FFCP PHASE1:Hg19::chr12:58005243..58005248,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=115557 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30275 | |||
|TSSclassifier=strong | |||
|UniProt=Q86VW2 | |||
|association_with_transcript=25bp_to_ENST00000286494,NM_182947,uc001spa.2,uc001spb.2_5end | |||
|cluster_id=chr12:58005243..58005248,+ | |||
|coexpression_cluster_id=C3308 | |||
|description=CAGE_peak_3_at_ARHGEF25_5end | |||
|id=chr12:58005243..58005248,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.96e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.19e-28!115;UBERON:0000073!4.36e-27!94;UBERON:0001016!4.36e-27!94;UBERON:0001017!2.10e-26!82;UBERON:0001049!1.41e-24!57;UBERON:0005068!1.41e-24!57;UBERON:0006241!1.41e-24!57;UBERON:0007135!1.41e-24!57;UBERON:0005743!1.55e-24!86;UBERON:0000955!4.24e-23!69;UBERON:0006238!4.24e-23!69;UBERON:0002616!4.64e-23!59;UBERON:0002346!6.41e-22!90;UBERON:0003075!3.61e-20!86;UBERON:0007284!3.61e-20!86;UBERON:0003080!6.50e-19!42;UBERON:0002780!2.11e-18!41;UBERON:0001890!2.11e-18!41;UBERON:0006240!2.11e-18!41;UBERON:0001893!6.01e-18!34;UBERON:0002020!8.55e-18!34;UBERON:0003528!8.55e-18!34;UBERON:0001869!1.09e-17!32;UBERON:0002791!2.49e-17!33;UBERON:0000924!2.89e-17!173;UBERON:0006601!2.89e-17!173;UBERON:0002619!1.28e-16!22;UBERON:0000956!2.52e-16!25;UBERON:0000203!2.52e-16!25;UBERON:0004121!7.52e-16!169;UBERON:0001950!4.25e-15!20;UBERON:0003056!2.57e-14!61;UBERON:0000033!1.84e-13!123;UBERON:0000153!1.86e-13!129;UBERON:0007811!1.86e-13!129;UBERON:0000025!1.66e-11!194;UBERON:0000475!1.01e-10!365;UBERON:0004111!5.23e-10!241;UBERON:0000481!2.37e-09!347;UBERON:0000477!5.60e-09!286;UBERON:0000119!5.94e-09!312;UBERON:0000483!9.47e-09!309;UBERON:0000468!9.65e-09!659;UBERON:0000922!1.74e-07!612;UBERON:0003076!7.07e-07!15;UBERON:0003057!7.07e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.34e-27;22!UBERON:0001950;1.27e-24;20!UBERON:0000956;5.18e-23;25!UBERON:0000203;5.18e-23;25!UBERON:0001869;2.15e-19;32!UBERON:0003528;3.13e-18;34!UBERON:0002020;3.13e-18;34!UBERON:0001893;4.39e-18;34!UBERON:0002791;1.84e-17;32!UBERON:0002780;1.05e-12;41!UBERON:0001890;1.05e-12;41!UBERON:0000073;8.75e-12;53!UBERON:0002616;8.75e-12;53!UBERON:0001016;6.55e-10;83!UBERON:0001017;4.88e-09;75!UBERON:0001871;6.00e-09;6!UBERON:0000200;8.49e-09;6!UBERON:0007023;1.45e-08;114!UBERON:0000955;2.85e-08;68!UBERON:0002021;2.55e-07;5!UBERON:0000349;4.06e-07;5!UBERON:0001872;4.40e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.80e-30,114;UBERON:0002619,4.04e-27,22;UBERON:0001950,1.57e-24,20;UBERON:0001016,1.08e-23,89;UBERON:0000956,6.08e-23,25;UBERON:0000203,6.08e-23,25;UBERON:0001017,1.15e-21,81;UBERON:0001869,1.97e-21,32;UBERON:0001049,2.64e-21,56;UBERON:0005068,2.64e-21,56;UBERON:0006241,2.64e-21,56;UBERON:0007135,2.64e-21,56;UBERON:0001893,5.78e-21,34;UBERON:0003528,9.54e-21,34;UBERON:0002020,9.54e-21,34;UBERON:0000073,1.08e-20,53;UBERON:0002616,1.08e-20,53;UBERON:0002791,1.57e-19,32;UBERON:0000955,1.62e-19,68;UBERON:0006238,1.62e-19,68;UBERON:0002346,1.19e-18,86;UBERON:0002780,3.95e-17,41;UBERON:0001890,3.95e-17,41;UBERON:0003080,3.95e-17,41;UBERON:0006240,3.95e-17,41;UBERON:0003075,5.17e-17,82;UBERON:0007284,5.17e-17,82;UBERON:0004121,8.02e-14,171;UBERON:0000924,8.02e-14,171;UBERON:0006601,8.02e-14,171;UBERON:0010371,2.01e-13,104;UBERON:0003056,4.54e-13,61;UBERON:0010314,1.84e-12,132;UBERON:0011216,4.61e-12,223;UBERON:0001871,6.30e-09,6;UBERON:0000025,8.76e-09,192;UBERON:0000200,1.03e-08,6;UBERON:0002050,3.09e-08,564;UBERON:0000923,4.40e-08,560;UBERON:0010316,4.40e-08,560;UBERON:0005291,4.40e-08,560;UBERON:0006598,4.40e-08,560;UBERON:0010317,4.40e-08,560;UBERON:0002532,4.40e-08,560;UBERON:0004111,6.26e-08,240;UBERON:0002021,2.01e-07,5;UBERON:0000922,2.82e-07,592;UBERON:0000349,3.17e-07,5;UBERON:0001872,5.41e-07,5;UBERON:0005423,5.89e-07,581 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.281908808191942,2.00146596706261,2.68176656656373,3.48935409640147,0,0,0,0,0,0.218441372130172,0,0,0,2.6893005858071,1.20538905604795,2.19093027116212,0,0.492484232307152,0.816002764977012,0.940364164434263,0.572471974262113,0.410623275218653,0.627713197974014,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.12786256184353,0.361439152384566,0,0.869079113764942,0,0,0.189069634328136,0.221729397462564,0.614843499851882,1.17881167947941,0,0,0,0,0,0,0,0,0,0,0.694281003215189,0,0,0,0,0,0,0,0,0.760272105718513,0.24406205754817,0,0,0,0.22452937262617,0.225222960966644,0,0,0,0,0,0,0.993943903390637,0.506522046658319,1.72131935057184,2.58152958673932,0,0.560677600142307,1.06748995729705,0.74000264525148,0,0.134710672069688,0,0.454072282934794,1.15235184896,0.234321431833797,0,0,0,0.469737994575059,0,0.140450806702248,0,0,0.413303124703062,0,1.97813543422845,0,0,0,0,0,1.31693286264251,0,0.600952235626387,0.113432183160021,0.717558542755448,0.213557388818567,0,0.900273288253207,0.309157587715317,0.772921620136887,0,0,0.389748020644795,0.757301322732344,0.736399189138395,1.61646056818812,0.355009592516614,0.403008392910561,0.169560592310488,0,0,0,1.34171076742555,0.265059536642971,0.580969714347592,0.621966330092223,0.252320850875628,0.36497735907583,0,1.28648187638577,0,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,7.3504355692771,0,0,1.18157981336281,0,0,0.514703430895577,0,0,0.100528972411631,0,0.325808305310325,0,0,0.695582429850461,0.117408694235822,0,0.462985512576611,0,0.790204397959275,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0.308482478109971,0,0.857479297891735,0.672786506072164,0.43596006883328,0.07333828582095,0,0,0,0.797814349754612,0,0.514414748524284,0,0.266422179016099,0.142977993658148,1.08524321078289,1.64648067356154,0,0.710783897485092,0,1.20575750823834,0,1.19967589418468,0,0,0,0,2.29723871668228,0,0,0,0,0,0,0,0,0.508189248444927,0,2.31986643833309,0.502548796003046,3.82763250991898,0,0,0,0.49076596687656,0,0.542530047399471,1.03985430765404,0.713715955188647,1.10391690523754,0.819989904948992,0.601892199455438,0,0,0,0.184369168541703,0.434418072340414,0.391602314925481,1.02943027143257,0,0,0,0,0,1.5119514666484,0,0.306923946576125,0.280660094433074,0.256278298511402,0,1.44768529029247,1.48418066444991,0.154209693802656,0,0.164254312027618,0,0.232420756919918,0,0,0,0,2.00300284807389,1.04899531967539,0,0,0,0,0,0,0,0.431831832204279,0,0.812839312631559,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0.309123034943167,0.27470839445503,0.082509499920588,0,0,0,0.193341436584244,0,0.614014698904518,0.413509717453592,0.537101224341368,1.74020032697074,0.0852266274161009,0.267096106940212,0,0,0,0,1.85938219718914,4.40737285562896,1.3940745403212,0.308033580176089,1.06461206063404,0.869932992075073,0.37064843820784,0.572499546967965,0,0.316379424718726,0.571890581771475,0.511795582622668,0.42793898803392,0,3.92474320099615,0,1.37268514868027,0.706874414074119,0.404364963146632,3.17020642346017,1.68503382495592,0.975267478179181,0.731140468893853,0,0.272999822815972,0.848432591722276,0,1.10273068709225,1.32687795048244,0.876901770507525,1.15755106853338,1.9676842561399,0,0,0,0.573645408816206,0.294747123039363,0.35667105148125,0,0.422215270595328,0.329294892959902,1.51789269506286,1.74967360122491,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,1.37402137902306,0,0.223676107892416,0,0.19538809540204,0,0,0,0,0,0,1.02555725490326,0.242721043499027,0,0,0,0.296964680832639,0,3.97659059106519,3.93874365949436,0,0,3.3780065300479,2.98871982376605,1.10513566212459,0,1.22722419002586,0.123084805461069,0.933118762985422,0,0.179021174675609,0,4.34030984802508,0,0,0,3.33965153382665,1.99613798001194,0,0,2.17499872630438,0,0,0,0,3.49925536059905,5.55599983786535,0.885741385813839,0.120596438625408,7.62908681585416,8.18286523491062,9.45752380651352,4.38770794307945,0,0,1.46205491157214,0,0,0.179515288819544,0.325942115766024,0,0.915975934018623,0,0,0,0,0.676786981851542,0.784250137270958,0.671286347903371,0,0,0,0.163232808159148,0.141353071433941,0.649165919226273,3.98104772431402,2.21143911258348,4.888241159469,0.296521128680622,0,0,1.01101699471016,4.01288823649394,0.234264445725339,0,0.19566461893209,0,3.15667522279512,1.20990716048664,3.0607276163049,0.63186579628488,0.300646838828985,0.103688191397247,1.32930774541437,0.661983911750998,0.313932918407225,0,0.569219092059585,0.554698692052555,0,0,0,2.44617335538842,0,0,0,0,1.93978032976839,0.264768380074501,0.90392296312213,0.274083849293502,0,2.02594547058812,0,0,2.56143593687223,0.599428828746391,0,0.458146384663663,4.4614699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| |||
|short_description=p3@ARHGEF25 | |||
}} |
Latest revision as of 15:41, 19 September 2015
Short description: | p3@ARHGEF25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ARHGEF25_5end |
Coexpression cluster: | C3308_hippocampus_medial_cerebellum_middle_occipital_parietal_olfactory |
Association with transcript: | 25bp_to_ENST00000286494, NM_182947, uc001spa.2, uc001spb.2_5end |
EntrezGene: | ARHGEF25 |
HGNC: | 30275 |
UniProt: | Q86VW2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data