FFCP PHASE1:Hg19::chr3:51741072..51741106,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2912 | |EntrezGene=2912 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4594 | |HGNC=4594 | ||
|TSSclassifier=strong | |||
|UniProt=Q14416,Q86YG3 | |UniProt=Q14416,Q86YG3 | ||
|association_with_transcript=0bp_to_ENST00000296479,ENST00000395052,ENST00000475478,NM_000839,NM_001130063,uc003dbo.3,uc010hlu.2,uc010hlv.2_5end | |association_with_transcript=0bp_to_ENST00000296479,ENST00000395052,ENST00000475478,NM_000839,NM_001130063,uc003dbo.3,uc010hlu.2,uc010hlv.2_5end | ||
|cluster_id=chr3:51741072..51741106,+ | |||
|coexpression_cluster_id=C837 | |coexpression_cluster_id=C837 | ||
|description=CAGE_peak_1_at_GRM2_5end | |description=CAGE_peak_1_at_GRM2_5end | ||
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|ontology_enrichment_celltype=CL:0000540!1.72e-07!6;CL:0000031!1.72e-07!6;CL:0000404!1.72e-07!6 | |ontology_enrichment_celltype=CL:0000540!1.72e-07!6;CL:0000031!1.72e-07!6;CL:0000404!1.72e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000540;6.17e-14;6!CL:0000404;6.17e-14;6!CL:0002322;7.49e-11;5!CL:0002321;1.88e-10;15!CL:0000333;1.52e-07;5 | |ontology_enrichment_celltype_v019=CL:0000540;6.17e-14;6!CL:0000404;6.17e-14;6!CL:0002322;7.49e-11;5!CL:0002321;1.88e-10;15!CL:0000333;1.52e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.10e-14,6;CL:0000031,6.10e-14,6;CL:0000404,6.10e-14,6;CL:0002322,8.94e-11,5;CL:0000047,2.94e-10,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.47e-15;82!CL:0000031;6.17e-14;6!UBERON:0006215;7.15e-08;3 | |ontology_enrichment_development_v019=UBERON:0006601;3.47e-15;82!CL:0000031;6.17e-14;6!UBERON:0006215;7.15e-08;3 | ||
|ontology_enrichment_disease=DOID:3095!2.35e-12!22;DOID:2994!2.35e-12!22;DOID:171!4.93e-09!10 | |ontology_enrichment_disease=DOID:3095!2.35e-12!22;DOID:2994!2.35e-12!22;DOID:171!4.93e-09!10 | ||
|ontology_enrichment_disease_v019=DOID:171;2.38e-14;10!DOID:3095;1.83e-10;22!DOID:2994;1.83e-10;22 | |ontology_enrichment_disease_v019=DOID:171;2.38e-14;10!DOID:3095;1.83e-10;22!DOID:2994;1.83e-10;22 | ||
|ontology_enrichment_disease_v019_2=DOID:171,2.16e-14,10;DOID:3095,1.64e-10,22;DOID:2994,1.64e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!3.63e-44!94;UBERON:0001016!3.63e-44!94;UBERON:0001017!9.60e-43!82;UBERON:0005743!1.17e-42!86;UBERON:0001049!4.56e-39!57;UBERON:0005068!4.56e-39!57;UBERON:0006241!4.56e-39!57;UBERON:0007135!4.56e-39!57;UBERON:0002346!5.75e-35!90;UBERON:0000955!1.49e-34!69;UBERON:0006238!1.49e-34!69;UBERON:0002616!2.66e-33!59;UBERON:0003075!3.72e-31!86;UBERON:0007284!3.72e-31!86;UBERON:0002780!5.26e-29!41;UBERON:0001890!5.26e-29!41;UBERON:0006240!5.26e-29!41;UBERON:0000924!4.51e-28!173;UBERON:0006601!4.51e-28!173;UBERON:0003080!5.49e-28!42;UBERON:0001893!4.45e-27!34;UBERON:0002020!7.34e-27!34;UBERON:0003528!7.34e-27!34;UBERON:0002791!5.43e-26!33;UBERON:0007023!1.20e-25!115;UBERON:0001869!1.48e-25!32;UBERON:0004121!4.29e-25!169;UBERON:0002619!2.40e-23!22;UBERON:0000033!5.07e-22!123;UBERON:0003056!1.03e-21!61;UBERON:0000153!1.50e-21!129;UBERON:0007811!1.50e-21!129;UBERON:0001950!2.31e-21!20;UBERON:0000956!1.36e-19!25;UBERON:0000203!1.36e-19!25;UBERON:0003076!5.08e-12!15;UBERON:0003057!5.08e-12!15;UBERON:0004733!1.02e-09!12;UBERON:0002028!1.02e-09!12;UBERON:0007277!1.02e-09!12;UBERON:0002420!4.70e-09!9;UBERON:0007245!4.70e-09!9;UBERON:0010009!4.70e-09!9;UBERON:0010011!4.70e-09!9;UBERON:0000454!4.70e-09!9;UBERON:0004732!1.03e-08!13;UBERON:0002308!1.03e-08!9;UBERON:0000125!1.03e-08!9;UBERON:0000200!9.77e-08!6;UBERON:0001871!1.37e-07!7;UBERON:0002680!2.70e-07!9;UBERON:0001895!2.70e-07!9;UBERON:0010092!2.70e-07!9;UBERON:0009663!4.45e-07!7;UBERON:0001872!5.33e-07!5;UBERON:0002021!5.46e-07!5;UBERON:0000025!5.73e-07!194 | |ontology_enrichment_uberon=UBERON:0000073!3.63e-44!94;UBERON:0001016!3.63e-44!94;UBERON:0001017!9.60e-43!82;UBERON:0005743!1.17e-42!86;UBERON:0001049!4.56e-39!57;UBERON:0005068!4.56e-39!57;UBERON:0006241!4.56e-39!57;UBERON:0007135!4.56e-39!57;UBERON:0002346!5.75e-35!90;UBERON:0000955!1.49e-34!69;UBERON:0006238!1.49e-34!69;UBERON:0002616!2.66e-33!59;UBERON:0003075!3.72e-31!86;UBERON:0007284!3.72e-31!86;UBERON:0002780!5.26e-29!41;UBERON:0001890!5.26e-29!41;UBERON:0006240!5.26e-29!41;UBERON:0000924!4.51e-28!173;UBERON:0006601!4.51e-28!173;UBERON:0003080!5.49e-28!42;UBERON:0001893!4.45e-27!34;UBERON:0002020!7.34e-27!34;UBERON:0003528!7.34e-27!34;UBERON:0002791!5.43e-26!33;UBERON:0007023!1.20e-25!115;UBERON:0001869!1.48e-25!32;UBERON:0004121!4.29e-25!169;UBERON:0002619!2.40e-23!22;UBERON:0000033!5.07e-22!123;UBERON:0003056!1.03e-21!61;UBERON:0000153!1.50e-21!129;UBERON:0007811!1.50e-21!129;UBERON:0001950!2.31e-21!20;UBERON:0000956!1.36e-19!25;UBERON:0000203!1.36e-19!25;UBERON:0003076!5.08e-12!15;UBERON:0003057!5.08e-12!15;UBERON:0004733!1.02e-09!12;UBERON:0002028!1.02e-09!12;UBERON:0007277!1.02e-09!12;UBERON:0002420!4.70e-09!9;UBERON:0007245!4.70e-09!9;UBERON:0010009!4.70e-09!9;UBERON:0010011!4.70e-09!9;UBERON:0000454!4.70e-09!9;UBERON:0004732!1.03e-08!13;UBERON:0002308!1.03e-08!9;UBERON:0000125!1.03e-08!9;UBERON:0000200!9.77e-08!6;UBERON:0001871!1.37e-07!7;UBERON:0002680!2.70e-07!9;UBERON:0001895!2.70e-07!9;UBERON:0010092!2.70e-07!9;UBERON:0009663!4.45e-07!7;UBERON:0001872!5.33e-07!5;UBERON:0002021!5.46e-07!5;UBERON:0000025!5.73e-07!194 | ||
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| ||
|short_description=p1@GRM2 | |short_description=p1@GRM2 | ||
}} | }} |
Latest revision as of 21:25, 18 September 2015
Short description: | p1@GRM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GRM2_5end |
Coexpression cluster: | C837_neuroectodermal_duodenum_temporal_occipital_medial_carcinoid_parietal |
Association with transcript: | 0bp_to_ENST00000296479, ENST00000395052, ENST00000475478, NM_000839, NM_001130063, uc003dbo.3, uc010hlu.2, uc010hlv.2_5end |
EntrezGene: | GRM2 |
HGNC: | 4594 |
UniProt: | Q14416Q86YG3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.10e-14 | 6 |
neuroblast | 6.10e-14 | 6 |
electrically signaling cell | 6.10e-14 | 6 |
embryonic stem cell | 8.94e-11 | 5 |
neuronal stem cell | 2.94e-10 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.16e-14 | 10 |
germ cell and embryonal cancer | 1.64e-10 | 22 |
germ cell cancer | 1.64e-10 | 22 |