FFCP PHASE1:Hg19::chr2:204193149..204193156,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10152 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24011 | |||
|TSSclassifier=strong | |||
|UniProt=E7EP65 | |||
|association_with_transcript=19bp_to_ENST00000417864_5end | |||
|cluster_id=chr2:204193149..204193156,+ | |||
|coexpression_cluster_id=C2681 | |||
|description=CAGE_peak_5_at_ABI2_5end | |||
|id=chr2:204193149..204193156,+ | |||
|ontology_enrichment_celltype=CL:0002319!4.29e-10!25;CL:0000133!9.05e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002321;1.06e-07;15!CL:0002322;1.63e-07;5!CL:0002319;3.81e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.83e-08,8;CL:0002322,7.19e-08,5;CL:0002319,4.06e-07,25;CL:0000133,5.95e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.44e-10;82 | |||
|ontology_enrichment_disease=DOID:0050687!2.86e-12!143;DOID:162!5.69e-09!235;DOID:14566!8.08e-09!239;DOID:305!2.01e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:3095;4.60e-07;22!DOID:2994;4.60e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,5.01e-07,22;DOID:2994,5.01e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.89e-33!94;UBERON:0001016!1.89e-33!94;UBERON:0001017!2.61e-32!82;UBERON:0005743!3.51e-32!86;UBERON:0000955!6.14e-26!69;UBERON:0006238!6.14e-26!69;UBERON:0002346!2.71e-25!90;UBERON:0001049!4.09e-25!57;UBERON:0005068!4.09e-25!57;UBERON:0006241!4.09e-25!57;UBERON:0007135!4.09e-25!57;UBERON:0003075!3.41e-24!86;UBERON:0007284!3.41e-24!86;UBERON:0002616!6.14e-22!59;UBERON:0000924!4.77e-21!173;UBERON:0006601!4.77e-21!173;UBERON:0001893!1.19e-20!34;UBERON:0002020!1.80e-20!34;UBERON:0003528!1.80e-20!34;UBERON:0001869!3.26e-20!32;UBERON:0004121!5.38e-20!169;UBERON:0002791!5.64e-20!33;UBERON:0002780!1.87e-19!41;UBERON:0001890!1.87e-19!41;UBERON:0006240!1.87e-19!41;UBERON:0003056!1.88e-18!61;UBERON:0003080!1.97e-18!42;UBERON:0000033!2.54e-17!123;UBERON:0000956!2.91e-16!25;UBERON:0000203!2.91e-16!25;UBERON:0000153!3.96e-16!129;UBERON:0007811!3.96e-16!129;UBERON:0002619!9.93e-15!22;UBERON:0001950!2.37e-13!20;UBERON:0000475!5.44e-12!365;UBERON:0000119!9.01e-12!312;UBERON:0000483!3.01e-11!309;UBERON:0000025!1.32e-10!194;UBERON:0000477!2.00e-10!286;UBERON:0000481!6.72e-10!347;UBERON:0000922!8.49e-10!612;UBERON:0004111!1.90e-09!241;UBERON:0000468!8.85e-09!659;UBERON:0000064!1.27e-08!219;UBERON:0002050!4.60e-08!605;UBERON:0005423!4.60e-08!605;UBERON:0003076!7.16e-08!15;UBERON:0003057!7.16e-08!15;UBERON:0000923!7.29e-08!604;UBERON:0005291!7.29e-08!604;UBERON:0006598!7.29e-08!604;UBERON:0002532!7.29e-08!604;UBERON:0000480!3.00e-07!626;UBERON:0000467!3.08e-07!625;UBERON:0007023!5.48e-07!115;UBERON:0000062!5.59e-07!511;UBERON:0004732!5.96e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.34e-38;32!UBERON:0002791;4.26e-36;32!UBERON:0000956;1.52e-35;25!UBERON:0000203;1.52e-35;25!UBERON:0003528;5.11e-35;34!UBERON:0002020;5.11e-35;34!UBERON:0001893;9.47e-35;34!UBERON:0002619;6.01e-32;22!UBERON:0001950;6.90e-29;20!UBERON:0002780;1.30e-25;41!UBERON:0001890;1.30e-25;41!UBERON:0000073;4.23e-23;53!UBERON:0002616;4.23e-23;53!UBERON:0001017;1.77e-19;75!UBERON:0000955;1.96e-19;68!UBERON:0001016;3.87e-17;83!UBERON:0000200;1.90e-10;6!UBERON:0000349;2.43e-09;5!UBERON:0001871;5.06e-09;6!UBERON:0002420;7.09e-09;9!UBERON:0007245;7.09e-09;9!UBERON:0010009;7.09e-09;9!UBERON:0010011;7.09e-09;9!UBERON:0000454;7.09e-09;9!UBERON:0001872;8.56e-09;5!UBERON:0004732;2.24e-08;13!UBERON:0002021;3.14e-08;5!UBERON:0004733;1.76e-07;12!UBERON:0002028;1.76e-07;12!UBERON:0000369;2.36e-07;4!UBERON:0002435;2.36e-07;4!UBERON:0000204;2.36e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.90e-52,89;UBERON:0001017,8.74e-50,81;UBERON:0001049,8.79e-45,56;UBERON:0005068,8.79e-45,56;UBERON:0006241,8.79e-45,56;UBERON:0007135,8.79e-45,56;UBERON:0001869,1.73e-42,32;UBERON:0000073,1.30e-41,53;UBERON:0002616,1.30e-41,53;UBERON:0002791,2.12e-39,32;UBERON:0001893,2.14e-39,34;UBERON:0003528,4.07e-39,34;UBERON:0002020,4.07e-39,34;UBERON:0000955,6.83e-39,68;UBERON:0006238,6.83e-39,68;UBERON:0003075,2.47e-37,82;UBERON:0007284,2.47e-37,82;UBERON:0002346,2.76e-36,86;UBERON:0000956,2.36e-35,25;UBERON:0000203,2.36e-35,25;UBERON:0002780,3.09e-35,41;UBERON:0001890,3.09e-35,41;UBERON:0003080,3.09e-35,41;UBERON:0006240,3.09e-35,41;UBERON:0002619,6.01e-32,22;UBERON:0003056,7.67e-32,61;UBERON:0001950,7.13e-29,20;UBERON:0010371,1.95e-28,104;UBERON:0004121,1.13e-27,171;UBERON:0000924,1.13e-27,171;UBERON:0006601,1.13e-27,171;UBERON:0010314,2.59e-24,132;UBERON:0011216,2.23e-19,223;UBERON:0007023,1.44e-12,114;UBERON:0000025,8.15e-11,192;UBERON:0003076,1.51e-10,15;UBERON:0003057,1.51e-10,15;UBERON:0000200,2.11e-10,6;UBERON:0000349,2.35e-09,5;UBERON:0001871,5.19e-09,6;UBERON:0002420,7.06e-09,9;UBERON:0007245,7.06e-09,9;UBERON:0010009,7.06e-09,9;UBERON:0010011,7.06e-09,9;UBERON:0000454,7.06e-09,9;UBERON:0001872,9.93e-09,5;UBERON:0004732,1.23e-08,13;UBERON:0002021,2.63e-08,5;UBERON:0004733,1.03e-07,12;UBERON:0002028,1.03e-07,12;UBERON:0007277,1.03e-07,12;UBERON:0000369,2.21e-07,4;UBERON:0002435,2.21e-07,4;UBERON:0000204,2.21e-07,4;UBERON:0010082,2.21e-07,4;UBERON:0000483,2.74e-07,306;UBERON:0000119,4.68e-07,309 | |||
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| |||
|short_description=p5@ABI2 | |||
}} |
Latest revision as of 15:32, 19 September 2015
Short description: | p5@ABI2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ABI2_5end |
Coexpression cluster: | C2681_amygdala_duodenum_insula_rhabdomyosarcoma_medial_frontal_brain |
Association with transcript: | 19bp_to_ENST00000417864_5end |
EntrezGene: | ABI2 |
HGNC: | 24011 |
UniProt: | E7EP65 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.83e-08 | 8 |
embryonic stem cell | 7.19e-08 | 5 |
neural cell | 4.06e-07 | 25 |
neurectodermal cell | 5.95e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 5.01e-07 | 22 |
germ cell cancer | 5.01e-07 | 22 |