FFCP PHASE1:Hg19::chrX:110655391..110655449,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1641 | |EntrezGene=1641 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2714 | |HGNC=2714 | ||
|TSSclassifier=strong | |||
|UniProt=O43602 | |UniProt=O43602 | ||
|association_with_transcript=0bp_to_ENST00000356220,ENST00000356915,ENST00000496551,NM_178151,uc004epf.2,uc004epg.2_5end | |association_with_transcript=0bp_to_ENST00000356220,ENST00000356915,ENST00000496551,NM_178151,uc004epf.2,uc004epg.2_5end | ||
|cluster_id=chrX:110655391..110655449,- | |||
|coexpression_cluster_id=C10 | |coexpression_cluster_id=C10 | ||
|description=CAGE_peak_1_at_DCX_5end | |description=CAGE_peak_1_at_DCX_5end | ||
|id=chrX:110655391..110655449,- | |id=chrX:110655391..110655449,- | ||
|ontology_enrichment_celltype=CL:0000047!1.20e-10!8;CL:0000540!5.21e-08!6;CL:0000031!5.21e-08!6;CL:0000404!5.21e-08!6;CL:0000133!7.37e-08!59;CL:0002319!2.17e-07!25 | |ontology_enrichment_celltype=CL:0000047!1.20e-10!8;CL:0000540!5.21e-08!6;CL:0000031!5.21e-08!6;CL:0000404!5.21e-08!6;CL:0000133!7.37e-08!59;CL:0002319!2.17e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000540;1.90e-10;6!CL:0000404;1.90e-10;6!CL:0002319;1.64e-08;25!CL:0002322;3.24e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,4.35e-14,8;CL:0000540,1.87e-10,6;CL:0000031,1.87e-10,6;CL:0000404,1.87e-10,6;CL:0002319,1.69e-08,25;CL:0002322,2.58e-08,5;CL:0000133,8.01e-08,59 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.05e-13;82!CL:0000031;1.90e-10;6 | |||
|ontology_enrichment_disease=DOID:171!4.72e-12!10;DOID:169!5.21e-08!6;DOID:3095!8.08e-07!22;DOID:2994!8.08e-07!22 | |ontology_enrichment_disease=DOID:171!4.72e-12!10;DOID:169!5.21e-08!6;DOID:3095!8.08e-07!22;DOID:2994!8.08e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:171;5.09e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,5.00e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!5.80e-56!94;UBERON:0001016!5.80e-56!94;UBERON:0001017!1.38e-52!82;UBERON:0005743!3.13e-52!86;UBERON:0001049!3.80e-49!57;UBERON:0005068!3.80e-49!57;UBERON:0006241!3.80e-49!57;UBERON:0007135!3.80e-49!57;UBERON:0002780!1.41e-40!41;UBERON:0001890!1.41e-40!41;UBERON:0006240!1.41e-40!41;UBERON:0002616!1.90e-40!59;UBERON:0002346!4.95e-40!90;UBERON:0003080!2.81e-39!42;UBERON:0001893!4.33e-39!34;UBERON:0002020!4.38e-39!34;UBERON:0003528!4.38e-39!34;UBERON:0000955!9.55e-39!69;UBERON:0006238!9.55e-39!69;UBERON:0002791!6.27e-38!33;UBERON:0000924!7.03e-38!173;UBERON:0006601!7.03e-38!173;UBERON:0001869!1.88e-37!32;UBERON:0003075!3.56e-36!86;UBERON:0007284!3.56e-36!86;UBERON:0004121!1.43e-34!169;UBERON:0007023!2.04e-33!115;UBERON:0000956!6.73e-30!25;UBERON:0000203!6.73e-30!25;UBERON:0003056!5.23e-29!61;UBERON:0002619!9.04e-28!22;UBERON:0000153!6.38e-26!129;UBERON:0007811!6.38e-26!129;UBERON:0001950!8.50e-26!20;UBERON:0000033!2.85e-24!123;UBERON:0000922!4.52e-11!612;UBERON:0003076!7.30e-11!15;UBERON:0003057!7.30e-11!15;UBERON:0002420!7.37e-11!9;UBERON:0007245!7.37e-11!9;UBERON:0010009!7.37e-11!9;UBERON:0010011!7.37e-11!9;UBERON:0000454!7.37e-11!9;UBERON:0001871!1.43e-10!7;UBERON:0002308!1.62e-10!9;UBERON:0000125!1.62e-10!9;UBERON:0000064!7.22e-10!219;UBERON:0004732!9.38e-09!13;UBERON:0000025!1.05e-08!194;UBERON:0009663!1.34e-08!7;UBERON:0000200!1.96e-08!6;UBERON:0002050!3.51e-08!605;UBERON:0005423!3.51e-08!605;UBERON:0004733!6.51e-08!12;UBERON:0002028!6.51e-08!12;UBERON:0007277!6.51e-08!12;UBERON:0000923!7.72e-08!604;UBERON:0005291!7.72e-08!604;UBERON:0006598!7.72e-08!604;UBERON:0002532!7.72e-08!604;UBERON:0000468!8.56e-08!659;UBERON:0001872!2.02e-07!5;UBERON:0002021!2.42e-07!5;UBERON:0000349!5.49e-07!5;UBERON:0002298!7.44e-07!8;UBERON:0004111!7.78e-07!241;UBERON:0000013!9.51e-07!5;UBERON:0002410!9.51e-07!5 | |ontology_enrichment_uberon=UBERON:0000073!5.80e-56!94;UBERON:0001016!5.80e-56!94;UBERON:0001017!1.38e-52!82;UBERON:0005743!3.13e-52!86;UBERON:0001049!3.80e-49!57;UBERON:0005068!3.80e-49!57;UBERON:0006241!3.80e-49!57;UBERON:0007135!3.80e-49!57;UBERON:0002780!1.41e-40!41;UBERON:0001890!1.41e-40!41;UBERON:0006240!1.41e-40!41;UBERON:0002616!1.90e-40!59;UBERON:0002346!4.95e-40!90;UBERON:0003080!2.81e-39!42;UBERON:0001893!4.33e-39!34;UBERON:0002020!4.38e-39!34;UBERON:0003528!4.38e-39!34;UBERON:0000955!9.55e-39!69;UBERON:0006238!9.55e-39!69;UBERON:0002791!6.27e-38!33;UBERON:0000924!7.03e-38!173;UBERON:0006601!7.03e-38!173;UBERON:0001869!1.88e-37!32;UBERON:0003075!3.56e-36!86;UBERON:0007284!3.56e-36!86;UBERON:0004121!1.43e-34!169;UBERON:0007023!2.04e-33!115;UBERON:0000956!6.73e-30!25;UBERON:0000203!6.73e-30!25;UBERON:0003056!5.23e-29!61;UBERON:0002619!9.04e-28!22;UBERON:0000153!6.38e-26!129;UBERON:0007811!6.38e-26!129;UBERON:0001950!8.50e-26!20;UBERON:0000033!2.85e-24!123;UBERON:0000922!4.52e-11!612;UBERON:0003076!7.30e-11!15;UBERON:0003057!7.30e-11!15;UBERON:0002420!7.37e-11!9;UBERON:0007245!7.37e-11!9;UBERON:0010009!7.37e-11!9;UBERON:0010011!7.37e-11!9;UBERON:0000454!7.37e-11!9;UBERON:0001871!1.43e-10!7;UBERON:0002308!1.62e-10!9;UBERON:0000125!1.62e-10!9;UBERON:0000064!7.22e-10!219;UBERON:0004732!9.38e-09!13;UBERON:0000025!1.05e-08!194;UBERON:0009663!1.34e-08!7;UBERON:0000200!1.96e-08!6;UBERON:0002050!3.51e-08!605;UBERON:0005423!3.51e-08!605;UBERON:0004733!6.51e-08!12;UBERON:0002028!6.51e-08!12;UBERON:0007277!6.51e-08!12;UBERON:0000923!7.72e-08!604;UBERON:0005291!7.72e-08!604;UBERON:0006598!7.72e-08!604;UBERON:0002532!7.72e-08!604;UBERON:0000468!8.56e-08!659;UBERON:0001872!2.02e-07!5;UBERON:0002021!2.42e-07!5;UBERON:0000349!5.49e-07!5;UBERON:0002298!7.44e-07!8;UBERON:0004111!7.78e-07!241;UBERON:0000013!9.51e-07!5;UBERON:0002410!9.51e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;5.85e-44;32!UBERON:0003528;9.41e-44;34!UBERON:0002020;9.41e-44;34!UBERON:0002791;1.36e-43;32!UBERON:0001893;1.52e-43;34!UBERON:0000956;3.44e-38;25!UBERON:0000203;3.44e-38;25!UBERON:0002619;1.17e-37;22!UBERON:0002780;5.84e-36;41!UBERON:0001890;5.84e-36;41!UBERON:0001950;5.67e-35;20!UBERON:0000073;1.24e-30;53!UBERON:0002616;1.24e-30;53!UBERON:0001017;2.37e-23;75!UBERON:0000955;1.53e-22;68!UBERON:0001016;1.06e-21;83!UBERON:0000922;1.14e-16;49!UBERON:0002420;2.19e-14;9!UBERON:0007245;2.19e-14;9!UBERON:0010009;2.19e-14;9!UBERON:0010011;2.19e-14;9!UBERON:0000454;2.19e-14;9!UBERON:0000125;5.35e-14;9!UBERON:0002308;5.35e-14;9!UBERON:0001871;2.12e-12;6!UBERON:0009663;2.64e-11;7!UBERON:0000200;5.83e-11;6!UBERON:0001872;1.23e-09;5!UBERON:0002021;1.49e-09;5!UBERON:0002298;1.80e-09;6!UBERON:0000349;5.42e-09;5!UBERON:0011216;7.01e-09;132!UBERON:0004732;2.65e-08;13!UBERON:0007023;3.53e-08;114!UBERON:0000369;8.67e-08;4!UBERON:0002435;8.67e-08;4!UBERON:0000204;8.67e-08;4!UBERON:0004733;2.92e-07;12!UBERON:0002028;2.92e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.05e-65,89;UBERON:0001017,7.19e-64,81;UBERON:0001049,4.69e-58,56;UBERON:0005068,4.69e-58,56;UBERON:0006241,4.69e-58,56;UBERON:0007135,4.69e-58,56;UBERON:0000073,1.48e-53,53;UBERON:0002616,1.48e-53,53;UBERON:0001893,6.19e-51,34;UBERON:0003528,6.30e-51,34;UBERON:0002020,6.30e-51,34;UBERON:0001869,1.18e-48,32;UBERON:0002780,1.69e-48,41;UBERON:0001890,1.69e-48,41;UBERON:0003080,1.69e-48,41;UBERON:0006240,1.69e-48,41;UBERON:0002791,3.69e-48,32;UBERON:0000955,4.27e-47,68;UBERON:0006238,4.27e-47,68;UBERON:0002346,3.75e-40,86;UBERON:0000956,3.26e-38,25;UBERON:0000203,3.26e-38,25;UBERON:0002619,9.52e-38,22;UBERON:0004121,7.78e-37,171;UBERON:0000924,7.78e-37,171;UBERON:0006601,7.78e-37,171;UBERON:0003075,8.73e-37,82;UBERON:0007284,8.73e-37,82;UBERON:0001950,5.11e-35,20;UBERON:0003056,9.76e-31,61;UBERON:0010371,1.62e-30,104;UBERON:0011216,6.37e-25,223;UBERON:0007023,3.18e-22,114;UBERON:0010314,1.40e-20,132;UBERON:0002420,2.23e-14,9;UBERON:0007245,2.23e-14,9;UBERON:0010009,2.23e-14,9;UBERON:0010011,2.23e-14,9;UBERON:0000454,2.23e-14,9;UBERON:0000125,6.59e-14,9;UBERON:0002308,6.59e-14,9;UBERON:0001871,1.95e-12,6;UBERON:0009663,2.89e-11,7;UBERON:0000200,4.89e-11,6;UBERON:0003076,6.08e-11,15;UBERON:0003057,6.08e-11,15;UBERON:0000025,9.96e-10,192;UBERON:0001872,1.20e-09,5;UBERON:0002021,1.55e-09,5;UBERON:0002298,1.97e-09,6;UBERON:0000349,4.76e-09,5;UBERON:0000922,1.34e-08,592;UBERON:0004732,2.82e-08,13;UBERON:0000369,9.23e-08,4;UBERON:0002435,9.23e-08,4;UBERON:0000204,9.23e-08,4;UBERON:0010082,9.23e-08,4;UBERON:0004733,3.24e-07,12;UBERON:0002028,3.24e-07,12;UBERON:0007277,3.24e-07,12 | |||
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| ||
|short_description=p1@DCX | |short_description=p1@DCX | ||
}} | }} |
Latest revision as of 01:47, 19 September 2015
Short description: | p1@DCX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DCX_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000356220, ENST00000356915, ENST00000496551, NM_178151, uc004epf.2, uc004epg.2_5end |
EntrezGene: | DCX |
HGNC: | 2714 |
UniProt: | O43602 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 4.35e-14 | 8 |
neuron | 1.87e-10 | 6 |
neuroblast | 1.87e-10 | 6 |
electrically signaling cell | 1.87e-10 | 6 |
neural cell | 1.69e-08 | 25 |
embryonic stem cell | 2.58e-08 | 5 |
neurectodermal cell | 8.01e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 5.00e-09 | 10 |