FFCP PHASE1:Hg19::chrX:128657363..128657372,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:128657363..128657372,-
|short_description=p3@SMARCA1
|description=CAGE_peak_3_at_SMARCA1_5end
|association_with_transcript=47bp_to_ENST00000450039_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6594 | |EntrezGene=6594 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11097 | |HGNC=11097 | ||
|TSSclassifier=strong | |||
|UniProt=F6TQG2 | |UniProt=F6TQG2 | ||
|association_with_transcript=47bp_to_ENST00000450039_5end | |||
|cluster_id=chrX:128657363..128657372,- | |||
|description=CAGE_peak_3_at_SMARCA1_5end | |||
|id=chrX:128657363..128657372,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.90e-12;3!UBERON:0007297;6.81e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.07e-20!57;UBERON:0005068!1.07e-20!57;UBERON:0006241!1.07e-20!57;UBERON:0007135!1.07e-20!57;UBERON:0000955!1.18e-20!69;UBERON:0006238!1.18e-20!69;UBERON:0002780!8.88e-20!41;UBERON:0001890!8.88e-20!41;UBERON:0006240!8.88e-20!41;UBERON:0001017!2.34e-19!82;UBERON:0003080!6.94e-19!42;UBERON:0007023!7.10e-19!115;UBERON:0002616!1.08e-18!59;UBERON:0002020!2.61e-18!34;UBERON:0003528!2.61e-18!34;UBERON:0001893!4.10e-18!34;UBERON:0005743!6.80e-18!86;UBERON:0001869!7.94e-18!32;UBERON:0002791!1.44e-17!33;UBERON:0000073!5.41e-17!94;UBERON:0001016!5.41e-17!94;UBERON:0003075!8.52e-17!86;UBERON:0007284!8.52e-17!86;UBERON:0002346!8.72e-17!90;UBERON:0002619!1.06e-13!22;UBERON:0000956!1.62e-13!25;UBERON:0000203!1.62e-13!25;UBERON:0000481!4.93e-13!347;UBERON:0000924!8.43e-13!173;UBERON:0006601!8.43e-13!173;UBERON:0004121!1.31e-12!169;UBERON:0000033!2.10e-12!123;UBERON:0001950!3.34e-12!20;UBERON:0000475!3.48e-12!365;UBERON:0003056!3.61e-12!61;UBERON:0000153!9.52e-12!129;UBERON:0007811!9.52e-12!129;UBERON:0000062!1.36e-11!511;UBERON:0000477!5.84e-10!286;UBERON:0000025!7.32e-10!194;UBERON:0000064!1.84e-09!219;UBERON:0000468!3.13e-09!659;UBERON:0000119!5.23e-09!312;UBERON:0000483!1.06e-08!309;UBERON:0004111!1.89e-08!241;UBERON:0000467!3.42e-08!625;UBERON:0000480!4.62e-08!626;UBERON:0000922!7.45e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.14e-39;22!UBERON:0000956;1.24e-34;25!UBERON:0000203;1.24e-34;25!UBERON:0001950;3.24e-33;20!UBERON:0003528;3.49e-30;34!UBERON:0002020;3.49e-30;34!UBERON:0002791;7.27e-30;32!UBERON:0001869;3.65e-29;32!UBERON:0001893;2.75e-27;34!UBERON:0002780;2.56e-22;41!UBERON:0001890;2.56e-22;41!UBERON:0000073;3.35e-22;53!UBERON:0002616;3.35e-22;53!UBERON:0000955;3.94e-14;68!UBERON:0002021;5.82e-13;5!UBERON:0001872;1.09e-12;5!UBERON:0001017;4.18e-12;75!UBERON:0001016;4.67e-12;83!UBERON:0002680;1.49e-10;9!UBERON:0001895;1.49e-10;9!UBERON:0002771;6.81e-09;2!UBERON:0001954;6.81e-09;2!UBERON:0003022;6.81e-09;2!UBERON:0002421;6.81e-09;2!UBERON:0002600;6.81e-09;2!UBERON:0007023;1.37e-08;114!UBERON:0004733;7.77e-08;12!UBERON:0002028;7.77e-08;12!UBERON:0000349;1.52e-07;5!UBERON:0004732;3.30e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.03e-39,22;UBERON:0000073,8.63e-39,53;UBERON:0002616,8.63e-39,53;UBERON:0001049,2.06e-36,56;UBERON:0005068,2.06e-36,56;UBERON:0006241,2.06e-36,56;UBERON:0007135,2.06e-36,56;UBERON:0003528,3.26e-35,34;UBERON:0002020,3.26e-35,34;UBERON:0000956,2.05e-34,25;UBERON:0000203,2.05e-34,25;UBERON:0002791,1.63e-33,32;UBERON:0001869,1.63e-33,32;UBERON:0001950,5.63e-33,20;UBERON:0002780,5.00e-32,41;UBERON:0001890,5.00e-32,41;UBERON:0003080,5.00e-32,41;UBERON:0006240,5.00e-32,41;UBERON:0001893,2.43e-31,34;UBERON:0000955,4.35e-31,68;UBERON:0006238,4.35e-31,68;UBERON:0001017,9.42e-30,81;UBERON:0001016,3.73e-26,89;UBERON:0007023,2.30e-25,114;UBERON:0003075,3.99e-25,82;UBERON:0007284,3.99e-25,82;UBERON:0002346,1.14e-23,86;UBERON:0003056,2.56e-22,61;UBERON:0010314,8.45e-19,132;UBERON:0010371,1.67e-18,104;UBERON:0000025,8.17e-13,192;UBERON:0002021,1.09e-12,5;UBERON:0001872,1.35e-12,5;UBERON:0004121,1.21e-11,171;UBERON:0000924,1.21e-11,171;UBERON:0006601,1.21e-11,171;UBERON:0011216,1.26e-11,223;UBERON:0002680,9.64e-11,9;UBERON:0001895,9.64e-11,9;UBERON:0010092,9.64e-11,9;UBERON:0004111,1.62e-10,240;UBERON:0002771,4.36e-09,2;UBERON:0001954,6.73e-09,2;UBERON:0003022,6.73e-09,2;UBERON:0002421,6.73e-09,2;UBERON:0002600,6.73e-09,2;UBERON:0004733,5.66e-08,12;UBERON:0002028,5.66e-08,12;UBERON:0007277,5.66e-08,12;UBERON:0000349,2.07e-07,5;UBERON:0004732,2.47e-07,13;UBERON:0000483,3.42e-07,306;UBERON:0000119,4.75e-07,309 | |||
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|short_description=p3@SMARCA1 | |||
}} | }} |
Latest revision as of 08:52, 19 September 2015
Short description: | p3@SMARCA1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SMARCA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 47bp_to_ENST00000450039_5end |
EntrezGene: | SMARCA1 |
HGNC: | 11097 |
UniProt: | F6TQG2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data