FFCP PHASE1:Hg19::chrX:33357642..33357657,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1756 | |EntrezGene=1756 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2928 | |HGNC=2928 | ||
|TSSclassifier=strong | |||
|UniProt=P11532,Q4G0X0,Q8N754 | |UniProt=P11532,Q4G0X0,Q8N754 | ||
|association_with_transcript=68bp_to_NM_000109,uc004ddb.1,uc004ddf.2_5end | |association_with_transcript=68bp_to_NM_000109,uc004ddb.1,uc004ddf.2_5end | ||
|cluster_id=chrX:33357642..33357657,- | |||
|coexpression_cluster_id=C1062 | |coexpression_cluster_id=C1062 | ||
|description=CAGE_peak_16_at_DMD_5end | |description=CAGE_peak_16_at_DMD_5end | ||
|id=chrX:33357642..33357657,- | |id=chrX:33357642..33357657,- | ||
|ontology_enrichment_celltype=CL:0002150!1.53e-09!3;CL:0000861!1.53e-09!3 | |ontology_enrichment_celltype=CL:0002150!1.53e-09!3;CL:0000861!1.53e-09!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;5.06e-15;1!DOID:4549;5.06e-15;1!DOID:5861;5.06e-15;1!DOID:6496;5.06e-15;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,4.73e-15,1;DOID:4549,4.73e-15,1;DOID:5861,4.73e-15,1;DOID:6496,4.73e-15,1 | |||
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|short_description=p16@DMD | |short_description=p16@DMD | ||
}} | }} |
Latest revision as of 22:10, 24 September 2015
Short description: | p16@DMD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_DMD_5end |
Coexpression cluster: | C1062_extraskeletal_pineal_amygdala_middle_medial_parietal_hippocampus |
Association with transcript: | 68bp_to_NM_000109, uc004ddb.1, uc004ddf.2_5end |
EntrezGene: | DMD |
HGNC: | 2928 |
UniProt: | P11532Q4G0X0Q8N754 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 4.73e-15 | 1 |
extraosseous chondrosarcoma | 4.73e-15 | 1 |
myxoid chondrosarcoma | 4.73e-15 | 1 |
extraskeletal myxoid chondrosarcoma | 4.73e-15 | 1 |