FFCP PHASE1:Hg19::chr1:171810606..171810649,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:171810606..171810649,+ to FFCP PHASE1:Hg19::chr1:171810606..171810649,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26052 | |EntrezGene=26052 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29125 | |HGNC=29125 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UQ16,C9JXE5,Q6P2G1 | |UniProt=Q9UQ16,C9JXE5,Q6P2G1 | ||
|association_with_transcript=0bp_to_ENST00000355305,ENST00000358155,ENST00000359070,ENST00000367731,ENST00000367733,NM_001136127,NM_015569,uc001gid.3,uc001gie.2,uc001gif.2,uc009wwb.2_5end | |||
|cluster_id=chr1:171810606..171810649,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_DNM3_5end | |||
|id=chr1:171810606..171810649,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.71e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.53e-39!115;UBERON:0001017!7.11e-33!82;UBERON:0001049!1.67e-32!57;UBERON:0005068!1.67e-32!57;UBERON:0006241!1.67e-32!57;UBERON:0007135!1.67e-32!57;UBERON:0005743!1.46e-31!86;UBERON:0000073!9.17e-31!94;UBERON:0001016!9.17e-31!94;UBERON:0000955!8.13e-27!69;UBERON:0006238!8.13e-27!69;UBERON:0002616!8.91e-27!59;UBERON:0003080!1.37e-25!42;UBERON:0002780!2.86e-25!41;UBERON:0001890!2.86e-25!41;UBERON:0006240!2.86e-25!41;UBERON:0003075!2.37e-23!86;UBERON:0007284!2.37e-23!86;UBERON:0000153!1.79e-21!129;UBERON:0007811!1.79e-21!129;UBERON:0002346!1.87e-21!90;UBERON:0001893!3.97e-21!34;UBERON:0002020!4.45e-21!34;UBERON:0003528!4.45e-21!34;UBERON:0004121!7.46e-21!169;UBERON:0002791!1.99e-20!33;UBERON:0000033!1.99e-20!123;UBERON:0001869!6.22e-20!32;UBERON:0000924!9.28e-20!173;UBERON:0006601!9.28e-20!173;UBERON:0003056!9.71e-17!61;UBERON:0002619!8.48e-16!22;UBERON:0000956!1.53e-15!25;UBERON:0000203!1.53e-15!25;UBERON:0001950!1.40e-14!20;UBERON:0000062!2.04e-10!511;UBERON:0000480!2.35e-09!626;UBERON:0000467!4.47e-09!625;UBERON:0003076!4.61e-08!15;UBERON:0003057!4.61e-08!15;UBERON:0000064!1.39e-07!219;UBERON:0004732!5.05e-07!13;UBERON:0002308!5.22e-07!9;UBERON:0000125!5.22e-07!9;UBERON:0002420!5.47e-07!9;UBERON:0007245!5.47e-07!9;UBERON:0010009!5.47e-07!9;UBERON:0010011!5.47e-07!9;UBERON:0000454!5.47e-07!9;UBERON:0000468!6.27e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.50e-21;41!UBERON:0001890;2.50e-21;41!UBERON:0001893;2.78e-21;34!UBERON:0003528;3.18e-21;34!UBERON:0002020;3.18e-21;34!UBERON:0001869;3.25e-21;32!UBERON:0002791;4.23e-21;32!UBERON:0000073;1.76e-20;53!UBERON:0002616;1.76e-20;53!UBERON:0000956;3.04e-18;25!UBERON:0000203;3.04e-18;25!UBERON:0002619;3.12e-18;22!UBERON:0001950;8.32e-17;20!UBERON:0001017;2.27e-13;75!UBERON:0000955;2.55e-13;68!UBERON:0007023;4.83e-13;114!UBERON:0001016;1.06e-12;83!UBERON:0004732;3.57e-08;13!UBERON:0000125;6.05e-08;9!UBERON:0002308;6.05e-08;9!UBERON:0002420;6.41e-08;9!UBERON:0007245;6.41e-08;9!UBERON:0010009;6.41e-08;9!UBERON:0010011;6.41e-08;9!UBERON:0000454;6.41e-08;9!UBERON:0004733;1.80e-07;12!UBERON:0002028;1.80e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.70e-43,114;UBERON:0001049,3.76e-37,56;UBERON:0005068,3.76e-37,56;UBERON:0006241,3.76e-37,56;UBERON:0007135,3.76e-37,56;UBERON:0001017,2.83e-36,81;UBERON:0000073,4.49e-35,53;UBERON:0002616,4.49e-35,53;UBERON:0001016,1.75e-34,89;UBERON:0000955,2.81e-29,68;UBERON:0006238,2.81e-29,68;UBERON:0002780,3.97e-29,41;UBERON:0001890,3.97e-29,41;UBERON:0003080,3.97e-29,41;UBERON:0006240,3.97e-29,41;UBERON:0003075,1.20e-26,82;UBERON:0007284,1.20e-26,82;UBERON:0010371,5.25e-25,104;UBERON:0001893,2.62e-24,34;UBERON:0003528,3.00e-24,34;UBERON:0002020,3.00e-24,34;UBERON:0002346,7.39e-24,86;UBERON:0001869,6.44e-23,32;UBERON:0002791,8.92e-23,32;UBERON:0004121,1.16e-21,171;UBERON:0000924,1.16e-21,171;UBERON:0006601,1.16e-21,171;UBERON:0010314,5.87e-20,132;UBERON:0003056,3.70e-19,61;UBERON:0002619,4.16e-18,22;UBERON:0000956,8.29e-18,25;UBERON:0000203,8.29e-18,25;UBERON:0001950,1.08e-16,20;UBERON:0011216,2.28e-16,223;UBERON:0003076,4.05e-09,15;UBERON:0003057,4.05e-09,15;UBERON:0004732,6.51e-08,13;UBERON:0000125,6.76e-08,9;UBERON:0002308,6.76e-08,9;UBERON:0002420,7.14e-08,9;UBERON:0007245,7.14e-08,9;UBERON:0010009,7.14e-08,9;UBERON:0010011,7.14e-08,9;UBERON:0000454,7.14e-08,9;UBERON:0004733,3.22e-07,12;UBERON:0002028,3.22e-07,12;UBERON:0007277,3.22e-07,12 | |||
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| ||
|short_description=p1@DNM3 | |||
}} | }} |
Latest revision as of 15:51, 18 September 2015
Short description: | p1@DNM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DNM3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000355305, ENST00000358155, ENST00000359070, ENST00000367731, ENST00000367733, NM_001136127, NM_015569, uc001gid.3, uc001gie.2, uc001gif.2, uc009wwb.2_5end |
EntrezGene: | DNM3 |
HGNC: | 29125 |
UniProt: | Q9UQ16C9JXE5Q6P2G1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data