FFCP PHASE1:Hg19::chrX:31285042..31285103,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:31285042..31285103,- to FFCP PHASE1:Hg19::chrX:31285042..31285103,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1756 | |EntrezGene=1756 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2928 | |HGNC=2928 | ||
|TSSclassifier=strong | |||
|UniProt=B4DSV7,Q8N754 | |UniProt=B4DSV7,Q8N754 | ||
|association_with_transcript=0bp_to_ENST00000378680,ENST00000378723_5end | |||
|cluster_id=chrX:31285042..31285103,- | |||
|coexpression_cluster_id=C4870 | |||
|description=CAGE_peak_1_at_DMD_5end | |||
|id=chrX:31285042..31285103,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.80e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.48e-23!123;UBERON:0005743!4.65e-23!86;UBERON:0000153!1.87e-22!129;UBERON:0007811!1.87e-22!129;UBERON:0001017!9.17e-22!82;UBERON:0007023!6.90e-21!115;UBERON:0004121!9.44e-21!169;UBERON:0000955!5.33e-20!69;UBERON:0006238!5.33e-20!69;UBERON:0000073!3.36e-19!94;UBERON:0001016!3.36e-19!94;UBERON:0002616!4.99e-19!59;UBERON:0000924!1.02e-18!173;UBERON:0006601!1.02e-18!173;UBERON:0000481!2.76e-18!347;UBERON:0003075!1.14e-17!86;UBERON:0007284!1.14e-17!86;UBERON:0000477!5.19e-17!286;UBERON:0001049!6.40e-17!57;UBERON:0005068!6.40e-17!57;UBERON:0006241!6.40e-17!57;UBERON:0007135!6.40e-17!57;UBERON:0000475!2.11e-16!365;UBERON:0002346!4.94e-15!90;UBERON:0003056!5.88e-15!61;UBERON:0003080!1.95e-14!42;UBERON:0002780!5.90e-14!41;UBERON:0001890!5.90e-14!41;UBERON:0006240!5.90e-14!41;UBERON:0000062!6.95e-13!511;UBERON:0001893!1.23e-12!34;UBERON:0001869!1.80e-12!32;UBERON:0002020!2.44e-12!34;UBERON:0003528!2.44e-12!34;UBERON:0002791!3.41e-12!33;UBERON:0004111!3.66e-12!241;UBERON:0000119!1.18e-10!312;UBERON:0000468!1.58e-10!659;UBERON:0000956!2.79e-10!25;UBERON:0000203!2.79e-10!25;UBERON:0000483!5.19e-10!309;UBERON:0002619!1.20e-09!22;UBERON:0002365!1.42e-09!31;UBERON:0002330!1.42e-09!31;UBERON:0000064!1.50e-09!219;UBERON:0000025!1.95e-09!194;UBERON:0001048!6.73e-09!168;UBERON:0001950!8.01e-09!20;UBERON:0000467!8.57e-09!625;UBERON:0000480!1.51e-08!626;UBERON:0000922!3.55e-08!612;UBERON:0002530!5.25e-08!59;UBERON:0002107!1.24e-07!19;UBERON:0006925!1.24e-07!19;UBERON:0008836!1.24e-07!19;UBERON:0001007!1.85e-07!155;UBERON:0001555!1.85e-07!155;UBERON:0007026!1.85e-07!155;UBERON:0004119!4.08e-07!169;UBERON:0000925!4.08e-07!169;UBERON:0006595!4.08e-07!169;UBERON:0002050!8.62e-07!605;UBERON:0005423!8.62e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.37e-11;32!UBERON:0001893;2.83e-11;34!UBERON:0002791;3.31e-11;32!UBERON:0003528;4.24e-11;34!UBERON:0002020;4.24e-11;34!UBERON:0002780;1.05e-10;41!UBERON:0001890;1.05e-10;41!UBERON:0000956;1.60e-10;25!UBERON:0000203;1.60e-10;25!UBERON:0002619;7.73e-10;22!UBERON:0001017;1.27e-09;75!UBERON:0000073;1.89e-09;53!UBERON:0002616;1.89e-09;53!UBERON:0002365;2.91e-09;31!UBERON:0002330;2.91e-09;31!UBERON:0001950;5.36e-09;20!UBERON:0000955;5.83e-09;68!UBERON:0002107;1.51e-07;19!UBERON:0006925;1.51e-07;19!UBERON:0001016;2.92e-07;83!UBERON:0002368;3.08e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,5.47e-22,223;UBERON:0001017,8.35e-22,81;UBERON:0007023,3.20e-21,114;UBERON:0000955,5.27e-20,68;UBERON:0006238,5.27e-20,68;UBERON:0004121,1.17e-18,171;UBERON:0000924,1.17e-18,171;UBERON:0006601,1.17e-18,171;UBERON:0001016,1.28e-17,89;UBERON:0003075,1.93e-17,82;UBERON:0007284,1.93e-17,82;UBERON:0010314,5.90e-17,132;UBERON:0001049,9.23e-17,56;UBERON:0005068,9.23e-17,56;UBERON:0006241,9.23e-17,56;UBERON:0007135,9.23e-17,56;UBERON:0000073,6.59e-16,53;UBERON:0002616,6.59e-16,53;UBERON:0010371,5.23e-15,104;UBERON:0002346,7.50e-15,86;UBERON:0003056,1.17e-14,61;UBERON:0002780,3.20e-14,41;UBERON:0001890,3.20e-14,41;UBERON:0003080,3.20e-14,41;UBERON:0006240,3.20e-14,41;UBERON:0001893,7.14e-13,34;UBERON:0001869,1.05e-12,32;UBERON:0003528,1.44e-12,34;UBERON:0002020,1.44e-12,34;UBERON:0002791,3.70e-12,32;UBERON:0004111,1.62e-11,240;UBERON:0000956,1.81e-10,25;UBERON:0000203,1.81e-10,25;UBERON:0002619,8.05e-10,22;UBERON:0002365,1.22e-09,31;UBERON:0002330,1.22e-09,31;UBERON:0000119,2.83e-09,309;UBERON:0000025,4.53e-09,192;UBERON:0001950,5.59e-09,20;UBERON:0001048,9.56e-09,160;UBERON:0000483,1.14e-08,306;UBERON:0002530,2.93e-08,59;UBERON:0001007,9.60e-08,145;UBERON:0001555,9.60e-08,145;UBERON:0007026,9.60e-08,145;UBERON:0002107,1.56e-07,19;UBERON:0006925,1.56e-07,19;UBERON:0008836,1.56e-07,19;UBERON:0000922,2.90e-07,592;UBERON:0004119,2.94e-07,160;UBERON:0000925,2.94e-07,160;UBERON:0006595,2.94e-07,160 | |||
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| ||
|short_description=p1@DMD | |||
}} | }} |
Latest revision as of 21:02, 24 September 2015
Short description: | p1@DMD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DMD_5end |
Coexpression cluster: | C4870_Lens_seminal_gall_Fibroblast_glioblastoma_Smooth_ductus |
Association with transcript: | 0bp_to_ENST00000378680, ENST00000378723_5end |
EntrezGene: | DMD |
HGNC: | 2928 |
UniProt: | B4DSV7Q8N754 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data