FFCP PHASE1:Hg19::chr7:107968952..107968990,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4897 | |EntrezGene=4897 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7994 | |HGNC=7994 | ||
|TSSclassifier=strong | |||
|UniProt=C9JF43 | |UniProt=C9JF43 | ||
|association_with_transcript=-20bp_to_ENST00000442580_5end | |association_with_transcript=-20bp_to_ENST00000442580_5end | ||
|cluster_id=chr7:107968952..107968990,- | |||
|coexpression_cluster_id=C276 | |coexpression_cluster_id=C276 | ||
|description=CAGE_peak_5_at_NRCAM_5end | |description=CAGE_peak_5_at_NRCAM_5end | ||
|id=chr7:107968952..107968990,- | |id=chr7:107968952..107968990,- | ||
|ontology_enrichment_celltype=CL:0002319!4.84e-11!25;CL:0000128!6.51e-11!7;CL:0000126!6.51e-11!7;CL:0000127!6.51e-11!7;CL:0002453!6.51e-11!7;CL:0000095!2.52e-08!17;CL:0000123!2.52e-08!17;CL:0000243!7.30e-08!15;CL:0000125!7.30e-08!15;CL:0000030!7.30e-08!15;CL:0000339!7.30e-08!15;CL:0002605!1.70e-07!3;CL:0000133!2.29e-07!59 | |ontology_enrichment_celltype=CL:0002319!4.84e-11!25;CL:0000128!6.51e-11!7;CL:0000126!6.51e-11!7;CL:0000127!6.51e-11!7;CL:0002453!6.51e-11!7;CL:0000095!2.52e-08!17;CL:0000123!2.52e-08!17;CL:0000243!7.30e-08!15;CL:0000125!7.30e-08!15;CL:0000030!7.30e-08!15;CL:0000339!7.30e-08!15;CL:0002605!1.70e-07!3;CL:0000133!2.29e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000128;1.88e-20;7!CL:0000126;1.88e-20;7!CL:0000127;1.88e-20;7!CL:0002605;2.64e-13;3!CL:0002319;1.26e-12;25!CL:0000047;9.92e-09;2!CL:0000243;5.25e-08;15!CL:0000125;5.25e-08;15!CL:0002322;3.83e-07;5!CL:0000095;4.34e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,1.66e-20,7;CL:0000126,1.66e-20,7;CL:0000127,1.66e-20,7;CL:0002453,1.66e-20,7;CL:0002605,2.60e-13,3;CL:0002319,9.70e-13,25;CL:0000133,3.99e-09,59;CL:0000243,5.00e-08,15;CL:0000125,5.00e-08,15;CL:0000030,5.00e-08,15;CL:0000339,5.00e-08,15;CL:0000047,7.91e-08,8;CL:0000095,4.16e-07,17;CL:0000123,4.16e-07,17;CL:0000221,5.24e-07,72;CL:0000333,5.24e-07,41;CL:0002322,7.82e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.28e-13;3!CL:0000339;5.25e-08;15!CL:0000133;5.47e-07;59 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.05e-45,56;UBERON:0005068,1.05e-45,56;UBERON:0006241,1.05e-45,56;UBERON:0007135,1.05e-45,56;UBERON:0001017,3.05e-45,81;UBERON:0000073,2.64e-41,53;UBERON:0002616,2.64e-41,53;UBERON:0001016,5.22e-40,89;UBERON:0000955,7.05e-36,68;UBERON:0006238,7.05e-36,68;UBERON:0003075,3.28e-34,82;UBERON:0007284,3.28e-34,82;UBERON:0002346,2.70e-32,86;UBERON:0010371,1.73e-25,104;UBERON:0002780,9.10e-25,41;UBERON:0001890,9.10e-25,41;UBERON:0003080,9.10e-25,41;UBERON:0006240,9.10e-25,41;UBERON:0003076,3.38e-24,15;UBERON:0003057,3.38e-24,15;UBERON:0010314,4.38e-20,132;UBERON:0004121,4.38e-20,171;UBERON:0000924,4.38e-20,171;UBERON:0006601,4.38e-20,171;UBERON:0004733,1.26e-19,12;UBERON:0002028,1.26e-19,12;UBERON:0007277,1.26e-19,12;UBERON:0003056,1.53e-19,61;UBERON:0001893,4.26e-18,34;UBERON:0004732,5.18e-18,13;UBERON:0011216,8.84e-17,223;UBERON:0002037,1.26e-16,6;UBERON:0006215,1.26e-16,6;UBERON:0007023,5.63e-16,114;UBERON:0000956,1.26e-15,25;UBERON:0000203,1.26e-15,25;UBERON:0002791,3.71e-14,32;UBERON:0001869,4.44e-14,32;UBERON:0003528,3.36e-13,34;UBERON:0002020,3.36e-13,34;UBERON:0001896,7.50e-12,3;UBERON:0005290,7.50e-12,3;UBERON:0010096,7.50e-12,3;UBERON:0002680,5.61e-11,9;UBERON:0001895,5.61e-11,9;UBERON:0010092,5.61e-11,9;UBERON:0000025,1.19e-10,192;UBERON:0000200,7.20e-10,6;UBERON:0002619,4.20e-09,22;UBERON:0002784,8.72e-09,4;UBERON:0001894,1.10e-08,7;UBERON:0006222,1.10e-08,7;UBERON:0002771,1.91e-08,2;UBERON:0001905,2.23e-08,2;UBERON:0002757,2.23e-08,2;UBERON:0010134,2.23e-08,2;UBERON:0005408,2.23e-08,2;UBERON:0001899,2.23e-08,2;UBERON:0004111,6.47e-08,240;UBERON:0001950,8.96e-08,20 | |||
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|short_description=p5@NRCAM | |short_description=p5@NRCAM | ||
}} | }} |
Latest revision as of 02:47, 25 September 2015
Short description: | p5@NRCAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NRCAM_5end |
Coexpression cluster: | C276_mesothelioma_kidney_renal_small_clear_cerebellum_Renal |
Association with transcript: | -20bp_to_ENST00000442580_5end |
EntrezGene: | NRCAM |
HGNC: | 7994 |
UniProt: | C9JF43 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 1.66e-20 | 7 |
macroglial cell | 1.66e-20 | 7 |
astrocyte | 1.66e-20 | 7 |
oligodendrocyte precursor cell | 1.66e-20 | 7 |
astrocyte of the cerebral cortex | 2.60e-13 | 3 |
neural cell | 9.70e-13 | 25 |
neurectodermal cell | 3.99e-09 | 59 |
glial cell (sensu Vertebrata) | 5.00e-08 | 15 |
glial cell | 5.00e-08 | 15 |
glioblast | 5.00e-08 | 15 |
glioblast (sensu Vertebrata) | 5.00e-08 | 15 |
neuronal stem cell | 7.91e-08 | 8 |
neuron associated cell | 4.16e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 4.16e-07 | 17 |
ectodermal cell | 5.24e-07 | 72 |
migratory neural crest cell | 5.24e-07 | 41 |
embryonic stem cell | 7.82e-07 | 5 |