FFCP PHASE1:Hg19::chr7:38671047..38671065,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=273 | |EntrezGene=273 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=471 | |HGNC=471 | ||
|TSSclassifier=strong | |||
|UniProt=E7EMY9,F5H533,F5H6E8 | |UniProt=E7EMY9,F5H533,F5H6E8 | ||
|association_with_transcript=-27bp_to_ENST00000325590,ENST00000353242,ENST00000428293,ENST00000544070,uc003tgu.2,uc003tgv.2_5end | |association_with_transcript=-27bp_to_ENST00000325590,ENST00000353242,ENST00000428293,ENST00000544070,uc003tgu.2,uc003tgv.2_5end | ||
|cluster_id=chr7:38671047..38671065,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_AMPH_5end | |description=CAGE_peak_3_at_AMPH_5end | ||
|id=chr7:38671047..38671065,- | |id=chr7:38671047..38671065,- | ||
|ontology_enrichment_celltype=CL:0002620!4.53e-07!23;CL:0000055!5.00e-07!180;CL:0000057!8.83e-07!75;CL:0000188!8.98e-07!9 | |ontology_enrichment_celltype=CL:0002620!4.53e-07!23;CL:0000055!5.00e-07!180;CL:0000057!8.83e-07!75;CL:0000188!8.98e-07!9 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.88e-15;82!UBERON:0006215;1.36e-11;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002619;7.22e-53;22!UBERON:0001950;1.53e-46;20!UBERON:0000956;3.58e-46;25!UBERON:0000203;3.58e-46;25!UBERON:0001869;1.45e-42;32!UBERON:0003528;4.82e-42;34!UBERON:0002020;4.82e-42;34!UBERON:0002780;2.58e-39;41!UBERON:0001890;2.58e-39;41!UBERON:0000073;6.83e-39;53!UBERON:0002616;6.83e-39;53!UBERON:0002791;3.95e-38;32!UBERON:0001893;4.77e-37;34!UBERON:0000955;7.88e-28;68!UBERON:0001017;1.22e-23;75!UBERON:0000200;5.20e-22;6!UBERON:0001016;2.89e-18;83!UBERON:0002021;8.17e-18;5!UBERON:0004733;8.56e-18;12!UBERON:0002028;8.56e-18;12!UBERON:0004732;2.57e-16;13!UBERON:0002298;1.44e-14;6!UBERON:0002680;5.12e-14;9!UBERON:0001895;5.12e-14;9!UBERON:0003296;5.54e-14;4!UBERON:0010133;5.54e-14;4!UBERON:0007023;7.23e-13;114!UBERON:0001872;3.26e-12;5!UBERON:0001870;5.55e-12;3!UBERON:0001894;5.79e-12;7!UBERON:0000349;1.02e-11;5!UBERON:0000988;1.60e-11;3!UBERON:0001871;1.21e-08;6!UBERON:0002771;1.31e-08;2!UBERON:0002702;1.31e-08;2!UBERON:0001954;4.14e-08;2!UBERON:0003022;4.14e-08;2!UBERON:0002421;4.14e-08;2!UBERON:0002600;4.14e-08;2!UBERON:0011216;4.77e-08;132!UBERON:0001905;6.20e-08;2!UBERON:0002148;6.20e-08;2!UBERON:0002757;6.20e-08;2!UBERON:0010134;6.20e-08;2!UBERON:0006331;6.20e-08;2!UBERON:0009662;6.20e-08;2!UBERON:0005408;6.20e-08;2!UBERON:0001899;6.20e-08;2!UBERON:0000007;9.89e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.76e-73,53;UBERON:0002616,5.76e-73,53;UBERON:0001049,7.13e-73,56;UBERON:0005068,7.13e-73,56;UBERON:0006241,7.13e-73,56;UBERON:0007135,7.13e-73,56;UBERON:0000955,9.35e-65,68;UBERON:0006238,9.35e-65,68;UBERON:0001017,1.49e-59,81;UBERON:0002780,1.76e-55,41;UBERON:0001890,1.76e-55,41;UBERON:0003080,1.76e-55,41;UBERON:0006240,1.76e-55,41;UBERON:0003075,8.37e-53,82;UBERON:0007284,8.37e-53,82;UBERON:0001016,9.49e-53,89;UBERON:0002619,1.17e-52,22;UBERON:0002346,6.21e-50,86;UBERON:0003528,1.02e-48,34;UBERON:0002020,1.02e-48,34;UBERON:0001869,1.64e-47,32;UBERON:0001950,2.16e-46,20;UBERON:0000956,5.49e-46,25;UBERON:0000203,5.49e-46,25;UBERON:0001893,1.87e-44,34;UBERON:0002791,5.16e-43,32;UBERON:0010371,4.39e-42,104;UBERON:0003056,7.42e-41,61;UBERON:0007023,2.69e-38,114;UBERON:0010314,4.94e-37,132;UBERON:0004121,1.28e-27,171;UBERON:0000924,1.28e-27,171;UBERON:0006601,1.28e-27,171;UBERON:0000200,3.86e-22,6;UBERON:0011216,4.65e-20,223;UBERON:0000025,1.05e-19,192;UBERON:0004733,6.13e-18,12;UBERON:0002028,6.13e-18,12;UBERON:0007277,6.13e-18,12;UBERON:0002021,9.61e-18,5;UBERON:0003076,1.01e-17,15;UBERON:0003057,1.01e-17,15;UBERON:0004732,1.89e-16,13;UBERON:0002298,1.01e-14,6;UBERON:0003296,2.66e-14,4;UBERON:0010133,2.66e-14,4;UBERON:0002680,3.86e-14,9;UBERON:0001895,3.86e-14,9;UBERON:0010092,3.86e-14,9;UBERON:0004111,7.34e-14,240;UBERON:0000483,1.53e-13,306;UBERON:0000119,2.61e-13,309;UBERON:0001894,2.81e-12,7;UBERON:0006222,2.81e-12,7;UBERON:0001872,3.23e-12,5;UBERON:0001870,5.67e-12,3;UBERON:0000988,1.12e-11,3;UBERON:0000349,1.54e-11,5;UBERON:0002771,1.20e-08,2;UBERON:0002702,1.20e-08,2;UBERON:0001871,1.36e-08,6;UBERON:0002148,4.37e-08,2;UBERON:0006331,4.37e-08,2;UBERON:0009662,4.37e-08,2;UBERON:0001905,4.53e-08,2;UBERON:0002757,4.53e-08,2;UBERON:0010134,4.53e-08,2;UBERON:0005408,4.53e-08,2;UBERON:0001899,4.53e-08,2;UBERON:0001954,4.86e-08,2;UBERON:0003022,4.86e-08,2;UBERON:0002421,4.86e-08,2;UBERON:0002600,4.86e-08,2;UBERON:0000007,6.43e-08,2 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0,2.53299878168311,0,0.261185628199839,0,0,0,0,0.37129905888014,0.331397375727916,0,0,0,0,0.861847406537515,0.408001382488506,0.940364164434263,0.286235987131057,0.273748850145768,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0.580418477257168,0.56738522469114,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0.378139268656271,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.563057402416611,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0.302714855289863,0,0,0,1.1409436430889,0,0.23486899728753,0.323745888736263,0.140450806702248,0.204154171254893,0.122834317311768,0.206651562351531,0,0,0,0,0.505008341862199,0.375355559615893,0,0.877955241761676,0.919463387397059,0.300476117813194,0.226864366320042,1.07633781413317,0,0.211931901159562,0.900273288253207,0.412210116953756,0,0.558350568994769,1.0126579934476,0.194874010322397,0.252433774244115,0.184099797284599,0,0.710019185033229,0.503760491138201,0.339121184620975,0,0,0,0,0.132529768321485,0.116193942869518,0.518305275076852,0,0,0,0.643240938192885,1.38134921352481,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,1.03993478527958,0,0.34779121492523,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.2933531432838,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0.355391948742546,0,0,0,0,0,0,0,0.239624855491583,0,1.42636905040718,0.144781306667579,0,0.358121926479791,0,0,0,0,0.254094624222463,0,0,0.502548796003046,0,0,0,0,0.858840442033979,0,0,0,0.178428988797162,0,0,0.601892199455438,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0.511707249066704,0.160853921143607,0,0,0,0.164254312027618,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0.103041011647722,0,0.330037999682352,0,0,0,0.193341436584244,0.616194468458578,0.307007349452259,0.137836572484531,1.07420244868274,0.870100163485371,0.255679882248303,0.356128142586949,0,0,0,0,0.464845549297286,0,0,0,0.532306030317022,0,0,0,0.372158369359667,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.196498082026242,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0.994147647766298,3.09472716103128,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0.295930216910801,0,0,1.93866549219044,3.15411533750294,0,0,0,0.724999575434793,0,0,0,0,0,3.81974988853243,0,0.482385754501632,3.05163472634166,3.75969483766164,2.95547618953547,3.29078095730959,0,0,0,0.455768223388005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,0.296521128680622,0,0.104421949505455,0.404406797884062,0,1.63985112007737,0,0,0,0,0,0,0.126373159256976,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,1.35588444468319,0,0.397429223405979,3.16553979779394,0,0,0,0,0,0,0,0,0,0,0.407712618220842,0.523014231561666,0,1.44475294950759,1.20084057741958,0.821432273351958,0,0.429765441419957,0,0.837847203816763,0.229160424011684,0.717873024576814,0,0,0.446342914883745,1.00775208730089,0,0,0,0,0,0,0,5.56660782866512,1.0896272488926,0,0,0,0,0,3.28047605953333,0,0.0788057072991982,0.209818352539992,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0.681552087141687,0,0,1.32506888912221,3.61992277812342,1.45455861916959,0,0,0.213574825135389,0.943225830597996,0,0,0,0,0,0,0.2506898940227,0,0,0,3.54427271986794,3.66078794705889,5.38321002037949,0.573409195690071,1.22021956690538,2.91853093824502,0.553394539744923,0.249960815924213,0,0,0,0.468334905806882,0,0,0.233713309847224,0,0,0.251567901752575,0,0,0,0,0.147855149989634,0.159296767163702,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0.226705925512272,0.231522474323834,0,0,0,0,0.353378291891762,0,0.168942440653073,0,0,0.303859956177382,5.11556213761404,0.194860308839388,0,0,0,0,0,0,0,0,0,0.920529751259204,0,0,0.76736622782191,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,2.11956442818316,2.8339315265117,2.71377560397157,2.46139637088906,2.01657356977374,4.01112064292464,3.87541549516443,0,0,0,0,0,0,1.3807198521202,0,0.0752103283492573,1.21023041222112,0,0,0,0,3.24180406168294,3.12431239445539,5.37385670903079,4.05861185241004,0.546974809018219,0,0.496211178389294,0,0,1.60710550763486,3.36283722218824,1.82089681270989,2.73194629621557,0,0,0,10.3993691454553,2.95977481032821,0,0,0.156986185701028,0,0,0,0,0,1.21510125100316,0.158013611732727,0,0,0,0.828864656652147,0.51215543128185,0,0,0,0,0,0,1.24082554265728,0.955538938977433,0,0,0,0,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| ||
|short_description=p3@AMPH | |short_description=p3@AMPH | ||
}} | }} |
Latest revision as of 13:00, 18 September 2015
Short description: | p3@AMPH |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AMPH_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -27bp_to_ENST00000325590, ENST00000353242, ENST00000428293, ENST00000544070, uc003tgu.2, uc003tgv.2_5end |
EntrezGene: | AMPH |
HGNC: | 471 |
UniProt: | E7EMY9F5H533F5H6E8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data