FFCP PHASE1:Hg19::chr7:110731140..110731155,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:110731140..110731155,+ to FFCP PHASE1:Hg19::chr7:110731140..110731155,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54674 | |EntrezGene=54674 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17200 | |HGNC=17200 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000464835_5end | |||
|cluster_id=chr7:110731140..110731155,+ | |||
|coexpression_cluster_id=C1605 | |||
|description=CAGE_peak_2_at_LRRN3_5end | |||
|id=chr7:110731140..110731155,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000625;2.50e-10;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,2.93e-10,11 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.56e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.97e-32!57;UBERON:0005068!1.97e-32!57;UBERON:0006241!1.97e-32!57;UBERON:0007135!1.97e-32!57;UBERON:0007023!7.84e-31!115;UBERON:0002616!8.23e-30!59;UBERON:0002780!4.70e-29!41;UBERON:0001890!4.70e-29!41;UBERON:0006240!4.70e-29!41;UBERON:0003080!7.79e-28!42;UBERON:0001017!3.05e-27!82;UBERON:0005743!2.34e-25!86;UBERON:0002020!5.21e-25!34;UBERON:0003528!5.21e-25!34;UBERON:0001893!5.94e-25!34;UBERON:0001869!1.62e-24!32;UBERON:0000073!2.63e-24!94;UBERON:0001016!2.63e-24!94;UBERON:0002791!2.95e-24!33;UBERON:0003075!3.16e-24!86;UBERON:0007284!3.16e-24!86;UBERON:0000955!1.34e-23!69;UBERON:0006238!1.34e-23!69;UBERON:0002346!8.00e-23!90;UBERON:0000956!3.96e-20!25;UBERON:0000203!3.96e-20!25;UBERON:0003056!1.25e-19!61;UBERON:0002619!4.56e-18!22;UBERON:0000153!1.04e-17!129;UBERON:0007811!1.04e-17!129;UBERON:0001950!1.02e-16!20;UBERON:0000033!2.47e-16!123;UBERON:0004121!4.64e-15!169;UBERON:0000924!1.62e-14!173;UBERON:0006601!1.62e-14!173;UBERON:0001871!3.86e-07!7;UBERON:0002420!9.38e-07!9;UBERON:0007245!9.38e-07!9;UBERON:0010009!9.38e-07!9;UBERON:0010011!9.38e-07!9;UBERON:0000454!9.38e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.63e-33;32!UBERON:0003528;4.69e-32;34!UBERON:0002020;4.69e-32;34!UBERON:0000956;1.65e-31;25!UBERON:0000203;1.65e-31;25!UBERON:0001893;1.76e-31;34!UBERON:0002791;2.05e-31;32!UBERON:0002780;2.53e-30;41!UBERON:0001890;2.53e-30;41!UBERON:0002619;3.49e-28;22!UBERON:0000073;1.44e-26;53!UBERON:0002616;1.44e-26;53!UBERON:0001950;5.24e-26;20!UBERON:0000955;2.97e-17;68!UBERON:0001017;5.06e-17;75!UBERON:0001016;5.79e-14;83!UBERON:0007023;4.80e-10;114!UBERON:0001871;2.11e-09;6!UBERON:0000200;9.82e-09;6!UBERON:0001894;4.97e-08;7!UBERON:0011216;1.36e-07;132!UBERON:0002021;1.70e-07;5!UBERON:0001872;1.72e-07;5!UBERON:0000349;3.22e-07;5!UBERON:0004733;5.38e-07;12!UBERON:0002028;5.38e-07;12!UBERON:0002420;5.76e-07;9!UBERON:0007245;5.76e-07;9!UBERON:0010009;5.76e-07;9!UBERON:0010011;5.76e-07;9!UBERON:0000454;5.76e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.49e-50,56;UBERON:0005068,4.49e-50,56;UBERON:0006241,4.49e-50,56;UBERON:0007135,4.49e-50,56;UBERON:0000073,6.72e-48,53;UBERON:0002616,6.72e-48,53;UBERON:0002780,1.23e-42,41;UBERON:0001890,1.23e-42,41;UBERON:0003080,1.23e-42,41;UBERON:0006240,1.23e-42,41;UBERON:0001017,4.72e-41,81;UBERON:0003075,2.55e-40,82;UBERON:0007284,2.55e-40,82;UBERON:0002346,6.76e-39,86;UBERON:0001016,6.20e-38,89;UBERON:0001869,7.45e-37,32;UBERON:0000955,2.87e-36,68;UBERON:0006238,2.87e-36,68;UBERON:0003528,4.76e-36,34;UBERON:0002020,4.76e-36,34;UBERON:0001893,5.83e-36,34;UBERON:0002791,2.89e-34,32;UBERON:0003056,3.83e-32,61;UBERON:0000956,1.27e-31,25;UBERON:0000203,1.27e-31,25;UBERON:0010371,2.43e-31,104;UBERON:0007023,3.24e-30,114;UBERON:0002619,2.82e-28,22;UBERON:0001950,4.39e-26,20;UBERON:0004121,1.41e-24,171;UBERON:0000924,1.41e-24,171;UBERON:0006601,1.41e-24,171;UBERON:0010314,1.76e-24,132;UBERON:0011216,2.00e-15,223;UBERON:0001871,2.23e-09,6;UBERON:0003076,4.49e-09,15;UBERON:0003057,4.49e-09,15;UBERON:0000200,1.02e-08,6;UBERON:0001894,5.64e-08,7;UBERON:0006222,5.64e-08,7;UBERON:0001872,1.49e-07,5;UBERON:0002021,1.61e-07,5;UBERON:0000025,2.22e-07,192;UBERON:0000349,3.11e-07,5;UBERON:0004733,4.15e-07,12;UBERON:0002028,4.15e-07,12;UBERON:0007277,4.15e-07,12;UBERON:0002420,5.59e-07,9;UBERON:0007245,5.59e-07,9;UBERON:0010009,5.59e-07,9;UBERON:0010011,5.59e-07,9;UBERON:0000454,5.59e-07,9 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.563817616383885,1.0007329835313,0,0,0,0,0,0,0,0,0,3.83675694176145,1.98838425436749,0.672325146451775,0,0,0,0.246242116153576,0,0,10.304495536718,3.83248390204076,9.41569796961021,0,0,0,0,0,0.619264493264304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0.605399502633369,0.736555271975129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983548850569165,0.393010762749165,0.411202997999018,12.5389871543009,0,0,0,5.45911238737351,0,0,0,3.71464827204458,3.64166173167659,60.5131488941528,54.4409535038121,105.778126293294,12.6043578687751,25.148837840433,14.6349733326968,28.3273356743915,1.14966148080576,3.77990190030893,5.31341353240956,8.28270077242652,5.85975108470777,6.65316431113862,11.7448592880663,13.1826209489051,11.2437653897111,6.39298580518846,3.28451198768419,1.20964045934839,0,1.44824403882799,0,0,0,0,0,0,0.795285947051099,0,2.07976597760949,1.77383517970051,2.19586964232815,1.37528029272598,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97577561356255,1.01304409331664,0.132409180813219,0.286836620748814,0,0,0,0.49333509683432,0.311211035399766,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0.816616685019573,0.61417158655884,1.65321249881225,5.94001428641027,1.48360157567134,0.910161361938026,1.43723628363248,1.0100166837244,0.250237039743928,0.277064115484183,0.438977620880838,0,2.40380894250555,0.226864366320042,0.538168907066586,1.70845911054854,0.211931901159562,0.300091096084402,0.412210116953756,0.772921620136887,0.558350568994769,0.506328996723799,0.389748020644795,0.504867548488229,0.276149695926898,0.80823028409406,1.42003837006646,0.806016785821122,0.847802961552438,0,0,0,0.243947412259191,0.132529768321485,0.580969714347592,0.310983165046111,0,1.09493207722749,0,0.643240938192885,0,6.03678306441573,3.60939740834793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,1.02940686179115,0,0,0,0,0,0,0,1.73895607462615,1.05667824812239,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,1.71072446022705,0.205654985406647,0,1.71495859578347,0.224262168690721,0.43596006883328,0.66004457238855,0,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,1.14861935834114,0,0.289562613335158,0.61642896765115,0,0,0.197030760201927,0,0.128343036279748,17.024339822905,7.8083912314573,1.54657762555539,4.18790663335872,3.18969375826582,0,0,0,1.8403723757871,5.50187573165645,0,0.207970861530807,0.356857977594324,0.157702415033935,0.117141414992713,0.601892199455438,0,1.03473071292505,0.664225598535437,0.184369168541703,0.781952530212746,0,0.343143423810856,3.10152039184331,1.94142780736755,0.74709290462411,0,0,0,0.992431231275107,0.153461973288062,0,0.128139149255701,1.02341449813341,0.321707842287215,0,0,0.177561725313127,0.328508624055237,1.03850885836724,0,0,0,0.0920809889358963,0.114814448164607,0,0.393373244878272,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0.0915694648183434,0,0,0,1.6068392984416,0.193341436584244,0.616194468458578,0.460511024178389,0.137836572484531,0.322260734604821,0.290033387828457,0,0.356128142586949,0,0,0,0,0,0.31481234683064,0,0.616067160352178,0,1.73986598415015,0.37064843820784,0.143124886741991,0.372158369359667,0.632758849437452,0.190630193923825,0,0.855877976067841,0,0,0.179872457583315,0.823611089208164,0.353437207037059,0.606547444719948,0,0,0,0.243713489631284,0,0.409499734223957,0,0,0,0.66343897524122,0.438450885253763,0,0.655894752046633,0.405820753925408,0.6196469961995,0.845086807596724,0.717056761020258,0.196498082026242,0.7133421029625,1.77380532035299,0.633322905892992,0.658589785919804,0,0,0,0,0,0.376575203107117,0,0,0,0,1.01489521846434,0,0.569647187174163,4.04994018278241,3.70226045777575,1.94541993357815,1.62009431171434,0.79312517629427,0.427296284509893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46174797895425,1.89318974933188,0,0,0,0.73254089635947,3.03401304373784,0,0,0,0.296964680832639,0,9.94147647766298,8.01815673539923,0.111308705022906,0,0,0,0.828851746593443,0,0,0,0.933118762985422,0,0,0,0.0986434056369336,2.3948309234694,0,4.84666373047609,10.2972588959655,0,0,0,0,0,0,0,1.72371686620732,0.583209226766509,0.347249989866585,9.74315524395223,8.56234714240396,10.6807215421958,17.1397852893398,5.31985714116385,4.16832254592548,0,0,1.15425387755696,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,1.11255605286265,0,0,0,9.30471150890992,0,0.265372693510018,1.22206028986725,1.18608451472249,1.48276726735803,1.14864144456001,1.41542379259422,0.802577647298789,5.15381780595746,0.91227394607833,0,0,0.394584402849391,2.41981432097328,12.8550559884806,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0,0,0,0,0,1.58186518546373,0,0,13.4218887426463,0,0,0,3.39676336289621,0,0.229073192331831,0,0,0,0,0,0,0,0,3.60252173225874,0.958337652243951,0,0,4.20619766846903,4.74780082162832,1.14580212005842,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| ||
|short_description=p2@LRRN3 | |||
}} | }} |
Latest revision as of 03:44, 25 September 2015
Short description: | p2@LRRN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LRRN3_5end |
Coexpression cluster: | C1605_CD4_temporal_occipital_duodenum_Neural_mycosis_medial |
Association with transcript: | 0bp_to_ENST00000464835_5end |
EntrezGene: | LRRN3 |
HGNC: | 17200 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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CD8-positive, alpha-beta T cell | 2.93e-10 | 11 |