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FFCP PHASE1:Mm9::chr5:27588456..27588520,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=13483
|EntrezGene=13483
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q80VM5,D6RFR3
|UniProt=Q80VM5,D6RFR3
|association_with_transcript=0bp_to_ENSMUST00000101471,ENSMUST00000148039,NM_001136060,uc008wto.2_5end
|association_with_transcript=0bp_to_ENSMUST00000101471,ENSMUST00000148039,NM_001136060,uc008wto.2_5end
|cluster_id=chr5:27588456..27588520,+
|description=CAGE_peak_1_at_Dpp6_5end
|description=CAGE_peak_1_at_Dpp6_5end
|id=chr5:27588456..27588520,+
|id=chr5:27588456..27588520,+
|ontology_enrichment_celltype=CL:0000117!1.35e-14!23;CL:0000337!1.35e-14!23;CL:0000540!4.78e-11!33;CL:0000047!4.78e-11!33;CL:0000031!4.78e-11!33;CL:0000404!4.78e-11!33;CL:0002319!8.70e-08!43;CL:0000221!9.66e-08!44;CL:0000133!9.66e-08!44;CL:0000393!2.89e-07!39;CL:0000211!2.89e-07!39
|ontology_enrichment_celltype=CL:0000117!1.35e-14!23;CL:0000337!1.35e-14!23;CL:0000540!4.78e-11!33;CL:0000047!4.78e-11!33;CL:0000031!4.78e-11!33;CL:0000404!4.78e-11!33;CL:0002319!8.70e-08!43;CL:0000221!9.66e-08!44;CL:0000133!9.66e-08!44;CL:0000393!2.89e-07!39;CL:0000211!2.89e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,9.58e-17,23;CL:0000337,9.58e-17,23;CL:0000540,6.62e-10,33;CL:0000047,6.62e-10,33;CL:0000031,6.62e-10,33;CL:0000404,6.62e-10,33;CL:0000393,6.36e-07,39;CL:0000211,6.36e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!6.61e-28!71;UBERON:0003075!6.61e-28!71;UBERON:0007284!6.61e-28!71;UBERON:0001017!3.49e-27!73;UBERON:0005743!3.49e-27!73;UBERON:0000033!4.15e-26!63;UBERON:0001049!5.28e-26!52;UBERON:0005068!5.28e-26!52;UBERON:0006241!5.28e-26!52;UBERON:0007135!5.28e-26!52;UBERON:0000073!1.72e-25!75;UBERON:0001016!1.72e-25!75;UBERON:0000955!7.73e-25!50;UBERON:0006238!7.73e-25!50;UBERON:0002616!3.01e-24!49;UBERON:0003056!8.23e-24!49;UBERON:0004121!1.59e-21!102;UBERON:0000924!1.59e-21!102;UBERON:0006601!1.59e-21!102;UBERON:0003080!2.01e-20!40;UBERON:0002780!1.20e-19!39;UBERON:0001890!1.20e-19!39;UBERON:0006240!1.20e-19!39;UBERON:0002020!2.84e-18!34;UBERON:0000153!1.86e-17!94;UBERON:0007811!3.90e-17!86;UBERON:0002791!5.95e-15!29;UBERON:0003528!5.95e-15!29;UBERON:0001893!5.95e-15!29;UBERON:0000956!7.07e-10!21;UBERON:0001869!7.07e-10!21;UBERON:0000203!7.07e-10!21;UBERON:0002619!3.69e-08!17;UBERON:0002021!1.80e-07!10;UBERON:0000411!1.80e-07!10;UBERON:0001950!1.80e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0002346,7.68e-33,64;UBERON:0003075,7.68e-33,64;UBERON:0007284,7.68e-33,64;UBERON:0000073,1.34e-31,54;UBERON:0001049,1.92e-29,52;UBERON:0005068,1.92e-29,52;UBERON:0006241,1.92e-29,52;UBERON:0007135,1.92e-29,52;UBERON:0001017,3.26e-27,73;UBERON:0003056,3.43e-27,49;UBERON:0001016,8.83e-26,75;UBERON:0010371,1.58e-25,73;UBERON:0000955,3.17e-25,47;UBERON:0006238,3.17e-25,47;UBERON:0002616,1.48e-24,46;UBERON:0004121,2.12e-23,95;UBERON:0000924,2.12e-23,95;UBERON:0006601,2.12e-23,95;UBERON:0003080,3.08e-23,40;UBERON:0002780,2.46e-22,39;UBERON:0001890,2.46e-22,39;UBERON:0006240,2.46e-22,39;UBERON:0002020,1.00e-20,34;UBERON:0003528,7.26e-17,29;UBERON:0002791,7.26e-17,29;UBERON:0001893,7.26e-17,29;UBERON:0010314,9.98e-16,92;UBERON:0000956,5.62e-11,21;UBERON:0001869,5.62e-11,21;UBERON:0000203,5.62e-11,21;UBERON:0002619,5.56e-09,17;UBERON:0002021,1.89e-08,10;UBERON:0000411,1.89e-08,10;UBERON:0001950,1.89e-08,10;UBERON:0002420,2.63e-07,8;UBERON:0007245,2.63e-07,8;UBERON:0010009,2.63e-07,8;UBERON:0010011,2.63e-07,8;UBERON:0000454,2.63e-07,8
|phase1_expression=0.640595388419176,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.2667532635669,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0.55994568650145,0,0,0,0,0,0,0,35.4053806504296,45.4932242173948,32.3254015788151,0,0,0,0,0,2.99600110518405,3.07374644257244,6.42875596312561,6.61529097825284,6.09942387919008,60.8436596780102,57.4258206474195,8.94182834269164,8.62609239164127,11.9498442259303,88.092704799511,99.7238110445316,93.8535918195648,44.5775652528055,41.6268778390964,36.4639359389732,85.1508146954212,65.8432253737066,68.1480185084573,60.3988600221019,56.2368139156457,36.9070902734095,0,0,0,0,0,0,0,0,3.23022166303029,0,0,0,0.563373679106722,0,0,0,0,0,0,1.1418387971906,0,0.593768556259299,0.693941307064543,1.21786191324856,0.691846491768175,0.452167921657868,0.823120949949934,0,0,0,0,0.485300549842228,0,0,0,59.1417209963325,82.5220024845013,0,0,0,0,77.741341851103,76.8601012735293,30.5340075634261,58.2311472644126,53.9559614966997,72.5180275512865,69.4392605930003,7.33243419722277,2.36373244159177,0,6.31325567659422,2.34216797332867,3.67843367093557,4.86167750474443,7.53524089178575,7.89223390155403,9.22418786050918,9.18276900685342,25.0942269616845,1.07783996466421,2.64748512234947,3.16712023495108,2.19195732427575,1.39023624612799,1.0447564995665,0.61734640922383,4.97585667046233,0,0,0,0.207125772535502,0.469052119962192,0.180062061461015,0,0,0.308534225774757,0,0,0,0,0,0,0,0,0,38.6933505357994,12.5543627102727,0,0,2.55945900642281,1.85789337488351,1.15980715189884,1.00841762311671,1.11189021922435,0.380451252225118,0,0,0,0.994782360205754,0.38992817423824,0,0,0,1.89667900953082,0.913988100877831,3.38123207019241,4.07302655690629,2.71533482034676,2.31448205638051,0.442655759869801,0.590440591918409,0,0.246794327843601,0,0.333690211432188,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.37898282354097,0.325929952884052,0.169745085775188,0,0.335012514883631,0,0,0,0,0,0,0,0,0,0,0,0,55.8716053157516,52.510835593307,0,0,0.94652465824877,1.17131623288992,2.15423397732799,0.238968797952552,0,0.283076530788832,0.404810701674894,0.876767573733936,0,30.8468463764935,0.709700426041343,9.79360820169904,7.32991317091092,2.63952196756057,0,1.45668381692989,0.604647113929502,0.188605079755898,0.295301892880773,0.614870295887855,0.258428293168221,0,0,0.316036757935816,0,0,20.4263763452273,2.34079422240703,3.36332577835162,9.85950361145325,18.0887038315119,15.161349496176,10.2020392773315,10.656273219011,0,0,1.32317038832977,0,0,0,0,0,0,49.1377050327851,0,0,0,0,0,0,0,0,0,0,1.58167996790568,1.01659733563424,1.08005340821801,1.25452977608681,0.436725127492355,0.404593039154462,0.41326727862668,0,0,0,0,0.448549638131936,0.827292452285488,2.72231663681667,1.29159823477731,0.844780627453891,1.29092962510329,2.3436789271911,0.104859344425711,0,0,4.4241556887945,0,0.205421914329655,0.129920822977795,0,0.198681354781265,0.480781798079875,0.147689527174577,0.504832249740738,0.762068066549998,0.705783295957884,0.974578807397524,1.15454209968395,1.5193997283604,0,0,0,0,1.9318959403219,0,2.01466786693992,1.07184189539533,2.50786052017682,38.4031252979605,35.9053684475598,41.2484769676366,40.9010573977977,50.6961064630275,60.431511791176,56.7018900194717,57.6411140127002,53.9239466691203,65.2377992807293,1.14166082342594,5.1873233542134,6.31714341290296,4.86213434136588,3.77303692730368,2.38996560985018,4.22268782823069,5.56294654545014,4.49286893428541,5.81203587056734,4.81610669791456,5.47016390019621,5.05664140337365,5.69823856403337,4.53740204749345,5.23923060411381,6.2577536010222,5.98018583437486,4.12085900803307,6.18235464564469,5.14303878578123,5.14679837862079,5.96090474868302,5.66851024866081,4.89368778159719,6.26148098398406,3.65855945745545,2.63069711437843,5.70377278152619,2.80571135828869,4.1522256343461,4.23569274214923,4.91077251803627,5.42278944150881,6.75173138433995,9.74261253957989,5.84829021113521,3.65280791882107,2.29545998482612,1.76473135295612,1.62307484934295
|phase1_expression=0.640595388419176,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.2667532635669,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0.55994568650145,0,0,0,0,0,0,0,35.4053806504296,45.4932242173948,32.3254015788151,0,0,0,0,0,2.99600110518405,3.07374644257244,6.42875596312561,6.61529097825284,6.09942387919008,60.8436596780102,57.4258206474195,8.94182834269164,8.62609239164127,11.9498442259303,88.092704799511,99.7238110445316,93.8535918195648,44.5775652528055,41.6268778390964,36.4639359389732,85.1508146954212,65.8432253737066,68.1480185084573,60.3988600221019,56.2368139156457,36.9070902734095,0,0,0,0,0,0,0,0,3.23022166303029,0,0,0,0.563373679106722,0,0,0,0,0,0,1.1418387971906,0,0.593768556259299,0.693941307064543,1.21786191324856,0.691846491768175,0.452167921657868,0.823120949949934,0,0,0,0,0.485300549842228,0,0,0,59.1417209963325,82.5220024845013,0,0,0,0,77.741341851103,76.8601012735293,30.5340075634261,58.2311472644126,53.9559614966997,72.5180275512865,69.4392605930003,7.33243419722277,2.36373244159177,0,6.31325567659422,2.34216797332867,3.67843367093557,4.86167750474443,7.53524089178575,7.89223390155403,9.22418786050918,9.18276900685342,25.0942269616845,1.07783996466421,2.64748512234947,3.16712023495108,2.19195732427575,1.39023624612799,1.0447564995665,0.61734640922383,4.97585667046233,0,0,0,0.207125772535502,0.469052119962192,0.180062061461015,0,0,0.308534225774757,0,0,0,0,0,0,0,0,0,38.6933505357994,12.5543627102727,0,0,2.55945900642281,1.85789337488351,1.15980715189884,1.00841762311671,1.11189021922435,0.380451252225118,0,0,0,0.994782360205754,0.38992817423824,0,0,0,1.89667900953082,0.913988100877831,3.38123207019241,4.07302655690629,2.71533482034676,2.31448205638051,0.442655759869801,0.590440591918409,0,0.246794327843601,0,0.333690211432188,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.37898282354097,0.325929952884052,0.169745085775188,0,0.335012514883631,0,0,0,0,0,0,0,0,0,0,0,0,55.8716053157516,52.510835593307,0,0,0.94652465824877,1.17131623288992,2.15423397732799,0.238968797952552,0,0.283076530788832,0.404810701674894,0.876767573733936,0,30.8468463764935,0.709700426041343,9.79360820169904,7.32991317091092,2.63952196756057,0,1.45668381692989,0.604647113929502,0.188605079755898,0.295301892880773,0.614870295887855,0.258428293168221,0,0,0.316036757935816,0,0,20.4263763452273,2.34079422240703,3.36332577835162,9.85950361145325,18.0887038315119,15.161349496176,10.2020392773315,10.656273219011,0,0,1.32317038832977,0,0,0,0,0,0,49.1377050327851,0,0,0,0,0,0,0,0,0,0,1.58167996790568,1.01659733563424,1.08005340821801,1.25452977608681,0.436725127492355,0.404593039154462,0.41326727862668,0,0,0,0,0.448549638131936,0.827292452285488,2.72231663681667,1.29159823477731,0.844780627453891,1.29092962510329,2.3436789271911,0.104859344425711,0,0,4.4241556887945,0,0.205421914329655,0.129920822977795,0,0.198681354781265,0.480781798079875,0.147689527174577,0.504832249740738,0.762068066549998,0.705783295957884,0.974578807397524,1.15454209968395,1.5193997283604,0,0,0,0,1.9318959403219,0,2.01466786693992,1.07184189539533,2.50786052017682,38.4031252979605,35.9053684475598,41.2484769676366,40.9010573977977,50.6961064630275,60.431511791176,56.7018900194717,57.6411140127002,53.9239466691203,65.2377992807293,1.14166082342594,5.1873233542134,6.31714341290296,4.86213434136588,3.77303692730368,2.38996560985018,4.22268782823069,5.56294654545014,4.49286893428541,5.81203587056734,4.81610669791456,5.47016390019621,5.05664140337365,5.69823856403337,4.53740204749345,5.23923060411381,6.2577536010222,5.98018583437486,4.12085900803307,6.18235464564469,5.14303878578123,5.14679837862079,5.96090474868302,5.66851024866081,4.89368778159719,6.26148098398406,3.65855945745545,2.63069711437843,5.70377278152619,2.80571135828869,4.1522256343461,4.23569274214923,4.91077251803627,5.42278944150881,6.75173138433995,9.74261253957989,5.84829021113521,3.65280791882107,2.29545998482612,1.76473135295612,1.62307484934295
|short_description=p1@Dpp6
|short_description=p1@Dpp6
}}
}}

Latest revision as of 21:17, 25 September 2015

Short description:p1@Dpp6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Dpp6_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000101471, ENSMUST00000148039, NM_001136060, uc008wto.2_5end
EntrezGene:Dpp6
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Dpp6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A313.27
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C335.41
Mouse Granule cells, donor2.CNhs12357.11731-123E345.49
Mouse Granule cells, donor3.CNhs12108.11636-122C732.33
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.00
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.43
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F160.84
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D557.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.94
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.63
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.95
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D388.09
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F399.72
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D793.85
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D444.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F441.63
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D836.46
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E485.15
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E565.84
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I668.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D660.40
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F656.24
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E136.91
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.23
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B259.14
cerebellum, neonate N30.CNhs11135.1395-42I282.52
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A477.74
corpus striatum, adult.CNhs10487.19-21D876.86
corpus striatum, neonate N00.CNhs11226.630-43F130.53
cortex, adult.CNhs10473.12-14D558.23
cortex, neonate N30.CNhs11107.1392-42F253.96
diencephalon, adult.CNhs10482.20-12F272.52
diencephalon, neonate N30.CNhs11201.1388-42B269.44
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B17.33
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.36
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G46.31
eyeball, embryo E12.CNhs11016.345-16C62.34
eyeball, embryo E14.CNhs10521.399-16E23.68
eyeball, embryo E15.CNhs10593.426-16C94.86
eyeball, embryo E17.CNhs11023.1261-18D47.54
eyeball, neonate N00.CNhs11207.633-15C67.89
eyeball, neonate N01.CNhs11140.1532-43E79.22
eyeball, neonate N02.CNhs11205.1551-44G89.18
eyeball, neonate N16.CNhs11188.777-19A225.09
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H22.65
forelimb, embryo E13.CNhs10589.384-1E23.17
forelimb, embryo E14.CNhs10577.413-26A82.19
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I64.98
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E838.69
hippocampus, neonate N00.CNhs11228.627-43G112.55
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I52.56
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I91.90
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I24.07
kidney, embryo E18.CNhs11001.1288-20C72.72
kidney, neonate N00.CNhs11214.646-21G72.31
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C255.87
medulla oblongata, neonate N30.CNhs11200.1396-42A352.51
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I930.85
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H79.79
ovary, neonate N00.CNhs11217.1299-22I47.33
oviduct, adult pregnant day01.CNhs10500.988-6G62.64
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G820.43
pituitary gland, embryo E12.CNhs11018.346-16E62.34
pituitary gland, embryo E13.CNhs11009.370-44C73.36
pituitary gland, embryo E14.CNhs11037.398-44A59.86
pituitary gland, embryo E15.CNhs10592.427-16B918.09
pituitary gland, embryo E16.CNhs11036.449-43F615.16
pituitary gland, embryo E17.CNhs11039.1265-44F510.20
pituitary gland, neonate N00.CNhs11190.1308-22E910.66
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C949.14
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.58
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G52.72
testis, embryo E17.CNhs11029.486-18I51.29
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B71.29
testis, neonate N07.CNhs11222.726-26I42.34
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B54.42
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.76
thymus, neonate N10.CNhs11194.748-24E40.71
thymus, neonate N20.CNhs11186.820-7A20.97
thymus, neonate N25.CNhs11125.1362-25G71.15
thymus, neonate N30.CNhs11132.1393-42G21.52
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.93
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E52.01
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A138.40
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A235.91
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A341.25
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D740.90
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A450.70
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A560.43
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A656.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A757.64
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A853.92
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A965.24
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C95.19
whole body, embryo E13.CNhs10512.372-23H26.32
whole body, embryo E14.5.CNhs10578.420-27D24.86
whole body, embryo E14.CNhs10519.395-14B13.77
whole body, embryo E16.CNhs10514.453-14F22.39
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.47
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.06
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.54
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.26
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.98
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.14
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.15
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.96
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.67
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.89
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.26
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.66
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.70
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.24
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.91
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.42
whole body, embryo E17.5.CNhs10513.490-9F96.75
whole body, embryo E17.CNhs10517.475-3I59.74
whole body, embryo E18.CNhs10516.493-3B35.85
whole body, neonate N00.CNhs10525.657-19C23.65
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)9.58e-1723
neuroblast (sensu Vertebrata)9.58e-1723
neuron6.62e-1033
neuronal stem cell6.62e-1033
neuroblast6.62e-1033
electrically signaling cell6.62e-1033
electrically responsive cell6.36e-0739
electrically active cell6.36e-0739

Uber anatomy
Ontology termp-valuen
neurectoderm7.68e-3364
neural plate7.68e-3364
presumptive neural plate7.68e-3364
regional part of nervous system1.34e-3154
neural tube1.92e-2952
neural rod1.92e-2952
future spinal cord1.92e-2952
neural keel1.92e-2952
central nervous system3.26e-2773
pre-chordal neural plate3.43e-2749
nervous system8.83e-2675
ecto-epithelium1.58e-2573
brain3.17e-2547
future brain3.17e-2547
regional part of brain1.48e-2446
ectoderm-derived structure2.12e-2395
ectoderm2.12e-2395
presumptive ectoderm2.12e-2395
anterior neural tube3.08e-2340
regional part of forebrain2.46e-2239
forebrain2.46e-2239
future forebrain2.46e-2239
gray matter1.00e-2034
brain grey matter7.26e-1729
regional part of telencephalon7.26e-1729
telencephalon7.26e-1729
structure with developmental contribution from neural crest9.98e-1692
cerebral cortex5.62e-1121
cerebral hemisphere5.62e-1121
pallium5.62e-1121
regional part of cerebral cortex5.56e-0917
occipital lobe1.89e-0810
visual cortex1.89e-0810
neocortex1.89e-0810
basal ganglion2.63e-078
nuclear complex of neuraxis2.63e-078
aggregate regional part of brain2.63e-078
collection of basal ganglia2.63e-078
cerebral subcortex2.63e-078
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