FFCP PHASE1:Hg19::chr14:29235961..29236008,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2290 | |EntrezGene=2290 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3811 | |HGNC=3811 | ||
|TSSclassifier=strong | |||
|UniProt=P55316 | |UniProt=P55316 | ||
|association_with_transcript=-278bp_to_ENST00000313071,NM_005249,uc001wqe.2_5end | |association_with_transcript=-278bp_to_ENST00000313071,NM_005249,uc001wqe.2_5end | ||
|cluster_id=chr14:29235961..29236008,+ | |||
|coexpression_cluster_id=C214 | |||
|description=CAGE_peak_1_at_FOXG1_5end | |description=CAGE_peak_1_at_FOXG1_5end | ||
|id=chr14:29235961..29236008,+ | |id=chr14:29235961..29236008,+ | ||
|ontology_enrichment_celltype=CL:0002319!3.93e-13!25;CL:0000133!1.13e-11!59;CL:0000243!7.81e-11!15;CL:0000125!7.81e-11!15;CL:0000030!7.81e-11!15;CL:0000339!7.81e-11!15;CL:0000095!2.32e-10!17;CL:0000123!2.32e-10!17;CL:0000333!1.70e-08!41;CL:0000221!2.41e-08!71;CL:0000128!9.77e-07!7;CL:0000126!9.77e-07!7;CL:0000127!9.77e-07!7;CL:0002453!9.77e-07!7 | |ontology_enrichment_celltype=CL:0002319!3.93e-13!25;CL:0000133!1.13e-11!59;CL:0000243!7.81e-11!15;CL:0000125!7.81e-11!15;CL:0000030!7.81e-11!15;CL:0000339!7.81e-11!15;CL:0000095!2.32e-10!17;CL:0000123!2.32e-10!17;CL:0000333!1.70e-08!41;CL:0000221!2.41e-08!71;CL:0000128!9.77e-07!7;CL:0000126!9.77e-07!7;CL:0000127!9.77e-07!7;CL:0002453!9.77e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0002319;3.18e-15;25!CL:0000243;3.81e-12;15!CL:0000125;3.81e-12;15!CL:0000095;7.80e-12;17!CL:0000128;7.31e-09;7!CL:0000126;7.31e-09;7!CL:0000127;7.31e-09;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.89e-15,25;CL:0000133,2.07e-13,59;CL:0000243,3.84e-12,15;CL:0000125,3.84e-12,15;CL:0000030,3.84e-12,15;CL:0000339,3.84e-12,15;CL:0000095,7.06e-12,17;CL:0000123,7.06e-12,17;CL:0000221,3.70e-10,72;CL:0000128,6.80e-09,7;CL:0000126,6.80e-09,7;CL:0000127,6.80e-09,7;CL:0002453,6.80e-09,7;CL:0000333,9.59e-09,41 | |||
|ontology_enrichment_development_v019=CL:0000339;3.81e-12;15!UBERON:0006238;7.22e-09;10!CL:0000133;3.11e-07;59 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!2.27e-31!61;UBERON:0001017!3.60e-31!82;UBERON:0005743!2.06e-30!86;UBERON:0002780!3.22e-29!41;UBERON:0001890!3.22e-29!41;UBERON:0006240!3.22e-29!41;UBERON:0000955!5.71e-29!69;UBERON:0006238!5.71e-29!69;UBERON:0001869!1.69e-28!32;UBERON:0000073!2.69e-28!94;UBERON:0001016!2.69e-28!94;UBERON:0003080!4.11e-28!42;UBERON:0001893!5.86e-28!34;UBERON:0002791!4.74e-27!33;UBERON:0000153!6.45e-27!129;UBERON:0007811!6.45e-27!129;UBERON:0003075!1.89e-26!86;UBERON:0007284!1.89e-26!86;UBERON:0000033!1.52e-25!123;UBERON:0002020!4.59e-25!34;UBERON:0003528!4.59e-25!34;UBERON:0002346!3.67e-24!90;UBERON:0002616!1.03e-22!59;UBERON:0004121!1.05e-22!169;UBERON:0000956!1.08e-22!25;UBERON:0000203!1.08e-22!25;UBERON:0001049!9.15e-22!57;UBERON:0005068!9.15e-22!57;UBERON:0006241!9.15e-22!57;UBERON:0007135!9.15e-22!57;UBERON:0000924!2.11e-21!173;UBERON:0006601!2.11e-21!173;UBERON:0002619!7.27e-20!22;UBERON:0001950!4.26e-18!20;UBERON:0000119!1.64e-11!312;UBERON:0000483!2.26e-11!309;UBERON:0000025!3.13e-11!194;UBERON:0000475!7.59e-11!365;UBERON:0000477!2.54e-08!286;UBERON:0000481!8.40e-08!347;UBERON:0007023!1.52e-07!115;UBERON:0000064!2.58e-07!219;UBERON:0004111!4.04e-07!241;UBERON:0002420!5.91e-07!9;UBERON:0007245!5.91e-07!9;UBERON:0010009!5.91e-07!9;UBERON:0010011!5.91e-07!9;UBERON:0000454!5.91e-07!9;UBERON:0001801!6.15e-07!14;UBERON:0000200!7.51e-07!6 | |ontology_enrichment_uberon=UBERON:0003056!2.27e-31!61;UBERON:0001017!3.60e-31!82;UBERON:0005743!2.06e-30!86;UBERON:0002780!3.22e-29!41;UBERON:0001890!3.22e-29!41;UBERON:0006240!3.22e-29!41;UBERON:0000955!5.71e-29!69;UBERON:0006238!5.71e-29!69;UBERON:0001869!1.69e-28!32;UBERON:0000073!2.69e-28!94;UBERON:0001016!2.69e-28!94;UBERON:0003080!4.11e-28!42;UBERON:0001893!5.86e-28!34;UBERON:0002791!4.74e-27!33;UBERON:0000153!6.45e-27!129;UBERON:0007811!6.45e-27!129;UBERON:0003075!1.89e-26!86;UBERON:0007284!1.89e-26!86;UBERON:0000033!1.52e-25!123;UBERON:0002020!4.59e-25!34;UBERON:0003528!4.59e-25!34;UBERON:0002346!3.67e-24!90;UBERON:0002616!1.03e-22!59;UBERON:0004121!1.05e-22!169;UBERON:0000956!1.08e-22!25;UBERON:0000203!1.08e-22!25;UBERON:0001049!9.15e-22!57;UBERON:0005068!9.15e-22!57;UBERON:0006241!9.15e-22!57;UBERON:0007135!9.15e-22!57;UBERON:0000924!2.11e-21!173;UBERON:0006601!2.11e-21!173;UBERON:0002619!7.27e-20!22;UBERON:0001950!4.26e-18!20;UBERON:0000119!1.64e-11!312;UBERON:0000483!2.26e-11!309;UBERON:0000025!3.13e-11!194;UBERON:0000475!7.59e-11!365;UBERON:0000477!2.54e-08!286;UBERON:0000481!8.40e-08!347;UBERON:0007023!1.52e-07!115;UBERON:0000064!2.58e-07!219;UBERON:0004111!4.04e-07!241;UBERON:0002420!5.91e-07!9;UBERON:0007245!5.91e-07!9;UBERON:0010009!5.91e-07!9;UBERON:0010011!5.91e-07!9;UBERON:0000454!5.91e-07!9;UBERON:0001801!6.15e-07!14;UBERON:0000200!7.51e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.19e-36;32!UBERON:0001893;5.88e-35;34!UBERON:0002791;5.99e-34;32!UBERON:0000956;7.87e-32;25!UBERON:0000203;7.87e-32;25!UBERON:0003528;9.26e-31;34!UBERON:0002020;9.26e-31;34!UBERON:0002780;2.76e-30;41!UBERON:0001890;2.76e-30;41!UBERON:0002619;8.22e-28;22!UBERON:0001950;2.66e-25;20!UBERON:0000073;5.46e-21;53!UBERON:0002616;5.46e-21;53!UBERON:0000955;1.41e-19;68!UBERON:0001017;1.43e-19;75!UBERON:0001016;5.60e-16;83!UBERON:0002420;1.82e-09;9!UBERON:0007245;1.82e-09;9!UBERON:0010009;1.82e-09;9!UBERON:0010011;1.82e-09;9!UBERON:0000454;1.82e-09;9!UBERON:0000200;4.65e-09;6!UBERON:0001872;6.50e-08;5!UBERON:0000349;6.55e-08;5!UBERON:0002021;6.87e-08;5!UBERON:0001871;7.57e-08;6!UBERON:0001801;4.19e-07;14!UBERON:0009663;5.32e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.64e-45,81;UBERON:0000955,1.88e-42,68;UBERON:0006238,1.88e-42,68;UBERON:0001016,3.72e-42,89;UBERON:0002780,6.55e-42,41;UBERON:0001890,6.55e-42,41;UBERON:0003080,6.55e-42,41;UBERON:0006240,6.55e-42,41;UBERON:0003056,1.85e-40,61;UBERON:0001869,4.67e-40,32;UBERON:0001893,1.39e-39,34;UBERON:0002791,3.30e-37,32;UBERON:0000073,6.27e-36,53;UBERON:0002616,6.27e-36,53;UBERON:0003528,2.29e-34,34;UBERON:0002020,2.29e-34,34;UBERON:0003075,1.03e-33,82;UBERON:0007284,1.03e-33,82;UBERON:0001049,3.38e-33,56;UBERON:0005068,3.38e-33,56;UBERON:0006241,3.38e-33,56;UBERON:0007135,3.38e-33,56;UBERON:0000956,8.28e-32,25;UBERON:0000203,8.28e-32,25;UBERON:0002346,2.83e-31,86;UBERON:0002619,8.62e-28,22;UBERON:0004121,4.62e-27,171;UBERON:0000924,4.62e-27,171;UBERON:0006601,4.62e-27,171;UBERON:0001950,2.79e-25,20;UBERON:0010371,1.23e-24,104;UBERON:0010314,3.20e-23,132;UBERON:0011216,5.79e-18,223;UBERON:0000025,2.01e-12,192;UBERON:0007023,9.10e-11,114;UBERON:0000483,1.18e-10,306;UBERON:0000119,2.52e-10,309;UBERON:0002420,1.80e-09,9;UBERON:0007245,1.80e-09,9;UBERON:0010009,1.80e-09,9;UBERON:0010011,1.80e-09,9;UBERON:0000454,1.80e-09,9;UBERON:0000200,4.69e-09,6;UBERON:0001872,6.47e-08,5;UBERON:0000349,6.65e-08,5;UBERON:0002021,6.93e-08,5;UBERON:0001871,7.81e-08,6;UBERON:0004111,2.70e-07,240;UBERON:0001801,4.71e-07,14;UBERON:0009663,5.22e-07,7 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0.783556884599516,0,0,0,0,0,0.331397375727916,24.2037052722639,25.915864705031,23.3699228923959,23.4207743419443,3.81675280038043,13.8720470046092,1.56727360739044,78.1424244867785,94.3064788752172,79.594033503105,0,0,0,0,0,3.2511385896376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02699751316684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,0,0,0,0,0,24.0118435596732,28.6030922726708,26.1747661365516,16.0449367484698,0,0,0,0,0,0,0,0,0.79504962946682,0,0,0.56530794192401,0,1.6507082516404,2.50793959844173,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0.366403487860815,0,0,0,0.496971951695318,0,0,0.573673241497627,2.12801029319014,0,0,0.24666754841716,0.622422070799533,0.538842688278752,1.14423332179421,1.66493170409425,1.72852777344,0,0.312160076830321,1.1409436430889,0,0,0,0.140450806702248,0,0.368502951935304,0.103325781175765,0,0,4.55080680969013,0.718618141816238,0.168336113954066,0.500474079487857,0,0,0,0.150238058906597,2.49550802952046,0,0.213557388818567,0.211931901159562,0.300091096084402,0.206105058476878,0,0.18611685633159,0,0,0,0,0,0,0,0.847802961552438,0,0.272746120590835,0,0.243947412259191,0.132529768321485,0.813357600086629,0.207322110030741,1.00928340350251,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,23.8411015465858,0,2.94017422771084,0,0,0,0,0,9.43622956641891,0,0,0,5.46271826435325,0.977424915930974,2.07986957055916,43.299402607582,35.2428431124234,3.75707821554629,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0.383382679165211,0.492663237895943,0,0,0,0,0,0,0,22.2394179829517,0.102827492703324,0,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,1.690605505112,2.6593811658487,6.24044621468197,0.514414748524284,0,0.532844358032199,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,150.424017539698,357.88459810846,272.197662097749,258.980146206903,280.693050727392,0,0,0,0,1.00034104211935,0,0,0,0,0,0,0,8.27784570340039,0,0.553107505625109,0.781952530212746,0.979005787313703,1.02943027143257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.0012303175483,0,0,0,0,0,0.364182336013434,3.2781103739856,0.451199612907412,0,0,1.46139224653261,0,0,0,0,0,0.541892875087706,0,0.509752546090077,0,0,0,0,0,0.328014645699706,0,0.206082023295445,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0.170453254832202,0,0,0,0,0.10115778085555,0.464845549297286,0.31481234683064,0,4.00443654228915,1.59691809095107,0,1.29726953372744,0.286249773483982,0,0,0,4.86205803491534,0,0,0,0,0.54907405947211,0,0.202182481573316,1.58510321173008,0.421258456238981,13.1661109554189,0,0,0,0.424216295861138,23.731704490251,0,0,0,6.94530641120025,7.21484227251296,0,0.92947049429925,2.25356482025793,0.143411352204052,0.196498082026242,0,0,0,0,1.13841952129715,0.699869440489966,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,6.86112604746889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,4.45447021248958,0,70.5844829914072,65.5519480472989,0,0,1.26675244876796,0.398495976502139,0,0,19.2265123104051,18.2165512082383,0,0,0,0,0,0,0,65.9146267344749,67.8134797563133,201.609935981206,0,0,0,0,0,0.236387681767936,0,0,3.99337488346572,38.9726209758089,53.5448187496811,0,0,0,46.2903187994882,0,0,0,0,0.922255617552241,2.42345639906385,7.60531603454057,0,0,0,0,0,0,3.83512623049207,1.9606253431774,2.01385904371011,3.98482838720789,0,1.89898258075224,0,0,2.380275037163,0,0.0884575645033392,0,0,0,0,19.411526298435,4.01288823649394,33.0312868472728,0,0,0,0,0,388.712407270722,1.13735843331278,7.81681780955361,7.36186158920455,0,0,0,0,9.67672456501295,4.43758953642044,0.173559738335131,0,0,0,0,0,0,0,2.5217144286989,0,1.80784592624426,0,29.4097625320425,65.5266738143345,0,0,0,0,0,0,0,0,0,0,0.543616824294456,1.255234155748,18.4616773921742,5.77901179803038,16.8117680838741,12.0476733424954,0,0.429765441419957,0,0,0.229160424011684,0,0.199679000498991,0,0,0.201550417460179,0,0,0,0,0,0,0,54.0756189070326,68.7827200863457,0,0.137539436597234,0,0,0,92.8860721301197,0,0,0.157363764404994,4.64641480685389,0,0,0,0,0.25426853765475,0.542999601753713,0,0,4.7892076624995,0,0,0.113312091520126,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,2.82697373250422,49.6198180781512,64.1858153384326,60.3420286005329,0,0,0,179.991574052036,31.9949844382993,0,0,0,0,1.7390523433299,0,0,0,0,0.251567901752575,0,5.72100170992309,3.02461847526478,5.28486481981454,5.91420599958536,1.59296767163702,0,0.931577741257556,0,0,0.521745061811734,0,0,0,0.727394636810238,0,2.32016879939247,0,0.400027764663154,0,0,1.26184898228651,0,0,1.56596575179127,0,5.32501690944818,1.95789363605174,0,0,0.438568099157414,0,0,0,0,0,8.20421881678932,57.7920263114235,0,0,0,5.2417575815426,0,0,0,0,0,1.13503190713367,0,1.39879507719444,21.7727041011541,0,0,0,0,0,0,0,0,0.318004350653419,0,32.0228299314188,0,0,62.4950360188551,5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| ||
|short_description=p1@FOXG1 | |short_description=p1@FOXG1 | ||
}} | }} |
Latest revision as of 16:24, 19 September 2015
Short description: | p1@FOXG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FOXG1_5end |
Coexpression cluster: | C214_Neurons_Neural_duodenum_temporal_occipital_parietal_brain |
Association with transcript: | -278bp_to_ENST00000313071, NM_005249, uc001wqe.2_5end |
EntrezGene: | FOXG1 |
HGNC: | 3811 |
UniProt: | P55316 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.89e-15 | 25 |
neurectodermal cell | 2.07e-13 | 59 |
glial cell (sensu Vertebrata) | 3.84e-12 | 15 |
glial cell | 3.84e-12 | 15 |
glioblast | 3.84e-12 | 15 |
glioblast (sensu Vertebrata) | 3.84e-12 | 15 |
neuron associated cell | 7.06e-12 | 17 |
neuron associated cell (sensu Vertebrata) | 7.06e-12 | 17 |
ectodermal cell | 3.70e-10 | 72 |
oligodendrocyte | 6.80e-09 | 7 |
macroglial cell | 6.80e-09 | 7 |
astrocyte | 6.80e-09 | 7 |
oligodendrocyte precursor cell | 6.80e-09 | 7 |
migratory neural crest cell | 9.59e-09 | 41 |