FFCP PHASE1:Mm9::chr11:71564182..71564193,+: Difference between revisions
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{{FFCP|EntrezGene=216881|HGNC=|MCL_coexpression_id=20|UniProt=Q80XH4|association_with_transcript=0bp_to_ENSMUST00000021168_5end|description=CAGE_peak_5_at_Wscd1_5end|id=chr11:71564182..71564193,+|ontology_enrichment_celltype=CL:0000117!1.54e-21!23;CL:0000337!1.54e-21!23;CL:0002319!1.39e-15!43;CL:0000221!4.98e-15!44;CL:0000133!4.98e-15!44;CL:0000540!6.99e-13!33;CL:0000047!6.99e-13!33;CL:0000031!6.99e-13!33;CL:0000404!6.99e-13!33;CL:0000055!3.37e-12!50;CL:0000393!6.89e-10!39;CL:0000211!6.89e-10!39;CL:0002609!2.88e-07!6|ontology_enrichment_celltype_v019_2=CL:0000117,7.06e-18,23;CL:0000337,7.06e-18,23;CL:0002610,1.37e-12,3;CL:0000540,6.98e-12,33;CL:0000047,6.98e-12,33;CL:0000031,6.98e-12,33;CL:0000404,6.98e-12,33;CL:0002319,1.96e-10,43;CL:0000221,3.78e-10,44;CL:0000133,3.78e-10,44;CL:0000393,9.24e-10,39;CL:0000211,9.24e-10,39;CL:0002611,1.38e-08,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!6.07e-30!75;UBERON:0001016!6.07e-30!75;UBERON:0001017!1.21e-29!73;UBERON:0005743!1.21e-29!73;UBERON:0001049!1.99e-24!52;UBERON:0005068!1.99e-24!52;UBERON:0006241!1.99e-24!52;UBERON:0007135!1.99e-24!52;UBERON:0004121!2.68e-24!102;UBERON:0000924!2.68e-24!102;UBERON:0006601!2.68e-24!102;UBERON:0000033!3.38e-24!63;UBERON:0000955!3.76e-24!50;UBERON:0006238!3.76e-24!50;UBERON:0002616!3.22e-23!49;UBERON:0002020!3.21e-22!34;UBERON:0002346!2.35e-21!71;UBERON:0003075!2.35e-21!71;UBERON:0007284!2.35e-21!71;UBERON:0003056!9.61e-21!49;UBERON:0002791!1.13e-18!29;UBERON:0003528!1.13e-18!29;UBERON:0001893!1.13e-18!29;UBERON:0003080!2.50e-18!40;UBERON:0002780!1.40e-17!39;UBERON:0001890!1.40e-17!39;UBERON:0006240!1.40e-17!39;UBERON:0007811!4.47e-17!86;UBERON:0000153!1.69e-14!94;UBERON:0000956!1.78e-12!21;UBERON:0001869!1.78e-12!21;UBERON:0000203!1.78e-12!21;UBERON:0002619!1.12e-08!17;UBERON:0002298!8.92e-08!6;UBERON:0002420!1.63e-07!8;UBERON:0007245!1.63e-07!8;UBERON:0010009!1.63e-07!8;UBERON:0010011!1.63e-07!8;UBERON:0000454!1.63e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.87e-27,54;UBERON:0001017,4.30e-26,73;UBERON:0001016,2.67e-25,75;UBERON:0001049,1.83e-22,52;UBERON:0005068,1.83e-22,52;UBERON:0006241,1.83e-22,52;UBERON:0007135,1.83e-22,52;UBERON:0004121,3.39e-19,95;UBERON:0000924,3.39e-19,95;UBERON:0006601,3.39e-19,95;UBERON:0002020,2.47e-18,34;UBERON:0002346,1.28e-17,64;UBERON:0003075,1.28e-17,64;UBERON:0007284,1.28e-17,64;UBERON:0002616,2.49e-15,46;UBERON:0003076,4.77e-15,12;UBERON:0003057,4.77e-15,12;UBERON:0010371,5.00e-15,73;UBERON:0000955,6.03e-15,47;UBERON:0006238,6.03e-15,47;UBERON:0003528,4.65e-13,29;UBERON:0002791,4.65e-13,29;UBERON:0001893,4.65e-13,29;UBERON:0004684,1.37e-12,3;UBERON:0002275,1.37e-12,3;UBERON:0002780,2.86e-11,39;UBERON:0001890,2.86e-11,39;UBERON:0006240,2.86e-11,39;UBERON:0010314,3.27e-11,92;UBERON:0003080,6.18e-11,40;UBERON:0002240,2.54e-10,6;UBERON:0005174,2.54e-10,6;UBERON:0001137,2.54e-10,6;UBERON:0000956,6.81e-10,21;UBERON:0001869,6.81e-10,21;UBERON:0000203,6.81e-10,21;UBERON:0001896,5.24e-09,2;UBERON:0002298,5.24e-09,2;UBERON:0005290,5.24e-09,2;UBERON:0010096,5.24e-09,2;UBERON:0002256,1.38e-08,2;UBERON:0003056,1.53e-08,49;UBERON:0000025,2.25e-08,114;UBERON:0004111,1.36e-07,122;UBERON:0011216,2.10e-07,194;UBERON:0001948,2.27e-07,5;UBERON:0002315,2.27e-07,5;UBERON:0002619,3.01e-07,17|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388859798148567,0.419959264876088,1.43752564364972,0,0,0,0,0,0,0.809265843438391,2.11596391708813,0.633831403506179,0,0,0,0,0,0.898800331555214,0.768436610643109,0.829516898467821,0.810035629990144,1.05162480675691,2.85650984403804,1.32521124570968,0.734944795289724,0.383381884072945,0.919218786610021,3.30347642998166,1.91531007127782,1.68967186581868,1.05509030184155,1.37231465403614,0,0.837548997004143,0.56276261003168,1.22238598221448,1.47314292736834,0.569486723196412,0,0.454357159999104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8850203613211,0,0,0,0,0.299581278809645,0.915001205637253,0.879580464790051,1.21677024134594,0.255715457330331,0.83115217823824,4.38051410282946,0,0,0,0.631325567659422,0,0,0,0.150704817835715,0.204109497453984,0.384341160854549,0.281105173679186,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10289948564127,1.54356918568927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0.189709611372772,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491589944147214,0,0.144649058581512,0,0,0,0,1.60550589987792,5.27452589664914,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388076051348264,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608175645870493,0.102710957164827,0,0,0,0,0,0.201932899896295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,1.38097570952153,0,1.03111909406213,0,0.755393897389701,1.35004500046361,0,0.453142408984205,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0.25347929989024,0,0.187283014939765,0.192075457214608,0,0,0.115884325944855,0.192909220463705,0.412085900803307,0,0,0.177475806159338,0,0,0.376437521661322,0,0,0,0.271608227691724,0,0.237270036248348,0.0985044823755635,0,0.309873682371932,0,0.749431733813838,0,0,0,0,0.231867835620421|short_description=p5@Wscd1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=216881 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=Q80XH4 | |||
|association_with_transcript=0bp_to_ENSMUST00000021168_5end | |||
|cluster_id=chr11:71564182..71564193,+ | |||
|description=CAGE_peak_5_at_Wscd1_5end | |||
|id=chr11:71564182..71564193,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.54e-21!23;CL:0000337!1.54e-21!23;CL:0002319!1.39e-15!43;CL:0000221!4.98e-15!44;CL:0000133!4.98e-15!44;CL:0000540!6.99e-13!33;CL:0000047!6.99e-13!33;CL:0000031!6.99e-13!33;CL:0000404!6.99e-13!33;CL:0000055!3.37e-12!50;CL:0000393!6.89e-10!39;CL:0000211!6.89e-10!39;CL:0002609!2.88e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.06e-18,23;CL:0000337,7.06e-18,23;CL:0002610,1.37e-12,3;CL:0000540,6.98e-12,33;CL:0000047,6.98e-12,33;CL:0000031,6.98e-12,33;CL:0000404,6.98e-12,33;CL:0002319,1.96e-10,43;CL:0000221,3.78e-10,44;CL:0000133,3.78e-10,44;CL:0000393,9.24e-10,39;CL:0000211,9.24e-10,39;CL:0002611,1.38e-08,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.07e-30!75;UBERON:0001016!6.07e-30!75;UBERON:0001017!1.21e-29!73;UBERON:0005743!1.21e-29!73;UBERON:0001049!1.99e-24!52;UBERON:0005068!1.99e-24!52;UBERON:0006241!1.99e-24!52;UBERON:0007135!1.99e-24!52;UBERON:0004121!2.68e-24!102;UBERON:0000924!2.68e-24!102;UBERON:0006601!2.68e-24!102;UBERON:0000033!3.38e-24!63;UBERON:0000955!3.76e-24!50;UBERON:0006238!3.76e-24!50;UBERON:0002616!3.22e-23!49;UBERON:0002020!3.21e-22!34;UBERON:0002346!2.35e-21!71;UBERON:0003075!2.35e-21!71;UBERON:0007284!2.35e-21!71;UBERON:0003056!9.61e-21!49;UBERON:0002791!1.13e-18!29;UBERON:0003528!1.13e-18!29;UBERON:0001893!1.13e-18!29;UBERON:0003080!2.50e-18!40;UBERON:0002780!1.40e-17!39;UBERON:0001890!1.40e-17!39;UBERON:0006240!1.40e-17!39;UBERON:0007811!4.47e-17!86;UBERON:0000153!1.69e-14!94;UBERON:0000956!1.78e-12!21;UBERON:0001869!1.78e-12!21;UBERON:0000203!1.78e-12!21;UBERON:0002619!1.12e-08!17;UBERON:0002298!8.92e-08!6;UBERON:0002420!1.63e-07!8;UBERON:0007245!1.63e-07!8;UBERON:0010009!1.63e-07!8;UBERON:0010011!1.63e-07!8;UBERON:0000454!1.63e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.87e-27,54;UBERON:0001017,4.30e-26,73;UBERON:0001016,2.67e-25,75;UBERON:0001049,1.83e-22,52;UBERON:0005068,1.83e-22,52;UBERON:0006241,1.83e-22,52;UBERON:0007135,1.83e-22,52;UBERON:0004121,3.39e-19,95;UBERON:0000924,3.39e-19,95;UBERON:0006601,3.39e-19,95;UBERON:0002020,2.47e-18,34;UBERON:0002346,1.28e-17,64;UBERON:0003075,1.28e-17,64;UBERON:0007284,1.28e-17,64;UBERON:0002616,2.49e-15,46;UBERON:0003076,4.77e-15,12;UBERON:0003057,4.77e-15,12;UBERON:0010371,5.00e-15,73;UBERON:0000955,6.03e-15,47;UBERON:0006238,6.03e-15,47;UBERON:0003528,4.65e-13,29;UBERON:0002791,4.65e-13,29;UBERON:0001893,4.65e-13,29;UBERON:0004684,1.37e-12,3;UBERON:0002275,1.37e-12,3;UBERON:0002780,2.86e-11,39;UBERON:0001890,2.86e-11,39;UBERON:0006240,2.86e-11,39;UBERON:0010314,3.27e-11,92;UBERON:0003080,6.18e-11,40;UBERON:0002240,2.54e-10,6;UBERON:0005174,2.54e-10,6;UBERON:0001137,2.54e-10,6;UBERON:0000956,6.81e-10,21;UBERON:0001869,6.81e-10,21;UBERON:0000203,6.81e-10,21;UBERON:0001896,5.24e-09,2;UBERON:0002298,5.24e-09,2;UBERON:0005290,5.24e-09,2;UBERON:0010096,5.24e-09,2;UBERON:0002256,1.38e-08,2;UBERON:0003056,1.53e-08,49;UBERON:0000025,2.25e-08,114;UBERON:0004111,1.36e-07,122;UBERON:0011216,2.10e-07,194;UBERON:0001948,2.27e-07,5;UBERON:0002315,2.27e-07,5;UBERON:0002619,3.01e-07,17 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388859798148567,0.419959264876088,1.43752564364972,0,0,0,0,0,0,0.809265843438391,2.11596391708813,0.633831403506179,0,0,0,0,0,0.898800331555214,0.768436610643109,0.829516898467821,0.810035629990144,1.05162480675691,2.85650984403804,1.32521124570968,0.734944795289724,0.383381884072945,0.919218786610021,3.30347642998166,1.91531007127782,1.68967186581868,1.05509030184155,1.37231465403614,0,0.837548997004143,0.56276261003168,1.22238598221448,1.47314292736834,0.569486723196412,0,0.454357159999104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8850203613211,0,0,0,0,0.299581278809645,0.915001205637253,0.879580464790051,1.21677024134594,0.255715457330331,0.83115217823824,4.38051410282946,0,0,0,0.631325567659422,0,0,0,0.150704817835715,0.204109497453984,0.384341160854549,0.281105173679186,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10289948564127,1.54356918568927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0.189709611372772,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491589944147214,0,0.144649058581512,0,0,0,0,1.60550589987792,5.27452589664914,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388076051348264,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608175645870493,0.102710957164827,0,0,0,0,0,0.201932899896295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,1.38097570952153,0,1.03111909406213,0,0.755393897389701,1.35004500046361,0,0.453142408984205,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0.25347929989024,0,0.187283014939765,0.192075457214608,0,0,0.115884325944855,0.192909220463705,0.412085900803307,0,0,0.177475806159338,0,0,0.376437521661322,0,0,0,0.271608227691724,0,0.237270036248348,0.0985044823755635,0,0.309873682371932,0,0.749431733813838,0,0,0,0,0.231867835620421 | |||
|short_description=p5@Wscd1 | |||
}} |
Latest revision as of 15:23, 25 September 2015
Short description: | p5@Wscd1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Wscd1_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 0bp_to_ENSMUST00000021168_5end |
EntrezGene: | Wscd1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.06e-18 | 23 |
neuroblast (sensu Vertebrata) | 7.06e-18 | 23 |
raphe nuclei neuron | 1.37e-12 | 3 |
neuron | 6.98e-12 | 33 |
neuronal stem cell | 6.98e-12 | 33 |
neuroblast | 6.98e-12 | 33 |
electrically signaling cell | 6.98e-12 | 33 |
neural cell | 1.96e-10 | 43 |
ectodermal cell | 3.78e-10 | 44 |
neurectodermal cell | 3.78e-10 | 44 |
electrically responsive cell | 9.24e-10 | 39 |
electrically active cell | 9.24e-10 | 39 |
neuron of the dorsal spinal cord | 1.38e-08 | 2 |