FFCP PHASE1:Hg19::chr12:45269990..45270001,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4753 | |EntrezGene=4753 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7751 | |HGNC=7751 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=67bp_to_ENST00000546415_5end | |association_with_transcript=67bp_to_ENST00000546415_5end | ||
|cluster_id=chr12:45269990..45270001,- | |||
|coexpression_cluster_id=C1015 | |||
|description=CAGE_peak_4_at_NELL2_5end | |description=CAGE_peak_4_at_NELL2_5end | ||
|id=chr12:45269990..45270001,- | |id=chr12:45269990..45270001,- | ||
|ontology_enrichment_celltype=CL:0000791!1.54e-14!18;CL:0000789!1.54e-14!18;CL:0002420!1.54e-14!18;CL:0002419!1.54e-14!18;CL:0000790!1.54e-14!18;CL:0000625!2.32e-14!11;CL:0000084!4.35e-09!25;CL:0000827!4.35e-09!25;CL:0000540!7.20e-08!6;CL:0000031!7.20e-08!6;CL:0000404!7.20e-08!6;CL:0000047!1.42e-07!8 | |ontology_enrichment_celltype=CL:0000791!1.54e-14!18;CL:0000789!1.54e-14!18;CL:0002420!1.54e-14!18;CL:0002419!1.54e-14!18;CL:0000790!1.54e-14!18;CL:0000625!2.32e-14!11;CL:0000084!4.35e-09!25;CL:0000827!4.35e-09!25;CL:0000540!7.20e-08!6;CL:0000031!7.20e-08!6;CL:0000404!7.20e-08!6;CL:0000047!1.42e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000625;4.72e-19;11!CL:0000791;2.42e-18;18!CL:0000789;2.42e-18;18!CL:0002419;2.42e-18;18!CL:0000084;3.24e-12;25!CL:0000540;8.09e-12;6!CL:0000404;8.09e-12;6!CL:0002322;3.68e-09;5!CL:0002321;3.51e-07;15!CL:0000226;8.89e-07;3!CL:0000842;8.89e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,4.90e-19,11;CL:0000791,2.95e-18,18;CL:0000789,2.95e-18,18;CL:0002420,2.95e-18,18;CL:0002419,2.95e-18,18;CL:0000790,2.95e-18,18;CL:0000084,3.71e-12,25;CL:0000827,3.71e-12,25;CL:0000540,7.66e-12,6;CL:0000031,7.66e-12,6;CL:0000404,7.66e-12,6;CL:0000047,1.15e-11,8;CL:0002322,3.66e-09,5;CL:0000226,8.74e-07,3;CL:0000842,8.74e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;2.42e-18;18!CL:0000031;8.09e-12;6!UBERON:0006601;1.85e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.44e-41!94;UBERON:0001016!3.44e-41!94;UBERON:0005743!7.59e-41!86;UBERON:0001049!1.34e-40!57;UBERON:0005068!1.34e-40!57;UBERON:0006241!1.34e-40!57;UBERON:0007135!1.34e-40!57;UBERON:0001017!2.75e-39!82;UBERON:0002780!1.39e-35!41;UBERON:0001890!1.39e-35!41;UBERON:0006240!1.39e-35!41;UBERON:0002346!9.67e-35!90;UBERON:0003080!2.02e-34!42;UBERON:0002616!1.29e-33!59;UBERON:0003075!8.06e-33!86;UBERON:0007284!8.06e-33!86;UBERON:0003056!3.69e-31!61;UBERON:0000955!1.23e-30!69;UBERON:0006238!1.23e-30!69;UBERON:0001869!2.67e-30!32;UBERON:0001893!7.82e-30!34;UBERON:0002020!1.89e-29!34;UBERON:0003528!1.89e-29!34;UBERON:0002791!1.07e-28!33;UBERON:0002619!6.92e-28!22;UBERON:0000956!1.62e-27!25;UBERON:0000203!1.62e-27!25;UBERON:0001950!1.35e-25!20;UBERON:0007023!7.34e-25!115;UBERON:0000924!3.24e-22!173;UBERON:0006601!3.24e-22!173;UBERON:0000153!1.20e-21!129;UBERON:0007811!1.20e-21!129;UBERON:0004121!1.17e-20!169;UBERON:0000033!3.75e-20!123;UBERON:0001871!1.48e-10!7;UBERON:0000200!2.06e-08!6;UBERON:0003076!1.03e-07!15;UBERON:0003057!1.03e-07!15;UBERON:0002021!2.73e-07!5;UBERON:0001872!2.80e-07!5;UBERON:0000349!2.98e-07!5;UBERON:0001894!4.27e-07!7;UBERON:0006222!4.27e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.30e-44;22!UBERON:0001950;7.08e-41;20!UBERON:0001869;2.59e-39;32!UBERON:0000956;1.29e-38;25!UBERON:0000203;1.29e-38;25!UBERON:0002791;1.02e-36;32!UBERON:0003528;7.76e-36;34!UBERON:0002020;7.76e-36;34!UBERON:0001893;2.37e-35;34!UBERON:0002780;1.27e-26;41!UBERON:0001890;1.27e-26;41!UBERON:0000073;2.32e-18;53!UBERON:0002616;2.32e-18;53!UBERON:0001871;1.44e-14;6!UBERON:0000955;5.84e-13;68!UBERON:0000200;8.52e-13;6!UBERON:0001017;4.41e-12;75!UBERON:0001016;6.29e-11;83!UBERON:0002021;7.26e-11;5!UBERON:0001872;7.41e-11;5!UBERON:0000349;8.94e-11;5!UBERON:0000369;2.39e-08;4!UBERON:0002435;2.39e-08;4!UBERON:0000204;2.39e-08;4!UBERON:0002420;1.18e-07;9!UBERON:0007245;1.18e-07;9!UBERON:0010009;1.18e-07;9!UBERON:0010011;1.18e-07;9!UBERON:0000454;1.18e-07;9!UBERON:0001870;2.25e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.46e-44,22;UBERON:0001869,4.60e-44,32;UBERON:0001893,4.92e-41,34;UBERON:0001950,8.27e-41,20;UBERON:0002791,1.12e-40,32;UBERON:0003528,1.31e-40,34;UBERON:0002020,1.31e-40,34;UBERON:0000956,1.42e-38,25;UBERON:0000203,1.42e-38,25;UBERON:0002780,9.61e-38,41;UBERON:0001890,9.61e-38,41;UBERON:0003080,9.61e-38,41;UBERON:0006240,9.61e-38,41;UBERON:0001016,1.49e-37,89;UBERON:0001017,1.16e-36,81;UBERON:0000073,2.90e-33,53;UBERON:0002616,2.90e-33,53;UBERON:0001049,4.51e-33,56;UBERON:0005068,4.51e-33,56;UBERON:0006241,4.51e-33,56;UBERON:0007135,4.51e-33,56;UBERON:0000955,3.50e-27,68;UBERON:0006238,3.50e-27,68;UBERON:0003056,1.35e-22,61;UBERON:0002346,5.22e-21,86;UBERON:0003075,1.50e-19,82;UBERON:0007284,1.50e-19,82;UBERON:0004121,2.53e-17,171;UBERON:0000924,2.53e-17,171;UBERON:0006601,2.53e-17,171;UBERON:0010371,1.12e-15,104;UBERON:0011216,2.31e-15,223;UBERON:0001871,1.82e-14,6;UBERON:0000200,1.00e-12,6;UBERON:0007023,2.15e-11,114;UBERON:0002021,6.64e-11,5;UBERON:0001872,6.93e-11,5;UBERON:0000349,7.68e-11,5;UBERON:0010314,1.44e-09,132;UBERON:0000369,1.47e-08,4;UBERON:0002435,1.47e-08,4;UBERON:0000204,1.47e-08,4;UBERON:0010082,1.47e-08,4;UBERON:0002420,8.32e-08,9;UBERON:0007245,8.32e-08,9;UBERON:0010009,8.32e-08,9;UBERON:0010011,8.32e-08,9;UBERON:0000454,8.32e-08,9;UBERON:0001870,2.40e-07,3 | |||
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|short_description=p4@NELL2 | |short_description=p4@NELL2 | ||
}} | }} |
Latest revision as of 09:35, 18 September 2015
Short description: | p4@NELL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NELL2_5end |
Coexpression cluster: | C1015_occipital_neuroectodermal_temporal_parietal_duodenum_brain_small |
Association with transcript: | 67bp_to_ENST00000546415_5end |
EntrezGene: | NELL2 |
HGNC: | 7751 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 4.90e-19 | 11 |
mature alpha-beta T cell | 2.95e-18 | 18 |
alpha-beta T cell | 2.95e-18 | 18 |
immature T cell | 2.95e-18 | 18 |
mature T cell | 2.95e-18 | 18 |
immature alpha-beta T cell | 2.95e-18 | 18 |
T cell | 3.71e-12 | 25 |
pro-T cell | 3.71e-12 | 25 |
neuron | 7.66e-12 | 6 |
neuroblast | 7.66e-12 | 6 |
electrically signaling cell | 7.66e-12 | 6 |
neuronal stem cell | 1.15e-11 | 8 |
embryonic stem cell | 3.66e-09 | 5 |
single nucleate cell | 8.74e-07 | 3 |
mononuclear cell | 8.74e-07 | 3 |