e-13 | 51 |
immune system cancer | 3.03e-13 | 51 |
organ system cancer | 5.76e-12 | 137 |
leukemia | 3.34e-11 | 39 |
cell type cancer | 1.11e-09 | 143 |
myeloid leukemia | 1.59e-08 | 31 |
germ cell and embryonal cancer | 9.33e-07 | 22 |
germ cell cancer | 9.33e-07 | 22 |