FFCP PHASE1:Hg19::chr7:100081505..100081541,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:100081505..100081541,+ to FFCP PHASE1:Hg19::chr7:100081505..100081541,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=222950 | |EntrezGene=222950 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22009 | |HGNC=22009 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZVC0 | |UniProt=Q6ZVC0 | ||
|association_with_transcript=-8bp_to_ENST00000300179,ENST00000423930,NM_173564,uc003uvd.1_5end | |||
|cluster_id=chr7:100081505..100081541,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_2_at_NYAP1_5end | |||
|id=chr7:100081505..100081541,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000540;1.75e-07;6!CL:0000404;1.75e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.88e-10,8;CL:0000540,1.91e-07,6;CL:0000031,1.91e-07,6;CL:0000404,1.91e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.88e-13;82!CL:0000031;1.75e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.84e-39!82;UBERON:0000073!2.31e-38!94;UBERON:0001016!2.31e-38!94;UBERON:0005743!4.18e-38!86;UBERON:0001049!6.61e-37!57;UBERON:0005068!6.61e-37!57;UBERON:0006241!6.61e-37!57;UBERON:0007135!6.61e-37!57;UBERON:0002346!6.53e-36!90;UBERON:0003075!1.17e-35!86;UBERON:0007284!1.17e-35!86;UBERON:0002616!3.10e-33!59;UBERON:0000955!1.35e-30!69;UBERON:0006238!1.35e-30!69;UBERON:0002780!6.45e-28!41;UBERON:0001890!6.45e-28!41;UBERON:0006240!6.45e-28!41;UBERON:0003056!3.11e-27!61;UBERON:0003080!9.21e-27!42;UBERON:0000924!6.92e-26!173;UBERON:0006601!6.92e-26!173;UBERON:0001893!2.65e-25!34;UBERON:0002020!2.78e-25!34;UBERON:0003528!2.78e-25!34;UBERON:0004121!2.78e-25!169;UBERON:0002791!1.67e-24!33;UBERON:0001869!2.61e-24!32;UBERON:0000153!7.93e-23!129;UBERON:0007811!7.93e-23!129;UBERON:0000033!8.26e-23!123;UBERON:0000956!3.12e-19!25;UBERON:0000203!3.12e-19!25;UBERON:0007023!5.48e-19!115;UBERON:0002619!9.69e-18!22;UBERON:0000119!8.01e-17!312;UBERON:0001950!4.33e-16!20;UBERON:0000483!4.63e-16!309;UBERON:0000025!1.06e-13!194;UBERON:0000064!4.58e-13!219;UBERON:0003076!4.09e-11!15;UBERON:0003057!4.09e-11!15;UBERON:0000922!5.29e-11!612;UBERON:0000477!3.77e-10!286;UBERON:0000475!5.75e-10!365;UBERON:0004111!1.09e-09!241;UBERON:0004732!1.28e-09!13;UBERON:0000468!1.36e-09!659;UBERON:0000481!3.50e-09!347;UBERON:0004733!4.48e-09!12;UBERON:0002028!4.48e-09!12;UBERON:0007277!4.48e-09!12;UBERON:0002050!8.08e-09!605;UBERON:0005423!8.08e-09!605;UBERON:0000923!1.45e-08!604;UBERON:0005291!1.45e-08!604;UBERON:0006598!1.45e-08!604;UBERON:0002532!1.45e-08!604;UBERON:0002420!1.24e-07!9;UBERON:0007245!1.24e-07!9;UBERON:0010009!1.24e-07!9;UBERON:0010011!1.24e-07!9;UBERON:0000454!1.24e-07!9;UBERON:0002308!1.76e-07!9;UBERON:0000125!1.76e-07!9;UBERON:0002680!4.22e-07!9;UBERON:0001895!4.22e-07!9;UBERON:0010092!4.22e-07!9;UBERON:0000467!4.96e-07!625;UBERON:0000480!6.49e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.66e-45;32!UBERON:0001893;5.96e-44;34!UBERON:0003528;1.10e-43;34!UBERON:0002020;1.10e-43;34!UBERON:0002791;2.40e-42;32!UBERON:0002780;1.58e-39;41!UBERON:0001890;1.58e-39;41!UBERON:0000956;4.98e-39;25!UBERON:0000203;4.98e-39;25!UBERON:0000073;2.20e-38;53!UBERON:0002616;2.20e-38;53!UBERON:0002619;2.87e-38;22!UBERON:0001950;1.40e-34;20!UBERON:0000955;1.35e-25;68!UBERON:0001017;1.58e-25;75!UBERON:0001016;1.40e-22;83!UBERON:0004732;1.52e-14;13!UBERON:0004733;2.32e-13;12!UBERON:0002028;2.32e-13;12!UBERON:0002420;1.24e-12;9!UBERON:0007245;1.24e-12;9!UBERON:0010009;1.24e-12;9!UBERON:0010011;1.24e-12;9!UBERON:0000454;1.24e-12;9!UBERON:0000125;2.21e-12;9!UBERON:0002308;2.21e-12;9!UBERON:0000200;2.79e-12;6!UBERON:0002298;1.25e-10;6!UBERON:0001872;1.47e-10;5!UBERON:0000349;1.76e-10;5!UBERON:0001871;1.80e-10;6!UBERON:0002021;5.95e-10;5!UBERON:0002680;2.53e-09;9!UBERON:0001895;2.53e-09;9!UBERON:0007023;2.60e-09;114!UBERON:0009663;2.61e-09;7!UBERON:0011216;3.94e-09;132!UBERON:0000369;1.91e-08;4!UBERON:0002435;1.91e-08;4!UBERON:0000204;1.91e-08;4!UBERON:0010314;1.86e-07;132!UBERON:0001870;8.07e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.17e-72,56;UBERON:0005068,5.17e-72,56;UBERON:0006241,5.17e-72,56;UBERON:0007135,5.17e-72,56;UBERON:0001017,7.72e-71,81;UBERON:0001016,6.69e-69,89;UBERON:0000073,3.47e-67,53;UBERON:0002616,3.47e-67,53;UBERON:0003075,6.65e-61,82;UBERON:0007284,6.65e-61,82;UBERON:0002346,8.74e-60,86;UBERON:0000955,4.71e-56,68;UBERON:0006238,4.71e-56,68;UBERON:0002780,1.31e-54,41;UBERON:0001890,1.31e-54,41;UBERON:0003080,1.31e-54,41;UBERON:0006240,1.31e-54,41;UBERON:0001869,1.98e-50,32;UBERON:0001893,3.87e-50,34;UBERON:0003528,4.28e-50,34;UBERON:0002020,4.28e-50,34;UBERON:0003056,1.10e-49,61;UBERON:0002791,7.41e-47,32;UBERON:0010371,4.69e-46,104;UBERON:0004121,2.48e-39,171;UBERON:0000924,2.48e-39,171;UBERON:0006601,2.48e-39,171;UBERON:0000956,3.98e-39,25;UBERON:0000203,3.98e-39,25;UBERON:0002619,2.32e-38,22;UBERON:0010314,1.31e-36,132;UBERON:0001950,1.12e-34,20;UBERON:0007023,9.98e-29,114;UBERON:0011216,2.77e-27,223;UBERON:0003076,9.84e-18,15;UBERON:0003057,9.84e-18,15;UBERON:0000025,2.59e-15,192;UBERON:0004732,1.52e-14,13;UBERON:0004733,2.39e-13,12;UBERON:0002028,2.39e-13,12;UBERON:0007277,2.39e-13,12;UBERON:0002420,1.45e-12,9;UBERON:0007245,1.45e-12,9;UBERON:0010009,1.45e-12,9;UBERON:0010011,1.45e-12,9;UBERON:0000454,1.45e-12,9;UBERON:0000125,2.91e-12,9;UBERON:0002308,2.91e-12,9;UBERON:0000200,3.41e-12,6;UBERON:0002298,8.67e-11,6;UBERON:0001872,1.54e-10,5;UBERON:0000349,1.57e-10,5;UBERON:0001871,1.68e-10,6;UBERON:0004111,2.42e-10,240;UBERON:0000119,3.00e-10,309;UBERON:0002021,4.91e-10,5;UBERON:0000483,5.24e-10,306;UBERON:0009663,3.34e-09,7;UBERON:0002680,3.62e-09,9;UBERON:0001895,3.62e-09,9;UBERON:0010092,3.62e-09,9;UBERON:0000369,2.13e-08,4;UBERON:0002435,2.13e-08,4;UBERON:0000204,2.13e-08,4;UBERON:0010082,2.13e-08,4;UBERON:0000922,7.73e-08,592;UBERON:0001870,7.97e-07,3 | |||
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| ||
|short_description=p2@NYAP1 | |||
}} | }} |
Latest revision as of 07:16, 20 September 2015
Short description: | p2@NYAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NYAP1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -8bp_to_ENST00000300179, ENST00000423930, NM_173564, uc003uvd.1_5end |
EntrezGene: | NYAP1 |
HGNC: | 22009 |
UniProt: | Q6ZVC0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.88e-10 | 8 |
neuron | 1.91e-07 | 6 |
neuroblast | 1.91e-07 | 6 |
electrically signaling cell | 1.91e-07 | 6 |