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FFCP PHASE1:Mm9::chr19:4712071..4712111,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr19:4712071..4712111,+
|DHSsupport=NA
|short_description=p3@Spnb3
|DPIdataset=NA
|description=CAGE_peak_3_at_Spnb3_5end
|association_with_transcript=-296bp_to_uc008gao.1_5end
|EntrezGene=20743
|EntrezGene=20743
|HGNC=
|HGNC=
|MCL_coexpression_id=367
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-296bp_to_uc008gao.1_5end
|cluster_id=chr19:4712071..4712111,+
|description=CAGE_peak_3_at_Spnb3_5end
|id=chr19:4712071..4712111,+
|ontology_enrichment_celltype=CL:0000117!9.34e-18!23;CL:0000337!9.34e-18!23;CL:0000540!1.39e-16!33;CL:0000047!1.39e-16!33;CL:0000031!1.39e-16!33;CL:0000404!1.39e-16!33;CL:0000393!8.84e-12!39;CL:0000211!8.84e-12!39;CL:0000221!2.28e-11!44;CL:0000133!2.28e-11!44;CL:0002319!3.32e-11!43;CL:0000055!9.50e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000117,5.74e-28,23;CL:0000337,5.74e-28,23;CL:0000540,5.36e-17,33;CL:0000047,5.36e-17,33;CL:0000031,5.36e-17,33;CL:0000404,5.36e-17,33;CL:0000393,3.51e-13,39;CL:0000211,3.51e-13,39;CL:0002319,2.97e-11,43;CL:0000221,7.86e-11,44;CL:0000133,7.86e-11,44;CL:0002609,4.60e-09,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!4.30e-29!102;UBERON:0000924!4.30e-29!102;UBERON:0006601!4.30e-29!102;UBERON:0002346!1.73e-28!71;UBERON:0003075!1.73e-28!71;UBERON:0007284!1.73e-28!71;UBERON:0001017!1.92e-27!73;UBERON:0005743!1.92e-27!73;UBERON:0000073!2.41e-27!75;UBERON:0001016!2.41e-27!75;UBERON:0000033!6.96e-27!63;UBERON:0003056!1.53e-24!49;UBERON:0001049!2.60e-24!52;UBERON:0005068!2.60e-24!52;UBERON:0006241!2.60e-24!52;UBERON:0007135!2.60e-24!52;UBERON:0000955!8.51e-23!50;UBERON:0006238!8.51e-23!50;UBERON:0002616!2.65e-22!49;UBERON:0003080!7.00e-19!40;UBERON:0002020!2.06e-18!34;UBERON:0002780!3.67e-18!39;UBERON:0001890!3.67e-18!39;UBERON:0006240!3.67e-18!39;UBERON:0002791!4.78e-15!29;UBERON:0003528!4.78e-15!29;UBERON:0001893!4.78e-15!29;UBERON:0007811!7.15e-14!86;UBERON:0000153!3.29e-12!94;UBERON:0000956!4.85e-10!21;UBERON:0001869!4.85e-10!21;UBERON:0000203!4.85e-10!21;UBERON:0002619!2.37e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.33e-39,64;UBERON:0003075,1.33e-39,64;UBERON:0007284,1.33e-39,64;UBERON:0000073,9.74e-37,54;UBERON:0001049,3.05e-34,52;UBERON:0005068,3.05e-34,52;UBERON:0006241,3.05e-34,52;UBERON:0007135,3.05e-34,52;UBERON:0010371,9.92e-33,73;UBERON:0003056,3.66e-32,49;UBERON:0004121,1.25e-31,95;UBERON:0000924,1.25e-31,95;UBERON:0006601,1.25e-31,95;UBERON:0001017,1.93e-31,73;UBERON:0001016,3.50e-30,75;UBERON:0002020,1.69e-28,34;UBERON:0000955,2.40e-28,47;UBERON:0006238,2.40e-28,47;UBERON:0002616,1.42e-27,46;UBERON:0003080,1.30e-24,40;UBERON:0002780,1.70e-23,39;UBERON:0001890,1.70e-23,39;UBERON:0006240,1.70e-23,39;UBERON:0003528,5.11e-23,29;UBERON:0002791,5.11e-23,29;UBERON:0001893,5.11e-23,29;UBERON:0010314,1.07e-22,92;UBERON:0000956,6.82e-15,21;UBERON:0001869,6.82e-15,21;UBERON:0000203,6.82e-15,21;UBERON:0002619,1.46e-10,17;UBERON:0003076,8.24e-10,12;UBERON:0003057,8.24e-10,12;UBERON:0002420,1.90e-09,8;UBERON:0007245,1.90e-09,8;UBERON:0010009,1.90e-09,8;UBERON:0010011,1.90e-09,8;UBERON:0000454,1.90e-09,8;UBERON:0000025,1.44e-08,114;UBERON:0000970,3.95e-08,9;UBERON:0000019,3.95e-08,9;UBERON:0000047,3.95e-08,9;UBERON:0010312,3.95e-08,9;UBERON:0004088,3.95e-08,9;UBERON:0002104,3.95e-08,9;UBERON:0001456,3.95e-08,9;UBERON:0003072,3.95e-08,9;UBERON:0004128,3.95e-08,9;UBERON:0003071,3.95e-08,9;UBERON:0002240,1.05e-07,6;UBERON:0005174,1.05e-07,6;UBERON:0001137,1.05e-07,6;UBERON:0004111,2.93e-07,122;UBERON:0002021,3.66e-07,10;UBERON:0000411,3.66e-07,10;UBERON:0001950,3.66e-07,10
|phase1_expression=0.160148847104794,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.7806839470486,5.81890077199236,6.97214543856797,0,0,0,0,0,0,0.384218305321555,13.2722703754851,14.1756235248275,11.7781978356774,4.85606673486466,3.53389665522582,9.67677313798137,8.33855597858656,17.4651569455904,8.8092704799511,5.49055553766307,5.68344173048101,12.6610836220986,9.33173964744578,12.5019208933622,5.30447698102624,2.8138130501584,4.5839474333043,5.00868595305235,5.41012387036591,13.6071595452469,0.075726193333184,0.226714680320357,0,0,0,0.539703191637817,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0.253359865475099,0,0.34255163915718,0,0,0,0.304465478312141,0.230615497256059,0.452167921657868,0.352766121407114,0.251333182659351,0,0,0,0,0,0,0,31.034764483224,30.1603257811375,0,0,0,0,5.99162557619291,2.28750301409313,2.76439574648302,2.9550134432687,3.58001640262463,3.1168206683934,3.24482526135515,0.101839363850316,0.124406970610093,0,0.631325567659422,3.25301107406759,3.90833577536904,6.30217454318722,6.78171680260718,7.00775941258677,5.12454881139399,4.77878795254617,2.32833033665114,0.215567992932842,0.189106080167819,0.527853372491847,0,0,0,0,1.19420560091096,0,0,0,0,0.234526059981096,0.180062061461015,0,0.393528463494808,0.154267112887378,0,0,0,0.16455984991348,0.164167464079095,0,0,0,0,2.3131894342054,7.71784592844633,0,0,0.639864751605702,0.696710015581316,0.257734922644187,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.228497025219458,0,0,0,0,0,0.442830443938806,0.156998727841375,0.616985819609003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,4.33486592967038,5.62616095642575,0,0,0.315508219416257,0,0.646270193198397,0.238968797952552,0.222798674082394,0.566153061577665,0.404810701674894,0.292255857911312,0.790575555893047,1.92792789853084,0,0.178065603667255,0,0.164970122972535,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0.680879211507576,1.98067203434441,1.03486947026204,0.428674070063185,1.24138163549592,0.178368817602071,1.15184314421485,0.608929898229199,0,0,0,0,0.322928853391811,0.120625849856312,0.358117032009409,0.164140899745061,0,5.37733375830478,0,0,0,0,0,0,0,0,0,0,0.949007980743406,0.203319467126849,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0,0,0,0.56369293868419,2.0932316446157,0.66183396182839,0.194451188344048,0,0,0.117357238645754,0.2604087696879,0.629156066554265,0,0,0,0.405450430580328,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34570784914214,0.167884616364078,0.19318959403219,0.187682475451182,0,0,0,2.82375921308533,2.76195141904306,1.14579102687879,3.60891682921744,2.05524755931193,4.5323633843382,0.675022500231806,2.2516060161211,2.26571204492102,1.55328093525546,2.69847103718859,5.1873233542134,2.90247129782028,0,1.46729213839588,1.10306105070008,1.55572709461131,1.03017528619447,0,1.76888048234658,0.50695859978048,0.943131706930381,0.468207537349412,0.704276676453562,1.09127391015665,0.476293691283074,1.0429589335037,0.578727661391115,1.23625770240992,0.588795680537589,1.02860775715625,0.354951612318675,0.476872379894642,0.581385666529314,0.846984423737976,0.423073039458382,1.28049581010941,0.789209134313529,1.22223702461276,2.24456908663095,1.89816028998679,1.18205378850676,0.409231043169689,1.39443157067369,0.385813221962283,3.74715866906919,0.935726433781634,0.644613162144895,0,0.220591419119515,0.231867835620421
|phase1_expression=0.160148847104794,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.7806839470486,5.81890077199236,6.97214543856797,0,0,0,0,0,0,0.384218305321555,13.2722703754851,14.1756235248275,11.7781978356774,4.85606673486466,3.53389665522582,9.67677313798137,8.33855597858656,17.4651569455904,8.8092704799511,5.49055553766307,5.68344173048101,12.6610836220986,9.33173964744578,12.5019208933622,5.30447698102624,2.8138130501584,4.5839474333043,5.00868595305235,5.41012387036591,13.6071595452469,0.075726193333184,0.226714680320357,0,0,0,0.539703191637817,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0.253359865475099,0,0.34255163915718,0,0,0,0.304465478312141,0.230615497256059,0.452167921657868,0.352766121407114,0.251333182659351,0,0,0,0,0,0,0,31.034764483224,30.1603257811375,0,0,0,0,5.99162557619291,2.28750301409313,2.76439574648302,2.9550134432687,3.58001640262463,3.1168206683934,3.24482526135515,0.101839363850316,0.124406970610093,0,0.631325567659422,3.25301107406759,3.90833577536904,6.30217454318722,6.78171680260718,7.00775941258677,5.12454881139399,4.77878795254617,2.32833033665114,0.215567992932842,0.189106080167819,0.527853372491847,0,0,0,0,1.19420560091096,0,0,0,0,0.234526059981096,0.180062061461015,0,0.393528463494808,0.154267112887378,0,0,0,0.16455984991348,0.164167464079095,0,0,0,0,2.3131894342054,7.71784592844633,0,0,0.639864751605702,0.696710015581316,0.257734922644187,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.228497025219458,0,0,0,0,0,0.442830443938806,0.156998727841375,0.616985819609003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,4.33486592967038,5.62616095642575,0,0,0.315508219416257,0,0.646270193198397,0.238968797952552,0.222798674082394,0.566153061577665,0.404810701674894,0.292255857911312,0.790575555893047,1.92792789853084,0,0.178065603667255,0,0.164970122972535,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0.680879211507576,1.98067203434441,1.03486947026204,0.428674070063185,1.24138163549592,0.178368817602071,1.15184314421485,0.608929898229199,0,0,0,0,0.322928853391811,0.120625849856312,0.358117032009409,0.164140899745061,0,5.37733375830478,0,0,0,0,0,0,0,0,0,0,0.949007980743406,0.203319467126849,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0,0,0,0.56369293868419,2.0932316446157,0.66183396182839,0.194451188344048,0,0,0.117357238645754,0.2604087696879,0.629156066554265,0,0,0,0.405450430580328,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34570784914214,0.167884616364078,0.19318959403219,0.187682475451182,0,0,0,2.82375921308533,2.76195141904306,1.14579102687879,3.60891682921744,2.05524755931193,4.5323633843382,0.675022500231806,2.2516060161211,2.26571204492102,1.55328093525546,2.69847103718859,5.1873233542134,2.90247129782028,0,1.46729213839588,1.10306105070008,1.55572709461131,1.03017528619447,0,1.76888048234658,0.50695859978048,0.943131706930381,0.468207537349412,0.704276676453562,1.09127391015665,0.476293691283074,1.0429589335037,0.578727661391115,1.23625770240992,0.588795680537589,1.02860775715625,0.354951612318675,0.476872379894642,0.581385666529314,0.846984423737976,0.423073039458382,1.28049581010941,0.789209134313529,1.22223702461276,2.24456908663095,1.89816028998679,1.18205378850676,0.409231043169689,1.39443157067369,0.385813221962283,3.74715866906919,0.935726433781634,0.644613162144895,0,0.220591419119515,0.231867835620421
|short_description=p3@Spnb3
}}
}}

Latest revision as of 21:44, 25 September 2015

Short description:p3@Spnb3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Spnb3_5end
Coexpression cluster:MCL_coexpression_mm9:367
Association with transcript: -296bp_to_uc008gao.1_5end
EntrezGene:Spnb3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Spnb3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C315.78
Mouse Granule cells, donor2.CNhs12357.11731-123E35.82
Mouse Granule cells, donor3.CNhs12108.11636-122C76.97
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D513.27
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F514.18
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D911.78
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.53
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D29.68
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.34
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D617.47
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.49
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.68
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D412.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.33
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D812.50
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.30
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.58
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.01
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E113.61
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B231.03
cerebellum, neonate N30.CNhs11135.1395-42I230.16
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.99
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F12.76
cortex, adult.CNhs10473.12-14D52.96
cortex, neonate N30.CNhs11107.1392-42F23.58
diencephalon, adult.CNhs10482.20-12F23.12
diencephalon, neonate N30.CNhs11201.1388-42B23.24
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C63.25
eyeball, embryo E14.CNhs10521.399-16E23.91
eyeball, embryo E15.CNhs10593.426-16C96.30
eyeball, embryo E17.CNhs11023.1261-18D46.78
eyeball, neonate N00.CNhs11207.633-15C67.01
eyeball, neonate N01.CNhs11140.1532-43E75.12
eyeball, neonate N02.CNhs11205.1551-44G84.78
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G17.72
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.33
medulla oblongata, neonate N30.CNhs11200.1396-42A35.63
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C95.38
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F52.09
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.35
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.61
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I82.70
whole body, embryo E12.CNhs10587.857-27C95.19
whole body, embryo E13.CNhs10512.372-23H22.90
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I53.75
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm1.33e-3964
neural plate1.33e-3964
presumptive neural plate1.33e-3964
regional part of nervous system9.74e-3754
neural tube3.05e-3452
neural rod3.05e-3452
future spinal cord3.05e-3452
neural keel3.05e-3452
ecto-epithelium9.92e-3373
pre-chordal neural plate3.66e-3249
ectoderm-derived structure1.25e-3195
ectoderm1.25e-3195
presumptive ectoderm1.25e-3195
central nervous system1.93e-3173
nervous system3.50e-3075
gray matter1.69e-2834
brain2.40e-2847
future brain2.40e-2847
regional part of brain1.42e-2746
anterior neural tube1.30e-2440
regional part of forebrain1.70e-2339
forebrain1.70e-2339
future forebrain1.70e-2339
brain grey matter5.11e-2329
regional part of telencephalon5.11e-2329
telencephalon5.11e-2329
structure with developmental contribution from neural crest1.07e-2292
cerebral cortex6.82e-1521
cerebral hemisphere6.82e-1521
pallium6.82e-1521
regional part of cerebral cortex1.46e-1017
posterior neural tube8.24e-1012
chordal neural plate8.24e-1012
basal ganglion1.90e-098
nuclear complex of neuraxis1.90e-098
aggregate regional part of brain1.90e-098
collection of basal ganglia1.90e-098
cerebral subcortex1.90e-098
tube1.44e-08114
eye3.95e-089
camera-type eye3.95e-089
simple eye3.95e-089
immature eye3.95e-089
ocular region3.95e-089
visual system3.95e-089
face3.95e-089
optic cup3.95e-089
optic vesicle3.95e-089
eye primordium3.95e-089
spinal cord1.05e-076
dorsal region element1.05e-076
dorsum1.05e-076
anatomical conduit2.93e-07122
occipital lobe3.66e-0710
visual cortex3.66e-0710
neocortex3.66e-0710
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