FFCP PHASE1:Hg19::chr12:56583297..56583304,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6601 | |EntrezGene=6601 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11105 | |HGNC=11105 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000547356_5end | |association_with_transcript=0bp_to_ENST00000547356_5end | ||
|cluster_id=chr12:56583297..56583304,- | |||
|description=CAGE_peak_4_at_SMARCC2_5end | |description=CAGE_peak_4_at_SMARCC2_5end | ||
|id=chr12:56583297..56583304,- | |id=chr12:56583297..56583304,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.17e-21!57;UBERON:0005068!1.17e-21!57;UBERON:0006241!1.17e-21!57;UBERON:0007135!1.17e-21!57;UBERON:0000073!5.87e-21!94;UBERON:0001016!5.87e-21!94;UBERON:0001017!1.39e-20!82;UBERON:0002616!2.95e-20!59;UBERON:0005743!7.49e-20!86;UBERON:0000955!1.81e-19!69;UBERON:0006238!1.81e-19!69;UBERON:0002346!1.02e-17!90;UBERON:0003075!1.17e-17!86;UBERON:0007284!1.17e-17!86;UBERON:0002780!1.33e-15!41;UBERON:0001890!1.33e-15!41;UBERON:0006240!1.33e-15!41;UBERON:0001893!3.25e-15!34;UBERON:0002020!3.66e-15!34;UBERON:0003528!3.66e-15!34;UBERON:0002791!1.34e-14!33;UBERON:0003080!1.42e-14!42;UBERON:0001869!2.48e-14!32;UBERON:0000924!3.29e-13!173;UBERON:0006601!3.29e-13!173;UBERON:0003056!3.33e-13!61;UBERON:0004121!5.79e-13!169;UBERON:0000153!7.52e-12!129;UBERON:0007811!7.52e-12!129;UBERON:0000033!1.10e-11!123;UBERON:0002619!4.09e-11!22;UBERON:0007023!6.69e-11!115;UBERON:0000956!1.37e-10!25;UBERON:0000203!1.37e-10!25;UBERON:0001950!7.08e-10!20;UBERON:0003076!1.65e-08!15;UBERON:0003057!1.65e-08!15;UBERON:0004732!1.22e-07!13;UBERON:0000025!2.64e-07!194;UBERON:0004733!3.10e-07!12;UBERON:0002028!3.10e-07!12;UBERON:0007277!3.10e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.98e-22;34!UBERON:0002020;2.98e-22;34!UBERON:0001893;4.16e-22;34!UBERON:0000073;4.25e-22;53!UBERON:0002616;4.25e-22;53!UBERON:0001869;5.46e-22;32!UBERON:0002791;1.11e-21;32!UBERON:0002619;2.83e-21;22!UBERON:0002780;2.17e-20;41!UBERON:0001890;2.17e-20;41!UBERON:0001950;8.10e-19;20!UBERON:0000956;5.96e-18;25!UBERON:0000203;5.96e-18;25!UBERON:0001016;3.27e-14;83!UBERON:0000955;4.60e-14;68!UBERON:0004732;1.25e-12;13!UBERON:0001017;3.30e-12;75!UBERON:0004733;7.19e-12;12!UBERON:0002028;7.19e-12;12!UBERON:0000125;3.34e-10;9!UBERON:0002308;3.34e-10;9!UBERON:0002680;4.53e-09;9!UBERON:0001895;4.53e-09;9!UBERON:0002420;2.67e-08;9!UBERON:0007245;2.67e-08;9!UBERON:0010009;2.67e-08;9!UBERON:0010011;2.67e-08;9!UBERON:0000454;2.67e-08;9!UBERON:0009663;2.81e-08;7!UBERON:0001872;4.84e-08;5!UBERON:0002298;1.58e-07;6!UBERON:0007023;9.04e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,9.32e-40,56;UBERON:0005068,9.32e-40,56;UBERON:0006241,9.32e-40,56;UBERON:0007135,9.32e-40,56;UBERON:0000073,1.33e-38,53;UBERON:0002616,1.33e-38,53;UBERON:0001016,3.78e-35,89;UBERON:0000955,6.02e-34,68;UBERON:0006238,6.02e-34,68;UBERON:0002346,1.68e-33,86;UBERON:0001017,2.41e-33,81;UBERON:0003075,3.06e-33,82;UBERON:0007284,3.06e-33,82;UBERON:0002780,8.68e-28,41;UBERON:0001890,8.68e-28,41;UBERON:0003080,8.68e-28,41;UBERON:0006240,8.68e-28,41;UBERON:0001893,2.96e-27,34;UBERON:0003528,3.71e-27,34;UBERON:0002020,3.71e-27,34;UBERON:0010371,1.41e-26,104;UBERON:0001869,1.66e-25,32;UBERON:0002791,3.23e-25,32;UBERON:0003056,1.78e-24,61;UBERON:0002619,1.67e-21,22;UBERON:0004121,6.19e-21,171;UBERON:0000924,6.19e-21,171;UBERON:0006601,6.19e-21,171;UBERON:0010314,2.14e-19,132;UBERON:0001950,5.08e-19,20;UBERON:0000956,3.77e-18,25;UBERON:0000203,3.77e-18,25;UBERON:0007023,5.73e-17,114;UBERON:0000025,2.17e-13,192;UBERON:0003076,6.10e-13,15;UBERON:0003057,6.10e-13,15;UBERON:0004732,7.45e-13,13;UBERON:0004733,4.76e-12,12;UBERON:0002028,4.76e-12,12;UBERON:0007277,4.76e-12,12;UBERON:0011216,6.41e-12,223;UBERON:0000125,1.03e-10,9;UBERON:0002308,1.03e-10,9;UBERON:0004111,1.12e-09,240;UBERON:0002680,3.99e-09,9;UBERON:0001895,3.99e-09,9;UBERON:0010092,3.99e-09,9;UBERON:0009663,8.45e-09,7;UBERON:0002420,9.35e-09,9;UBERON:0007245,9.35e-09,9;UBERON:0010009,9.35e-09,9;UBERON:0010011,9.35e-09,9;UBERON:0000454,9.35e-09,9;UBERON:0000119,4.46e-08,309;UBERON:0001872,5.23e-08,5;UBERON:0002298,1.36e-07,6;UBERON:0000483,1.49e-07,306;UBERON:0001871,8.41e-07,6 | |||
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| ||
|short_description=p4@SMARCC2 | |short_description=p4@SMARCC2 | ||
}} | }} |
Latest revision as of 10:19, 19 September 2015
Short description: | p4@SMARCC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SMARCC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000547356_5end |
EntrezGene: | SMARCC2 |
HGNC: | 11105 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data