FFCP PHASE1:Hg19::chr1:183219137..183219155,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23057 | |EntrezGene=23057 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=16789 | |HGNC=16789 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=468bp_to_BC016726_5end | |association_with_transcript=468bp_to_BC016726_5end | ||
|cluster_id=chr1:183219137..183219155,- | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_11_at_NMNAT2_5end | |description=CAGE_peak_11_at_NMNAT2_5end | ||
|id=chr1:183219137..183219155,- | |id=chr1:183219137..183219155,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002591;2.05e-29;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,1.78e-29,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.54e-44!57;UBERON:0005068!9.54e-44!57;UBERON:0006241!9.54e-44!57;UBERON:0007135!9.54e-44!57;UBERON:0002616!1.91e-39!59;UBERON:0001017!1.81e-38!82;UBERON:0000955!3.86e-38!69;UBERON:0006238!3.86e-38!69;UBERON:0000073!1.77e-37!94;UBERON:0001016!1.77e-37!94;UBERON:0002780!2.71e-37!41;UBERON:0001890!2.71e-37!41;UBERON:0006240!2.71e-37!41;UBERON:0003080!3.15e-36!42;UBERON:0005743!3.65e-36!86;UBERON:0003075!6.28e-33!86;UBERON:0007284!6.28e-33!86;UBERON:0001893!6.67e-33!34;UBERON:0002020!7.20e-33!34;UBERON:0003528!7.20e-33!34;UBERON:0001869!1.94e-32!32;UBERON:0002346!5.71e-31!90;UBERON:0002791!6.53e-31!33;UBERON:0002619!1.69e-28!22;UBERON:0001950!4.30e-28!20;UBERON:0007023!8.48e-28!115;UBERON:0000956!1.27e-24!25;UBERON:0000203!1.27e-24!25;UBERON:0003056!2.45e-24!61;UBERON:0000033!4.21e-22!123;UBERON:0000153!1.48e-20!129;UBERON:0007811!1.48e-20!129;UBERON:0004121!5.90e-20!169;UBERON:0000924!3.33e-19!173;UBERON:0006601!3.33e-19!173;UBERON:0000200!6.94e-16!6;UBERON:0000025!2.57e-13!194;UBERON:0001872!3.54e-13!5;UBERON:0001871!1.33e-11!7;UBERON:0000369!5.44e-11!4;UBERON:0002435!5.44e-11!4;UBERON:0000204!5.44e-11!4;UBERON:0010082!5.44e-11!4;UBERON:0002420!3.69e-10!9;UBERON:0007245!3.69e-10!9;UBERON:0010009!3.69e-10!9;UBERON:0010011!3.69e-10!9;UBERON:0000454!3.69e-10!9;UBERON:0004111!9.37e-10!241;UBERON:0002308!1.28e-09!9;UBERON:0000125!1.28e-09!9;UBERON:0000483!3.38e-09!309;UBERON:0000119!5.52e-09!312;UBERON:0002771!5.94e-09!3;UBERON:0004733!7.05e-09!12;UBERON:0002028!7.05e-09!12;UBERON:0007277!7.05e-09!12;UBERON:0003076!7.82e-09!15;UBERON:0003057!7.82e-09!15;UBERON:0005383!8.67e-09!3;UBERON:0005382!8.67e-09!3;UBERON:0000477!1.28e-08!286;UBERON:0000349!1.87e-08!5;UBERON:0004732!4.17e-08!13;UBERON:0000988!1.17e-07!3;UBERON:0000481!2.76e-07!347;UBERON:0002298!4.80e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002771;2.32e-57;2!UBERON:0001871;5.56e-37;6!UBERON:0001950;7.08e-34;20!UBERON:0002619;5.57e-31;22!UBERON:0001874;2.05e-29;1!UBERON:0003528;1.68e-28;34!UBERON:0002020;1.68e-28;34!UBERON:0000956;1.81e-27;25!UBERON:0000203;1.81e-27;25!UBERON:0001893;2.66e-27;34!UBERON:0002791;4.32e-26;32!UBERON:0001869;1.94e-24;32!UBERON:0001872;1.61e-23;5!UBERON:0000200;6.17e-20;6!UBERON:0001876;1.91e-15;2!UBERON:0000078;1.91e-15;2!UBERON:0002012;1.91e-15;2!UBERON:0008886;1.91e-15;2!UBERON:0000073;4.71e-14;53!UBERON:0002616;4.71e-14;53!UBERON:0002420;1.49e-13;9!UBERON:0007245;1.49e-13;9!UBERON:0010009;1.49e-13;9!UBERON:0010011;1.49e-13;9!UBERON:0000454;1.49e-13;9!UBERON:0000955;5.31e-13;68!UBERON:0002780;2.60e-12;41!UBERON:0001890;2.60e-12;41!UBERON:0005383;9.43e-11;3!UBERON:0005382;9.43e-11;3!UBERON:0001017;4.88e-10;75!UBERON:0000369;2.18e-08;4!UBERON:0002435;2.18e-08;4!UBERON:0000204;2.18e-08;4!UBERON:0001016;1.69e-07;83!UBERON:0000349;5.86e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002771,1.51e-57,2;UBERON:0001871,3.40e-37,6;UBERON:0001950,7.09e-34,20;UBERON:0002619,5.57e-31,22;UBERON:0002791,5.71e-31,32;UBERON:0001869,5.71e-31,32;UBERON:0001874,2.37e-29,1;UBERON:0003528,3.16e-29,34;UBERON:0002020,3.16e-29,34;UBERON:0001893,3.16e-29,34;UBERON:0000956,1.81e-27,25;UBERON:0000203,1.81e-27,25;UBERON:0002780,1.99e-24,41;UBERON:0001890,1.99e-24,41;UBERON:0003080,1.99e-24,41;UBERON:0006240,1.99e-24,41;UBERON:0001872,2.54e-23,5;UBERON:0000200,5.35e-20,6;UBERON:0000073,4.39e-19,53;UBERON:0002616,4.39e-19,53;UBERON:0001049,4.26e-18,56;UBERON:0005068,4.26e-18,56;UBERON:0006241,4.26e-18,56;UBERON:0007135,4.26e-18,56;UBERON:0003075,6.63e-17,82;UBERON:0007284,6.63e-17,82;UBERON:0003056,1.15e-16,61;UBERON:0002346,3.85e-16,86;UBERON:0001876,1.33e-15,2;UBERON:0000078,1.78e-15,2;UBERON:0007497,1.78e-15,2;UBERON:0003643,1.78e-15,2;UBERON:0003504,1.78e-15,2;UBERON:0003469,1.78e-15,2;UBERON:0003496,1.78e-15,2;UBERON:0002012,1.78e-15,2;UBERON:0008886,1.78e-15,2;UBERON:0007303,1.78e-15,2;UBERON:0002061,1.78e-15,2;UBERON:0005432,1.78e-15,2;UBERON:0004363,1.78e-15,2;UBERON:0000955,8.54e-15,68;UBERON:0006238,8.54e-15,68;UBERON:0002420,1.31e-13,9;UBERON:0007245,1.31e-13,9;UBERON:0010009,1.31e-13,9;UBERON:0010011,1.31e-13,9;UBERON:0000454,1.31e-13,9;UBERON:0010371,2.04e-13,104;UBERON:0001017,1.61e-12,81;UBERON:0001016,2.56e-11,89;UBERON:0004145,8.99e-11,3;UBERON:0005383,9.90e-11,3;UBERON:0005382,9.90e-11,3;UBERON:0010314,1.24e-10,132;UBERON:0000369,2.26e-08,4;UBERON:0002435,2.26e-08,4;UBERON:0000204,2.26e-08,4;UBERON:0010082,2.26e-08,4;UBERON:0004121,3.72e-08,171;UBERON:0000924,3.72e-08,171;UBERON:0006601,3.72e-08,171;UBERON:0000025,2.32e-07,192;UBERON:0000349,5.08e-07,5;UBERON:0003498,5.70e-07,5;UBERON:0005985,5.70e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670065061337395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0.214840489736547,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,1.9882952955326,0.703347082052564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556608588971108,0,0,0,0,0.1137934482855,0,0,0,0,0.173624994933292,0.885741385813839,0.723578631752448,0,0.884634079449797,0.591095237907095,0.219385397153973,0,0,0,0,0,0.269272933229316,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.823040347426423,0,0.0801588202515337,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0.137539436597234,0,0,0,0.303747783290123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,4.88105059607853,0.876336514945499,0,0.221858103073705,0.248385611765534,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0.414706207840855,0,0,0,0.380805212168795,0,0,0.107410557042488,0,0,0,0.343395705182793,0,0,0,0,0,0,0.231522474323834,0,0.71635536432595,0,0.219284049578707,0,0.192914038270915,0,0,0,0,1.24432592536558,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.970423302570136,0,0.436838552768056,0,0,0,0,0,0,0,0,0,0.578063025868136,0,0.638535436228605,0,0,0.345786262321089,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.675375846183947,0.781078098613847,1.03343398250592,0.317079050969534,1.09394961803644,0,0.496211178389294,0,0,0,0.672567444437648,0.606965604236632,0.455324382702595,0,0,0,0.339848664884159,0.72350050919134,0,0.222462803784138,0,1.09980912941201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329821550236287,0,0,0.218559560503957,0,0,0.471353094203252,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407948941145488,0,0,0,0,0,0,0,0,0.203977659483963,0,0.0918948995348449,0,0,0.267964130156178,0,0.310298987585686,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670065061337395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0.214840489736547,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,1.9882952955326,0.703347082052564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556608588971108,0,0,0,0,0.1137934482855,0,0,0,0,0.173624994933292,0.885741385813839,0.723578631752448,0,0.884634079449797,0.591095237907095,0.219385397153973,0,0,0,0,0,0.269272933229316,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.823040347426423,0,0.0801588202515337,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0.137539436597234,0,0,0,0.303747783290123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,4.88105059607853,0.876336514945499,0,0.221858103073705,0.248385611765534,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0.414706207840855,0,0,0,0.380805212168795,0,0,0.107410557042488,0,0,0,0.343395705182793,0,0,0,0,0,0,0.231522474323834,0,0.71635536432595,0,0.219284049578707,0,0.192914038270915,0,0,0,0,1.24432592536558,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.970423302570136,0,0.436838552768056,0,0,0,0,0,0,0,0,0,0.578063025868136,0,0.638535436228605,0,0,0.345786262321089,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.675375846183947,0.781078098613847,1.03343398250592,0.317079050969534,1.09394961803644,0,0.496211178389294,0,0,0,0.672567444437648,0.606965604236632,0.455324382702595,0,0,0,0.339848664884159,0.72350050919134,0,0.222462803784138,0,1.09980912941201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329821550236287,0,0,0.218559560503957,0,0,0.471353094203252,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407948941145488,0,0,0,0,0,0,0,0,0.203977659483963,0,0.0918948995348449,0,0,0.267964130156178,0,0.310298987585686,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p11@NMNAT2 | |short_description=p11@NMNAT2 | ||
}} | }} |
Latest revision as of 02:55, 19 September 2015
Short description: | p11@NMNAT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_NMNAT2_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | 468bp_to_BC016726_5end |
EntrezGene: | NMNAT2 |
HGNC: | 16789 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 1.78e-29 | 1 |