FFCP PHASE1:Hg19::chr11:66188503..66188511,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=266743 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18983 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IUM7 | |||
|association_with_transcript=28bp_to_ENST00000311034,NM_178864,uc001ohx.1,uc010rpc.1_5end | |||
|cluster_id=chr11:66188503..66188511,+ | |||
|description=CAGE_peak_1_at_NPAS4_5end | |||
|id=chr11:66188503..66188511,+ | |||
|ontology_enrichment_celltype=CL:0002322!6.06e-08!5 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,5.06e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.47e-15;82!UBERON:0007297;6.99e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.52e-50!94;UBERON:0001016!2.52e-50!94;UBERON:0001017!1.97e-49!82;UBERON:0005743!1.65e-48!86;UBERON:0007023!5.78e-45!115;UBERON:0001049!2.67e-44!57;UBERON:0005068!2.67e-44!57;UBERON:0006241!2.67e-44!57;UBERON:0007135!2.67e-44!57;UBERON:0000955!3.08e-38!69;UBERON:0006238!3.08e-38!69;UBERON:0002780!7.80e-37!41;UBERON:0001890!7.80e-37!41;UBERON:0006240!7.80e-37!41;UBERON:0002616!4.44e-36!59;UBERON:0003080!9.92e-36!42;UBERON:0002346!1.81e-34!90;UBERON:0003075!4.05e-33!86;UBERON:0007284!4.05e-33!86;UBERON:0001893!4.47e-29!34;UBERON:0002020!5.61e-29!34;UBERON:0003528!5.61e-29!34;UBERON:0001869!8.77e-29!32;UBERON:0000924!4.04e-28!173;UBERON:0006601!4.04e-28!173;UBERON:0002791!1.60e-27!33;UBERON:0002619!4.62e-27!22;UBERON:0004121!8.68e-27!169;UBERON:0003056!6.08e-25!61;UBERON:0001950!1.56e-24!20;UBERON:0000153!1.20e-23!129;UBERON:0007811!1.20e-23!129;UBERON:0000956!3.27e-23!25;UBERON:0000203!3.27e-23!25;UBERON:0000033!5.20e-21!123;UBERON:0001871!3.17e-10!7;UBERON:0000025!6.13e-10!194;UBERON:0003076!1.10e-09!15;UBERON:0003057!1.10e-09!15;UBERON:0001872!1.91e-09!5;UBERON:0000922!2.07e-09!612;UBERON:0001894!3.10e-09!7;UBERON:0006222!3.10e-09!7;UBERON:0004111!4.90e-09!241;UBERON:0000349!7.60e-09!5;UBERON:0003296!4.14e-08!4;UBERON:0010133!4.14e-08!4;UBERON:0000200!6.02e-08!6;UBERON:0004732!7.54e-08!13;UBERON:0000477!1.23e-07!286;UBERON:0000064!1.36e-07!219;UBERON:0000468!2.62e-07!659;UBERON:0002308!2.95e-07!9;UBERON:0000125!2.95e-07!9;UBERON:0002420!3.58e-07!9;UBERON:0007245!3.58e-07!9;UBERON:0010009!3.58e-07!9;UBERON:0010011!3.58e-07!9;UBERON:0000454!3.58e-07!9;UBERON:0002050!6.85e-07!605;UBERON:0005423!6.85e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;5.57e-30;32!UBERON:0003528;9.63e-28;34!UBERON:0002020;9.63e-28;34!UBERON:0001950;1.22e-27;20!UBERON:0002791;4.94e-27;32!UBERON:0001893;5.03e-27;34!UBERON:0002780;1.30e-26;41!UBERON:0001890;1.30e-26;41!UBERON:0002619;5.72e-25;22!UBERON:0000073;8.21e-22;53!UBERON:0002616;8.21e-22;53!UBERON:0000956;9.79e-22;25!UBERON:0000203;9.79e-22;25!UBERON:0000955;3.45e-21;68!UBERON:0001017;1.84e-17;75!UBERON:0001016;3.06e-14;83!UBERON:0001872;6.63e-12;5!UBERON:0006947;5.45e-11;3!UBERON:0004054;5.45e-11;3!UBERON:0007023;1.70e-10;114!UBERON:0000200;1.72e-10;6!UBERON:0002420;2.16e-10;9!UBERON:0007245;2.16e-10;9!UBERON:0010009;2.16e-10;9!UBERON:0010011;2.16e-10;9!UBERON:0000454;2.16e-10;9!UBERON:0000125;3.15e-10;9!UBERON:0002308;3.15e-10;9!UBERON:0003296;2.27e-09;4!UBERON:0010133;2.27e-09;4!UBERON:0000007;2.77e-09;2!UBERON:0001894;4.92e-09;7!UBERON:0000369;5.44e-09;4!UBERON:0002435;5.44e-09;4!UBERON:0000204;5.44e-09;4!UBERON:0001871;5.99e-09;6!UBERON:0009663;8.60e-09;7!UBERON:0005904;2.33e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.70e-42,89;UBERON:0001017,1.87e-41,81;UBERON:0002780,5.51e-38,41;UBERON:0001890,5.51e-38,41;UBERON:0003080,5.51e-38,41;UBERON:0006240,5.51e-38,41;UBERON:0000073,5.02e-37,53;UBERON:0002616,5.02e-37,53;UBERON:0000955,7.60e-35,68;UBERON:0006238,7.60e-35,68;UBERON:0001049,9.77e-35,56;UBERON:0005068,9.77e-35,56;UBERON:0006241,9.77e-35,56;UBERON:0007135,9.77e-35,56;UBERON:0001869,1.57e-32,32;UBERON:0007023,2.15e-31,114;UBERON:0002346,6.10e-31,86;UBERON:0001893,2.07e-30,34;UBERON:0003528,2.40e-30,34;UBERON:0002020,2.40e-30,34;UBERON:0003056,5.77e-29,61;UBERON:0002791,7.72e-29,32;UBERON:0003075,3.23e-28,82;UBERON:0007284,3.23e-28,82;UBERON:0001950,1.50e-27,20;UBERON:0004121,3.76e-25,171;UBERON:0000924,3.76e-25,171;UBERON:0006601,3.76e-25,171;UBERON:0002619,6.89e-25,22;UBERON:0010371,1.49e-22,104;UBERON:0000956,1.15e-21,25;UBERON:0000203,1.15e-21,25;UBERON:0011216,2.52e-17,223;UBERON:0010314,2.72e-16,132;UBERON:0001872,8.00e-12,5;UBERON:0006947,2.86e-11,3;UBERON:0004054,2.86e-11,3;UBERON:0000200,1.66e-10,6;UBERON:0002420,2.44e-10,9;UBERON:0007245,2.44e-10,9;UBERON:0010009,2.44e-10,9;UBERON:0010011,2.44e-10,9;UBERON:0000454,2.44e-10,9;UBERON:0000125,3.92e-10,9;UBERON:0002308,3.92e-10,9;UBERON:0000025,5.40e-10,192;UBERON:0000007,2.72e-09,2;UBERON:0003296,2.72e-09,4;UBERON:0010133,2.72e-09,4;UBERON:0001894,5.58e-09,7;UBERON:0006222,5.58e-09,7;UBERON:0001871,5.94e-09,6;UBERON:0000369,6.78e-09,4;UBERON:0002435,6.78e-09,4;UBERON:0000204,6.78e-09,4;UBERON:0010082,6.78e-09,4;UBERON:0009663,1.01e-08,7;UBERON:0005904,1.45e-08,4;UBERON:0004111,4.77e-08,240 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.731842236777572,0.132529768321485,0.464775771478074,0.621966330092223,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.8083912314573,6.18631050222156,6.70065061337395,3.82763250991898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.95903353436409,0.140669416410513,0,0,0,0.597743964753209,0.276283915531148,0.251932747854276,0,0,0,0,0,0,0.591860433821602,0,0,1.93866549219044,2.69027484669369,3.99227596002388,0,0,0,0,0,0,0.689486746482929,0,2.43074992906609,0,2.29133233388275,0,0.663475559587348,1.77328571372128,77.6624305925063,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.876214728748802,0.802577647298789,3.74823113160543,0,0,0,1.97292201424695,2.41981432097328,0.30607276163049,0.063186579628488,1.05226393590145,0,0,0,0,0,0,0,0,0,0,1.7472666824203,0,0,0,0.0821154570532092,0,0,0,0,0,2.089256266544,0,0,0,0,0,0,2.4023299700675,0,0,0,0,0,0,0,4.20294202096853,0,0,0,0,1.39641200636127,0,0,0,0,0,0.268733889946905,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0.160753148465019,0,0,0,0,4.13096985274568,0,0,1.78345599658994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,2.24795422962573,0,0,0,1.10043013569766,0,0,0,0,0,0,0,0,0,0,8.86068179966986,5.24712939078442,0.1251909307065,0,1.22021956690538,0.931446044120752,0.553394539744923,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,0.215649622793364,0,8.29993250259306,0,1.48802444071178,0,0,0,0,0,0,0,9.31323763898663,0,0.159633859057151,5.53814183450038,0,8.78297106295567,1.29180516505481,12.8492478233239,0,0,0,0,0,0,0,0.601682626794058,0,0,0,0,0,3.03919130782776,2.34323429584154,1.03343398250592,3.7415328014405,0.546974809018219,0,0,1.23109871051734,0,1.07140367175657,0.336283722218824,11.532346480496,15.0257046291856,0,0,0,0.611727596791485,2.69668371607681,0,0,0.549451649953598,1.09980912941201,0,0,0,0,1.21510125100316,0.632054446930906,0,0,0,0,0,0,0,0,0,1.69354820076372,0,0,0,0,0,0,0,0,0,1.45713297917742,5.38060765962843,11.1412434090366,0.356760272332706,0,4.39762066981717,6.79332796050031,0.154348316215889,0,0.470317296361523,0,0.707029641304878,0.196308467114945,0.297046400327086,0.8453114551668,0,0,0.128915775947154,0,0,0,0,0,0,0,0,3.60354898011848,0,6.87734892670021,0,0,0,0,0,0,0,0,0,0,0.985123076837112,0.267964130156178,0,0.20686599172379,0.426467963801962,0.952257725854961,0.0645889098360061,0.186224142887574,0,0,0.606351566874658,0,0.342233301085281,0.0673520530145875,0,0.665320713092027,0,0,0,0,0,1.58913877437726,0.406896178315738,0,0.402547587182052,0 | |||
|short_description=p1@NPAS4 | |||
}} |
Latest revision as of 14:27, 19 September 2015
Short description: | p1@NPAS4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NPAS4_5end |
Coexpression cluster: | NA |
Association with transcript: | 28bp_to_ENST00000311034, NM_178864, uc001ohx.1, uc010rpc.1_5end |
EntrezGene: | NPAS4 |
HGNC: | 18983 |
UniProt: | Q8IUM7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 5.06e-08 | 8 |