FFCP PHASE1:Hg19::chr7:110731140..110731155,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:110731140..110731155,+
|short_description=p2@LRRN3
|description=CAGE_peak_2_at_LRRN3_5end
|association_with_transcript=0bp_to_ENST00000464835_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54674 | |EntrezGene=54674 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17200 | |HGNC=17200 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000464835_5end | |||
|cluster_id=chr7:110731140..110731155,+ | |||
|coexpression_cluster_id=C1605 | |||
|description=CAGE_peak_2_at_LRRN3_5end | |||
|id=chr7:110731140..110731155,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000625;2.50e-10;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,2.93e-10,11 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.56e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.97e-32!57;UBERON:0005068!1.97e-32!57;UBERON:0006241!1.97e-32!57;UBERON:0007135!1.97e-32!57;UBERON:0007023!7.84e-31!115;UBERON:0002616!8.23e-30!59;UBERON:0002780!4.70e-29!41;UBERON:0001890!4.70e-29!41;UBERON:0006240!4.70e-29!41;UBERON:0003080!7.79e-28!42;UBERON:0001017!3.05e-27!82;UBERON:0005743!2.34e-25!86;UBERON:0002020!5.21e-25!34;UBERON:0003528!5.21e-25!34;UBERON:0001893!5.94e-25!34;UBERON:0001869!1.62e-24!32;UBERON:0000073!2.63e-24!94;UBERON:0001016!2.63e-24!94;UBERON:0002791!2.95e-24!33;UBERON:0003075!3.16e-24!86;UBERON:0007284!3.16e-24!86;UBERON:0000955!1.34e-23!69;UBERON:0006238!1.34e-23!69;UBERON:0002346!8.00e-23!90;UBERON:0000956!3.96e-20!25;UBERON:0000203!3.96e-20!25;UBERON:0003056!1.25e-19!61;UBERON:0002619!4.56e-18!22;UBERON:0000153!1.04e-17!129;UBERON:0007811!1.04e-17!129;UBERON:0001950!1.02e-16!20;UBERON:0000033!2.47e-16!123;UBERON:0004121!4.64e-15!169;UBERON:0000924!1.62e-14!173;UBERON:0006601!1.62e-14!173;UBERON:0001871!3.86e-07!7;UBERON:0002420!9.38e-07!9;UBERON:0007245!9.38e-07!9;UBERON:0010009!9.38e-07!9;UBERON:0010011!9.38e-07!9;UBERON:0000454!9.38e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.63e-33;32!UBERON:0003528;4.69e-32;34!UBERON:0002020;4.69e-32;34!UBERON:0000956;1.65e-31;25!UBERON:0000203;1.65e-31;25!UBERON:0001893;1.76e-31;34!UBERON:0002791;2.05e-31;32!UBERON:0002780;2.53e-30;41!UBERON:0001890;2.53e-30;41!UBERON:0002619;3.49e-28;22!UBERON:0000073;1.44e-26;53!UBERON:0002616;1.44e-26;53!UBERON:0001950;5.24e-26;20!UBERON:0000955;2.97e-17;68!UBERON:0001017;5.06e-17;75!UBERON:0001016;5.79e-14;83!UBERON:0007023;4.80e-10;114!UBERON:0001871;2.11e-09;6!UBERON:0000200;9.82e-09;6!UBERON:0001894;4.97e-08;7!UBERON:0011216;1.36e-07;132!UBERON:0002021;1.70e-07;5!UBERON:0001872;1.72e-07;5!UBERON:0000349;3.22e-07;5!UBERON:0004733;5.38e-07;12!UBERON:0002028;5.38e-07;12!UBERON:0002420;5.76e-07;9!UBERON:0007245;5.76e-07;9!UBERON:0010009;5.76e-07;9!UBERON:0010011;5.76e-07;9!UBERON:0000454;5.76e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.49e-50,56;UBERON:0005068,4.49e-50,56;UBERON:0006241,4.49e-50,56;UBERON:0007135,4.49e-50,56;UBERON:0000073,6.72e-48,53;UBERON:0002616,6.72e-48,53;UBERON:0002780,1.23e-42,41;UBERON:0001890,1.23e-42,41;UBERON:0003080,1.23e-42,41;UBERON:0006240,1.23e-42,41;UBERON:0001017,4.72e-41,81;UBERON:0003075,2.55e-40,82;UBERON:0007284,2.55e-40,82;UBERON:0002346,6.76e-39,86;UBERON:0001016,6.20e-38,89;UBERON:0001869,7.45e-37,32;UBERON:0000955,2.87e-36,68;UBERON:0006238,2.87e-36,68;UBERON:0003528,4.76e-36,34;UBERON:0002020,4.76e-36,34;UBERON:0001893,5.83e-36,34;UBERON:0002791,2.89e-34,32;UBERON:0003056,3.83e-32,61;UBERON:0000956,1.27e-31,25;UBERON:0000203,1.27e-31,25;UBERON:0010371,2.43e-31,104;UBERON:0007023,3.24e-30,114;UBERON:0002619,2.82e-28,22;UBERON:0001950,4.39e-26,20;UBERON:0004121,1.41e-24,171;UBERON:0000924,1.41e-24,171;UBERON:0006601,1.41e-24,171;UBERON:0010314,1.76e-24,132;UBERON:0011216,2.00e-15,223;UBERON:0001871,2.23e-09,6;UBERON:0003076,4.49e-09,15;UBERON:0003057,4.49e-09,15;UBERON:0000200,1.02e-08,6;UBERON:0001894,5.64e-08,7;UBERON:0006222,5.64e-08,7;UBERON:0001872,1.49e-07,5;UBERON:0002021,1.61e-07,5;UBERON:0000025,2.22e-07,192;UBERON:0000349,3.11e-07,5;UBERON:0004733,4.15e-07,12;UBERON:0002028,4.15e-07,12;UBERON:0007277,4.15e-07,12;UBERON:0002420,5.59e-07,9;UBERON:0007245,5.59e-07,9;UBERON:0010009,5.59e-07,9;UBERON:0010011,5.59e-07,9;UBERON:0000454,5.59e-07,9 | |||
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| ||
|short_description=p2@LRRN3 | |||
}} | }} |
Latest revision as of 03:44, 25 September 2015
Short description: | p2@LRRN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LRRN3_5end |
Coexpression cluster: | C1605_CD4_temporal_occipital_duodenum_Neural_mycosis_medial |
Association with transcript: | 0bp_to_ENST00000464835_5end |
EntrezGene: | LRRN3 |
HGNC: | 17200 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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CD8-positive, alpha-beta T cell | 2.93e-10 | 11 |