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FFCP PHASE1:Mm9::chr8:86424346..86424387,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=330814
|EntrezGene=330814
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=D6RI60
|UniProt=D6RI60
|association_with_transcript=-84bp_to_ENSMUST00000124355_5end
|association_with_transcript=-84bp_to_ENSMUST00000124355_5end
|cluster_id=chr8:86424346..86424387,+
|description=CAGE_peak_6_at_Lphn1_5end
|description=CAGE_peak_6_at_Lphn1_5end
|id=chr8:86424346..86424387,+
|id=chr8:86424346..86424387,+
|ontology_enrichment_celltype=CL:0000540!6.24e-11!33;CL:0000047!6.24e-11!33;CL:0000031!6.24e-11!33;CL:0000404!6.24e-11!33;CL:0000221!2.87e-10!44;CL:0000133!2.87e-10!44;CL:0000117!6.47e-10!23;CL:0000337!6.47e-10!23;CL:0002319!8.00e-10!43;CL:0000393!2.93e-08!39;CL:0000211!2.93e-08!39;CL:0000055!2.77e-07!50
|ontology_enrichment_celltype=CL:0000540!6.24e-11!33;CL:0000047!6.24e-11!33;CL:0000031!6.24e-11!33;CL:0000404!6.24e-11!33;CL:0000221!2.87e-10!44;CL:0000133!2.87e-10!44;CL:0000117!6.47e-10!23;CL:0000337!6.47e-10!23;CL:0002319!8.00e-10!43;CL:0000393!2.93e-08!39;CL:0000211!2.93e-08!39;CL:0000055!2.77e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,3.14e-11,23;CL:0000337,3.14e-11,23;CL:0000221,5.64e-10,44;CL:0000133,5.64e-10,44;CL:0002319,3.29e-09,43;CL:0000540,5.12e-09,33;CL:0000047,5.12e-09,33;CL:0000031,5.12e-09,33;CL:0000404,5.12e-09,33;CL:0000393,5.02e-07,39;CL:0000211,5.02e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!2.35e-29!102;UBERON:0000924!2.35e-29!102;UBERON:0006601!2.35e-29!102;UBERON:0001017!6.23e-29!73;UBERON:0005743!6.23e-29!73;UBERON:0000073!4.70e-28!75;UBERON:0001016!4.70e-28!75;UBERON:0002346!5.30e-26!71;UBERON:0003075!5.30e-26!71;UBERON:0007284!5.30e-26!71;UBERON:0000033!1.30e-24!63;UBERON:0001049!6.77e-23!52;UBERON:0005068!6.77e-23!52;UBERON:0006241!6.77e-23!52;UBERON:0007135!6.77e-23!52;UBERON:0000955!4.25e-22!50;UBERON:0006238!4.25e-22!50;UBERON:0002616!1.78e-21!49;UBERON:0003056!4.33e-19!49;UBERON:0003080!3.89e-17!40;UBERON:0002780!1.57e-16!39;UBERON:0001890!1.57e-16!39;UBERON:0006240!1.57e-16!39;UBERON:0002020!2.81e-15!34;UBERON:0007811!1.24e-13!86;UBERON:0000153!3.94e-13!94;UBERON:0002791!1.74e-12!29;UBERON:0003528!1.74e-12!29;UBERON:0001893!1.74e-12!29;UBERON:0002021!1.80e-08!10;UBERON:0000411!1.80e-08!10;UBERON:0001950!1.80e-08!10;UBERON:0000956!2.28e-08!21;UBERON:0001869!2.28e-08!21;UBERON:0000203!2.28e-08!21;UBERON:0002619!1.98e-07!17;UBERON:0004111!9.37e-07!122
|ontology_enrichment_uberon=UBERON:0004121!2.35e-29!102;UBERON:0000924!2.35e-29!102;UBERON:0006601!2.35e-29!102;UBERON:0001017!6.23e-29!73;UBERON:0005743!6.23e-29!73;UBERON:0000073!4.70e-28!75;UBERON:0001016!4.70e-28!75;UBERON:0002346!5.30e-26!71;UBERON:0003075!5.30e-26!71;UBERON:0007284!5.30e-26!71;UBERON:0000033!1.30e-24!63;UBERON:0001049!6.77e-23!52;UBERON:0005068!6.77e-23!52;UBERON:0006241!6.77e-23!52;UBERON:0007135!6.77e-23!52;UBERON:0000955!4.25e-22!50;UBERON:0006238!4.25e-22!50;UBERON:0002616!1.78e-21!49;UBERON:0003056!4.33e-19!49;UBERON:0003080!3.89e-17!40;UBERON:0002780!1.57e-16!39;UBERON:0001890!1.57e-16!39;UBERON:0006240!1.57e-16!39;UBERON:0002020!2.81e-15!34;UBERON:0007811!1.24e-13!86;UBERON:0000153!3.94e-13!94;UBERON:0002791!1.74e-12!29;UBERON:0003528!1.74e-12!29;UBERON:0001893!1.74e-12!29;UBERON:0002021!1.80e-08!10;UBERON:0000411!1.80e-08!10;UBERON:0001950!1.80e-08!10;UBERON:0000956!2.28e-08!21;UBERON:0001869!2.28e-08!21;UBERON:0000203!2.28e-08!21;UBERON:0002619!1.98e-07!17;UBERON:0004111!9.37e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.01e-41,73;UBERON:0000073,1.99e-40,54;UBERON:0001016,2.75e-40,75;UBERON:0001049,7.09e-37,52;UBERON:0005068,7.09e-37,52;UBERON:0006241,7.09e-37,52;UBERON:0007135,7.09e-37,52;UBERON:0004121,2.95e-32,95;UBERON:0000924,2.95e-32,95;UBERON:0006601,2.95e-32,95;UBERON:0000955,4.80e-32,47;UBERON:0006238,4.80e-32,47;UBERON:0002616,1.00e-30,46;UBERON:0002346,1.20e-29,64;UBERON:0003075,1.20e-29,64;UBERON:0007284,1.20e-29,64;UBERON:0010371,3.19e-26,73;UBERON:0003080,5.98e-25,40;UBERON:0002780,1.14e-23,39;UBERON:0001890,1.14e-23,39;UBERON:0006240,1.14e-23,39;UBERON:0002020,2.55e-22,34;UBERON:0003056,2.07e-20,49;UBERON:0010314,8.87e-20,92;UBERON:0003528,5.78e-18,29;UBERON:0002791,5.78e-18,29;UBERON:0001893,5.78e-18,29;UBERON:0002021,6.35e-18,10;UBERON:0000411,6.35e-18,10;UBERON:0001950,6.35e-18,10;UBERON:0002619,1.52e-13,17;UBERON:0000956,2.38e-12,21;UBERON:0001869,2.38e-12,21;UBERON:0000203,2.38e-12,21;UBERON:0004111,2.42e-12,122;UBERON:0000025,3.40e-12,114;UBERON:0003076,3.58e-12,12;UBERON:0003057,3.58e-12,12;UBERON:0011216,2.99e-10,194;UBERON:0002950,3.53e-07,4;UBERON:0001891,3.53e-07,4;UBERON:0009616,3.53e-07,4;UBERON:0010286,3.53e-07,4;UBERON:0002240,6.51e-07,6;UBERON:0005174,6.51e-07,6;UBERON:0001137,6.51e-07,6;UBERON:0002420,6.90e-07,8;UBERON:0007245,6.90e-07,8;UBERON:0010009,6.90e-07,8;UBERON:0010011,6.90e-07,8;UBERON:0000454,6.90e-07,8;UBERON:0004733,9.00e-07,6;UBERON:0004732,9.00e-07,6;UBERON:0002028,9.00e-07,6;UBERON:0007277,9.00e-07,6
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,1.02730780935303,0.319088635981346,0,0,0,0.202475267389826,0,0,0.137114433605739,0,0.595303031057488,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,3.9119567217402,0,0,0.388859798148567,0.279972843250725,0,0,0,0.336093799142464,0.257259436035947,0,0,1.21389876515759,1.05798195854407,0.633831403506179,0,0,0.449949858640699,0.988866362566974,0,1.49800055259202,2.30530983192933,0.518448061542388,0.945041568321835,0.210324961351382,4.57041575046086,2.20868540951614,0.734944795289724,0.383381884072945,0,4.40463523997555,4.34136949489638,6.14426133024974,1.45074916503213,0.823388792421687,2.6045668527838,3.62937898701795,1.68828783009504,3.97275444219706,3.24091444021034,1.42371680799103,0.745597783301202,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,1.26759077799012,0,0,0,0,0,0,0,0.258937883647172,0.593768556259299,0.520455980298408,0.608930956624282,1.15307748628029,0.150722640552623,0.470354828542819,0.502666365318702,0,0.722996784599558,0,0.161766849947409,0,0,0,1.46390398505774,2.09446706813455,0.255457055208591,0,0,0,2.09706895166752,0.915001205637253,1.25654352112864,4.51943232499919,2.55715457330331,1.87009240103604,3.73154905055843,0.509196819251581,0.248813941220186,0.252722758433675,0.420883711772948,0.390361328888111,0.689706313300419,1.0803727788321,0.30140963567143,0.748401490664606,0.512454881139399,0.655912071918102,0.517406741478031,0.431135985865684,0.189106080167819,0.527853372491847,0,0.278047249225598,0.348252166522167,0,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0.196764231747404,0,0.465067889500816,0,0.233530684734339,0,0,0.0810688095458557,0.292399974850665,0,0.134206418760372,3.78521907415429,1.44066457330998,0,0,0.213288250535234,0,0.644337306610467,0.201683524623343,0,0.380451252225118,0,0,0,0,0.19496408711912,0,0,0,0.379335801906163,0.456994050438915,0,0.203651327845314,0,0.280543279561274,0.316182685621286,0,0,0,0,0,0,0,0.405720242777006,0,0.25462585178142,0,0.162135226775035,0,1.43768206527355,0,0,0,0,0,0,0.37898282354097,0.488894929326078,0.169745085775188,0,0.167506257441816,0.238043640886014,0.390267295715598,0.788175720530955,0.221464689648775,0.318909537314974,0,0,0,0,0,0,0,2.40825884981688,1.87538698547525,0,0,0,0.390438744296638,0.646270193198397,0.238968797952552,0.445597348164788,0.566153061577665,0.404810701674894,1.16902343164525,1.58115111178609,1.92792789853084,1.13552068166615,0.35613120733451,0.651547837414304,0.164970122972535,0,0.485561272309963,0.302323556964751,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,0.680879211507576,0.18006109403131,1.16422815404479,0.643011105094777,1.24138163549592,1.24858172321449,1.48094118541909,2.13125464380219,0,0,0,0.49465875882444,0.484393280087717,0.120625849856312,0,0.164140899745061,0,2.03967832211561,0,0,0,0,0,0.228778173206523,0,0,0,0,0.474503990371703,0.609958401380546,0.216010681643603,0.418176592028937,0.218362563746178,0,0.330613822901344,0,0,0.621339313086926,0.56369293868419,0.299033092087958,0.496375471371293,0,0.258319646955462,0.168956125490778,0.469428954583016,1.0416350787516,0.629156066554265,0.241584120826006,0.288030006257865,0,0,0,0,0,0.198681354781265,0,0.147689527174577,0,0,0.201652370273681,0.0974578807397524,0.288635524920988,0.116876902181569,0,0,0,0,0,0,0.549454872801795,0.214368379079066,1.00314420807073,3.3885110557024,5.06357760157895,4.58316410751517,8.07709957015332,6.16574267793578,6.7985450765073,3.37511250115903,3.15224842256954,4.53142408984205,5.1776031175182,0.207574695168353,0.798049746802062,0.512200817262403,0.486213434136588,0.838452650511929,0.183843508450014,0.222246727801615,0.412070114477788,0.64183841918363,0,0,0.754505365544305,0.37456602987953,0.448176066834085,0.459483751644906,0.476293691283074,0.115884325944855,0.964546102318525,0.412085900803307,0.441596760403192,1.02860775715625,0.354951612318675,0.715308569841963,0.872078499793971,0.564656282491984,0.169229215783353,0,0.526139422875686,0.407412341537585,0.561142271657738,0.355905054372522,0.394017929502254,0.409231043169689,0.154936841185966,0.192906610981141,0.249810577937946,0.233931608445408,1.28922632428979,0.191288332068843,0.220591419119515,0.695603506861264
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|short_description=p6@Lphn1
|short_description=p6@Lphn1
}}
}}

Latest revision as of 20:53, 25 September 2015

Short description:p6@Lphn1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Lphn1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -84bp_to_ENSMUST00000124355_5end
EntrezGene:Lphn1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Lphn1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.32
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.34
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.14
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.45
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.82
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.97
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I22.09
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.10
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F11.26
cortex, adult.CNhs10473.12-14D54.52
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F21.87
diencephalon, neonate N30.CNhs11201.1388-42B23.73
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.75
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E83.79
hippocampus, neonate N00.CNhs11228.627-43G11.44
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.41
medulla oblongata, neonate N30.CNhs11200.1396-42A31.88
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.04
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.08
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.18
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.14e-1123
neuroblast (sensu Vertebrata)3.14e-1123
ectodermal cell5.64e-1044
neurectodermal cell5.64e-1044
neural cell3.29e-0943
neuron5.12e-0933
neuronal stem cell5.12e-0933
neuroblast5.12e-0933
electrically signaling cell5.12e-0933
electrically responsive cell5.02e-0739
electrically active cell5.02e-0739

Uber anatomy
Ontology termp-valuen
central nervous system1.01e-4173
regional part of nervous system1.99e-4054
nervous system2.75e-4075
neural tube7.09e-3752
neural rod7.09e-3752
future spinal cord7.09e-3752
neural keel7.09e-3752
ectoderm-derived structure2.95e-3295
ectoderm2.95e-3295
presumptive ectoderm2.95e-3295
brain4.80e-3247
future brain4.80e-3247
regional part of brain1.00e-3046
neurectoderm1.20e-2964
neural plate1.20e-2964
presumptive neural plate1.20e-2964
ecto-epithelium3.19e-2673
anterior neural tube5.98e-2540
regional part of forebrain1.14e-2339
forebrain1.14e-2339
future forebrain1.14e-2339
gray matter2.55e-2234
pre-chordal neural plate2.07e-2049
structure with developmental contribution from neural crest8.87e-2092
brain grey matter5.78e-1829
regional part of telencephalon5.78e-1829
telencephalon5.78e-1829
occipital lobe6.35e-1810
visual cortex6.35e-1810
neocortex6.35e-1810
regional part of cerebral cortex1.52e-1317
cerebral cortex2.38e-1221
cerebral hemisphere2.38e-1221
pallium2.38e-1221
anatomical conduit2.42e-12122
tube3.40e-12114
posterior neural tube3.58e-1212
chordal neural plate3.58e-1212
organ system subdivision2.99e-10194
regional part of midbrain3.53e-074
midbrain3.53e-074
presumptive midbrain3.53e-074
midbrain neural tube3.53e-074
spinal cord6.51e-076
dorsal region element6.51e-076
dorsum6.51e-076
basal ganglion6.90e-078
nuclear complex of neuraxis6.90e-078
aggregate regional part of brain6.90e-078
collection of basal ganglia6.90e-078
cerebral subcortex6.90e-078
segmental subdivision of hindbrain9.00e-076
segmental subdivision of nervous system9.00e-076
hindbrain9.00e-076
presumptive hindbrain9.00e-076
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