FFCP PHASE1:Hg19::chr4:75858318..75858339,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25849 | |EntrezGene=25849 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24536 | |HGNC=24536 | ||
|TSSclassifier=strong | |||
|UniProt=Q6UWI2 | |UniProt=Q6UWI2 | ||
|association_with_transcript=0bp_to_ENST00000307428_5end | |association_with_transcript=0bp_to_ENST00000307428_5end | ||
|cluster_id=chr4:75858318..75858339,+ | |||
|coexpression_cluster_id=C4424 | |coexpression_cluster_id=C4424 | ||
|description=CAGE_peak_1_at_PARM1_5end | |description=CAGE_peak_1_at_PARM1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000136;3.31e-07;13!CL:0000945;7.15e-07;24 | |ontology_enrichment_celltype_v019=CL:0000136;3.31e-07;13!CL:0000945;7.15e-07;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,6.88e-07,24;CL:0000826,6.88e-07,24 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.22e-08;82 | |ontology_enrichment_development_v019=UBERON:0006601;3.22e-08;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.82e-44!115;UBERON:0001049!1.15e-18!57;UBERON:0005068!1.15e-18!57;UBERON:0006241!1.15e-18!57;UBERON:0007135!1.15e-18!57;UBERON:0005743!1.63e-17!86;UBERON:0000073!4.79e-17!94;UBERON:0001016!4.79e-17!94;UBERON:0002346!1.82e-16!90;UBERON:0001017!3.38e-16!82;UBERON:0003080!6.15e-16!42;UBERON:0002616!1.89e-15!59;UBERON:0002780!2.19e-15!41;UBERON:0001890!2.19e-15!41;UBERON:0006240!2.19e-15!41;UBERON:0003075!3.84e-15!86;UBERON:0007284!3.84e-15!86;UBERON:0000955!4.19e-13!69;UBERON:0006238!4.19e-13!69;UBERON:0002020!2.53e-12!34;UBERON:0003528!2.53e-12!34;UBERON:0001893!2.75e-12!34;UBERON:0001869!4.65e-12!32;UBERON:0003056!7.38e-12!61;UBERON:0002791!8.18e-12!33;UBERON:0002619!2.65e-11!22;UBERON:0001950!9.40e-11!20;UBERON:0000468!2.21e-09!659;UBERON:0000924!2.22e-09!173;UBERON:0006601!2.22e-09!173;UBERON:0000922!2.22e-09!612;UBERON:0000956!2.27e-09!25;UBERON:0000203!2.27e-09!25;UBERON:0000481!1.74e-08!347;UBERON:0004121!1.78e-08!169;UBERON:0000153!2.52e-08!129;UBERON:0007811!2.52e-08!129;UBERON:0002050!3.98e-08!605;UBERON:0005423!3.98e-08!605;UBERON:0000033!6.83e-08!123;UBERON:0000923!7.61e-08!604;UBERON:0005291!7.61e-08!604;UBERON:0006598!7.61e-08!604;UBERON:0002532!7.61e-08!604;UBERON:0004111!2.07e-07!241;UBERON:0000025!3.70e-07!194 | |ontology_enrichment_uberon=UBERON:0007023!1.82e-44!115;UBERON:0001049!1.15e-18!57;UBERON:0005068!1.15e-18!57;UBERON:0006241!1.15e-18!57;UBERON:0007135!1.15e-18!57;UBERON:0005743!1.63e-17!86;UBERON:0000073!4.79e-17!94;UBERON:0001016!4.79e-17!94;UBERON:0002346!1.82e-16!90;UBERON:0001017!3.38e-16!82;UBERON:0003080!6.15e-16!42;UBERON:0002616!1.89e-15!59;UBERON:0002780!2.19e-15!41;UBERON:0001890!2.19e-15!41;UBERON:0006240!2.19e-15!41;UBERON:0003075!3.84e-15!86;UBERON:0007284!3.84e-15!86;UBERON:0000955!4.19e-13!69;UBERON:0006238!4.19e-13!69;UBERON:0002020!2.53e-12!34;UBERON:0003528!2.53e-12!34;UBERON:0001893!2.75e-12!34;UBERON:0001869!4.65e-12!32;UBERON:0003056!7.38e-12!61;UBERON:0002791!8.18e-12!33;UBERON:0002619!2.65e-11!22;UBERON:0001950!9.40e-11!20;UBERON:0000468!2.21e-09!659;UBERON:0000924!2.22e-09!173;UBERON:0006601!2.22e-09!173;UBERON:0000922!2.22e-09!612;UBERON:0000956!2.27e-09!25;UBERON:0000203!2.27e-09!25;UBERON:0000481!1.74e-08!347;UBERON:0004121!1.78e-08!169;UBERON:0000153!2.52e-08!129;UBERON:0007811!2.52e-08!129;UBERON:0002050!3.98e-08!605;UBERON:0005423!3.98e-08!605;UBERON:0000033!6.83e-08!123;UBERON:0000923!7.61e-08!604;UBERON:0005291!7.61e-08!604;UBERON:0006598!7.61e-08!604;UBERON:0002532!7.61e-08!604;UBERON:0004111!2.07e-07!241;UBERON:0000025!3.70e-07!194 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;2.05e-14;114!UBERON:0002619;4.69e-13;22!UBERON:0002780;1.09e-12;41!UBERON:0001890;1.09e-12;41!UBERON:0001950;2.11e-12;20!UBERON:0001869;3.16e-12;32!UBERON:0001893;5.79e-12;34!UBERON:0003528;6.40e-12;34!UBERON:0002020;6.40e-12;34!UBERON:0002791;7.27e-12;32!UBERON:0000073;4.21e-11;53!UBERON:0002616;4.21e-11;53!UBERON:0000956;2.08e-10;25!UBERON:0000203;2.08e-10;25!UBERON:0000922;2.94e-08;49!UBERON:0001017;2.31e-07;75!UBERON:0000955;4.97e-07;68 | |ontology_enrichment_uberon_v019=UBERON:0007023;2.05e-14;114!UBERON:0002619;4.69e-13;22!UBERON:0002780;1.09e-12;41!UBERON:0001890;1.09e-12;41!UBERON:0001950;2.11e-12;20!UBERON:0001869;3.16e-12;32!UBERON:0001893;5.79e-12;34!UBERON:0003528;6.40e-12;34!UBERON:0002020;6.40e-12;34!UBERON:0002791;7.27e-12;32!UBERON:0000073;4.21e-11;53!UBERON:0002616;4.21e-11;53!UBERON:0000956;2.08e-10;25!UBERON:0000203;2.08e-10;25!UBERON:0000922;2.94e-08;49!UBERON:0001017;2.31e-07;75!UBERON:0000955;4.97e-07;68 | ||
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|phase1_expression=52.868408367732,31.0445759641926,41.4405948042155,86.0630365836922,81.7938802801937,76.7657901208324,17.7309914717817,1.89515962028049,1.04474251279935,1.47440361900905,0.697801167972428,0.218441372130172,0.263766978228454,0,0.331397375727916,0.672325146451775,1.20538905604795,0,0,3.69363174230364,0.612002073732759,1.25381888591235,0.286235987131057,0.136874425072884,0,39.123663742951,46.4689336286693,48.4858412892264,0,0,0.619264493264304,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0.755751887377619,0.242584061187816,0.232429036905685,0,0,0,0.256160706529101,0.236482229888585,0.344745680736619,1.93645405075148,0,0.188242339542605,0.272906150057846,0.224723484445085,0.306083892370903,0.320929027076094,0,0,0.598390972864896,0,0,0.56738522469114,0,0,0,0,7.26479403160043,0,0,0,0.212604299965044,0,0.112328631146495,0,0.16072558669708,0.285012743741249,0.59675003159727,0,12.3197371122926,14.7457425040775,12.4531295540898,10.2415253415962,12.4122755981164,10.9202963591352,13.2208974556972,16.2189138271012,11.9534723512984,12.3319809767897,10.7036503875064,1.32171328579026,0,0,0.196709770113833,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0.301150238155546,0,0,0,0,0.403213486449465,0,0,2.43806866313962,0,0.383587685530591,0,0,1.01392563272577,2.3858578411533,0.486634870302636,7.09011128730509,1.10864698731282,2.89854792787316,55.142190784537,0.364295288292542,0,41.8666137814541,46.4926398589043,42.1476734844803,0.476981248610684,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0.33472061276467,0,0,0.732186172644509,0,0.81014194788176,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0.286836620748814,0.354668382198357,0.560677600142307,5.33744978648525,0,1.24484414159907,0,0.653847612453835,0.756787138224657,0,1.64025002283658,0.312160076830321,0,0,0.117434498643765,0,0,0,0.245668634623536,0.103325781175765,0,0.247266929278557,2.73048408581408,0,0.505008341862199,0.125118519871964,0,0,0,0.751190294532984,0,0,0.213557388818567,0,0,0,0,0.37223371266318,0.168776332241266,0,0,0.0920498986422993,0,0,0,0,0.57978255948989,0,1.14721838155602,2.07355300420312,1.98794652482228,3.48581828608555,9.22583389636797,4.03713361401005,0,3.12899064659632,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.5273141246454,5.88034845542168,0,0,3.54473944008842,0,0.245976877086227,3.25978839567199,0.109750285408626,0,0,0.0925884451585296,0,0,0,6.02838105870399,6.92711295991348,0,0,0,2.37061319387782,3.43394464837949,0,0.234004265139238,0,0,0.335964256397719,0,0,0,0,21.1845192295256,4.66656700270098,12.0250307013648,10.6648765528551,8.58448547299384,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0.07333828582095,12.0222695654733,39.3422090437071,0,0.26593811658487,0,0.257207374262142,0,0,3.86040582876998,221.389614999709,2.46972101034231,0,2.13235169245527,1.58390374586686,2.1100756394171,0.871533458600294,1.69954085009497,0,0,0,0,0,0,9.41078493339265,7.80810025691457,6.62525563987614,0,0,0,0,12.9588258353456,18.219579540067,13.1459098172208,1.34013012267479,9.56908127479745,0,0,0,0.613457458595699,1.00034104211935,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,1.44737618286021,0.862856803274467,0.74709290462411,0,1.66435439510497,0,4.46594054073798,20.7173663938884,6.73584226639377,6.02254001501795,45.0302379178699,28.7928518847057,65.303949235796,0.154209693802656,1.77561725313127,0.328508624055237,0,1.16210378459959,1.0877350463246,0.200506470303285,0.828728900423067,2.06666006696292,0,2.49136388422906,0.902399225814824,0.231046011313244,0,1.46139224653261,0.422206515571503,0,0,0,0,0,0,2.80363900349542,4.15538004464362,0,0,0,9.23220450419001,14.1046297650873,6.50756789328606,29.9849343894872,0,0.082509499920588,0.574265537996172,0,0,3.77015801339276,0,0.460511024178389,0.964856007391714,0.429680979473094,0.580066775656914,0.596586391912706,12.4644849905432,0,0.384380134730212,0.127612712494584,2.73126008309985,0,0.31481234683064,0,0.616067160352178,6.91997839412128,2.60979897622522,2.22389062924704,1.71749864090389,0,0.316379424718726,0.190630193923825,0,0,0,0.78494864019923,0.719489830333259,7.68703683260953,2.70968525395079,5.45892700247953,22.1914449642212,1.68503382495592,0,17.3036577638212,1.05650146756755,0,0.707027159768564,0,0.551365343546124,6.6343897524122,3.94605796728386,0,0.655894752046633,0.202910376962704,1.54911749049875,0.281695602532241,1.00387946542836,3.53696547647236,0,0,0.211107635297664,0,0,0,0,0,0,31.4440294594442,0,0,0.443430153536676,0.229723400206959,1.52234282769651,0.764637207142375,1.13929437434833,0.952927101831156,2.87953591160336,0,1.62009431171434,1.58625035258854,0,0,0,0,0,0,0.637705090915289,0,0,0,0,0,0,0,0,0,0,0,31.0867753513938,0,0.614481528616916,0.223676107892416,0.333698283423817,0,0,0,0,0,0,0.748562161632879,66.2216970308961,0,0,0.284136146806413,0.47748896947538,0,0,60.6430065137442,18.0056853005456,0,0.494411622680279,0.844501632511974,146.845767341038,107.474443141616,13.6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| ||
|short_description=p1@PARM1 | |short_description=p1@PARM1 | ||
}} | }} |
Latest revision as of 16:06, 18 September 2015
Short description: | p1@PARM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PARM1_5end |
Coexpression cluster: | C4424_somatostatinoma_pineal_neuroectodermal_retina_thyroid_Mesenchymal_left |
Association with transcript: | 0bp_to_ENST00000307428_5end |
EntrezGene: | PARM1 |
HGNC: | 24536 |
UniProt: | Q6UWI2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 6.88e-07 | 24 |
pro-B cell | 6.88e-07 | 24 |