FFCP PHASE1:Mm9::chr9:102256926..102256937,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=270190|HGNC=|MCL_coexpression_id=1|UniProt=Q8CBF3,Q8CA63,B1B1C1|association_with_transcript=85bp_to_ENSMUST00000035129,ENSMUST00000085169,ENSMUST00000149800,NM_001168296,NM_173447,uc009rfn.2,uc009rfo.2,uc012gzg.1_5end|description=CAGE_peak_3_at_Ephb1_5end|id=chr9:102256926..102256937,-|ontology_enrichment_celltype=CL:0000117!2.02e-14!23;CL:0000337!2.02e-14!23;CL:0000540!1.21e-07!33;CL:0000047!1.21e-07!33;CL:0000031!1.21e-07!33;CL:0000404!1.21e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,2.80e-26,23;CL:0000337,2.80e-26,23;CL:0000540,6.79e-18,33;CL:0000047,6.79e-18,33;CL:0000031,6.79e-18,33;CL:0000404,6.79e-18,33;CL:0000393,4.65e-14,39;CL:0000211,4.65e-14,39;CL:0000221,7.21e-13,44;CL:0000133,7.21e-13,44;CL:0002319,4.07e-12,43;CL:0002609,7.12e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!2.96e-30!63;UBERON:0001049!2.76e-28!52;UBERON:0005068!2.76e-28!52;UBERON:0006241!2.76e-28!52;UBERON:0007135!2.76e-28!52;UBERON:0000955!2.12e-26!50;UBERON:0006238!2.12e-26!50;UBERON:0002616!6.46e-26!49;UBERON:0003056!4.18e-25!49;UBERON:0002346!6.23e-25!71;UBERON:0003075!6.23e-25!71;UBERON:0007284!6.23e-25!71;UBERON:0001017!5.85e-23!73;UBERON:0005743!5.85e-23!73;UBERON:0000073!4.87e-22!75;UBERON:0001016!4.87e-22!75;UBERON:0004121!5.00e-22!102;UBERON:0000924!5.00e-22!102;UBERON:0006601!5.00e-22!102;UBERON:0003080!5.20e-22!40;UBERON:0002020!2.02e-21!34;UBERON:0002780!3.34e-21!39;UBERON:0001890!3.34e-21!39;UBERON:0006240!3.34e-21!39;UBERON:0002791!3.60e-18!29;UBERON:0003528!3.60e-18!29;UBERON:0001893!3.60e-18!29;UBERON:0007811!1.63e-16!86;UBERON:0000153!1.79e-15!94;UBERON:0000956!5.63e-13!21;UBERON:0001869!5.63e-13!21;UBERON:0000203!5.63e-13!21;UBERON:0002619!4.51e-11!17;UBERON:0002021!3.24e-08!10;UBERON:0000411!3.24e-08!10;UBERON:0001950!3.24e-08!10;UBERON:0000025!1.73e-07!114;UBERON:0004111!2.17e-07!122;UBERON:0003076!9.35e-07!12;UBERON:0003057!9.35e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.92e-43,54;UBERON:0001049,7.70e-41,52;UBERON:0005068,7.70e-41,52;UBERON:0006241,7.70e-41,52;UBERON:0007135,7.70e-41,52;UBERON:0002346,1.36e-39,64;UBERON:0003075,1.36e-39,64;UBERON:0007284,1.36e-39,64;UBERON:0001017,2.42e-39,73;UBERON:0001016,6.61e-38,75;UBERON:0002020,1.70e-36,34;UBERON:0010371,1.91e-36,73;UBERON:0004121,1.81e-35,95;UBERON:0000924,1.81e-35,95;UBERON:0006601,1.81e-35,95;UBERON:0000955,5.50e-34,47;UBERON:0006238,5.50e-34,47;UBERON:0002616,4.22e-33,46;UBERON:0003056,1.71e-30,49;UBERON:0003528,2.79e-30,29;UBERON:0002791,2.79e-30,29;UBERON:0001893,2.79e-30,29;UBERON:0003080,2.96e-29,40;UBERON:0002780,7.87e-28,39;UBERON:0001890,7.87e-28,39;UBERON:0006240,7.87e-28,39;UBERON:0010314,5.30e-26,92;UBERON:0000956,2.08e-20,21;UBERON:0001869,2.08e-20,21;UBERON:0000203,2.08e-20,21;UBERON:0002619,9.70e-17,17;UBERON:0002021,2.41e-14,10;UBERON:0000411,2.41e-14,10;UBERON:0001950,2.41e-14,10;UBERON:0004111,6.74e-12,122;UBERON:0000025,7.07e-12,114;UBERON:0003076,1.82e-11,12;UBERON:0003057,1.82e-11,12;UBERON:0002420,6.55e-11,8;UBERON:0007245,6.55e-11,8;UBERON:0010009,6.55e-11,8;UBERON:0010011,6.55e-11,8;UBERON:0000454,6.55e-11,8;UBERON:0002240,1.40e-08,6;UBERON:0005174,1.40e-08,6;UBERON:0001137,1.40e-08,6;UBERON:0000369,1.08e-07,5;UBERON:0002435,1.08e-07,5;UBERON:0000204,1.08e-07,5;UBERON:0010082,1.08e-07,5;UBERON:0000483,1.98e-07,174;UBERON:0000119,3.34e-07,176;UBERON:0001948,3.34e-07,5;UBERON:0002315,3.34e-07,5|phase1_expression=3.04282809499109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.659058548203415,0.388859798148567,0.279972843250725,0,0,0,0,0,0,0,7.28339259094552,3.1739458756322,7.60597684207415,0,0,0,0,0,0,0,1.14058573539325,2.29510095163874,1.26194976810829,6.85562362569129,3.97563373712904,3.06226998037385,2.87536413054709,3.67687514644008,1.10115880999389,4.85211884723713,5.22262213071228,3.03338461779446,4.66586982372289,3.12548022334056,4.74611098302348,2.8138130501584,3.66715794664344,3.83017161115768,3.55929201997757,3.54158947068071,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,2.11265129665021,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.29688427812965,0,0,0.230615497256059,0,0.117588707135705,0,0,0.144599356919912,0,0,0,0.484875253135222,0,11.1256702864388,8.79676168616511,0,0,0,0,7.9389038884556,9.15001205637253,9.42407640846483,5.04090528557602,1.53429274398198,6.02585329222724,4.05603157669394,0,0.248813941220186,0,0.631325567659422,0.130120442962704,0.919608417733892,1.62055916824814,2.41127708537144,2.38127747029647,2.0498195245576,0.468508622798644,1.55222022443409,0,0.189106080167819,0.351902248327898,0,0.278047249225598,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0,0.493679549740441,0.492502392237286,0.405344047729279,0,0.439100230582101,0.134206418760372,2.94405927989778,4.21908910755066,0,0,0.426576501070468,0.464473343720877,0.902072229254653,0.80673409849337,0.667134131534611,0.380451252225118,0,0.494096864172033,0,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0.342745537829186,0,0.203651327845314,0.193952487167626,0.350679099451593,0.505892296994058,0.147610147979602,0,0,0,0,0.393117990226406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0.169745085775188,0.234690248288502,0,0,0.585400943573396,0.472905432318573,0.44292937929755,0.159454768657487,0.163863314715738,0.345369963731791,0,0,0,0,0.275936746304732,7.86697890940181,7.14991288212439,0,0.252470927204373,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0.162886959353576,0,0,0.242780636154981,0.604647113929502,0,0,0.307435147943927,0,0,0.356497378384721,0,0,1.03135543248187,0.680879211507576,0.900305470156551,1.4229455216103,1.50035924522115,0.886701168211368,0.178368817602071,0.658196082408484,0.304464949114599,0.704015124191131,0,0.220528398054962,0,0.161464426695906,0.241251699712623,0.716234064018819,0.328281799490123,0,7.41701208042039,0,0,0,0,0,0,0,0,0,0,0.632671987162271,0.203319467126849,0.540026704109006,0.627264888043406,0,0.269728692769641,0.0826534557253359,0,0,0.621339313086926,0,0.448549638131936,0.330916980914195,0,0,0,0.234714477291508,0.2604087696879,0.209718688851422,0.241584120826006,0,0,0.202725215290164,0.205421914329655,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0.375364950902364,0,0,0,11.8597886949584,5.06357760157895,4.01026859407578,6.35856774671644,4.11049511862385,5.2877572817279,5.40018000185445,4.5032120322422,4.53142408984205,8.28416498802912,0.207574695168353,2.39414924040619,1.36586884603307,1.70174701947806,0.628839487883947,0,0.222246727801615,0.824140228955577,0.962757628775446,0.505394423527595,1.77435509923168,1.13175804831646,0.37456602987953,0.832326981263301,0.34461281373368,0,0.811190281613988,0.578727661391115,1.23625770240992,0.588795680537589,0.685738504770831,0.70990322463735,0.238436189947321,0.581385666529314,0.752875043322645,0.846146078916765,0.548783918618318,0.526139422875686,0.407412341537585,1.12228454331548,0.474540072496697,0.394017929502254,1.22769312950907,0.309873682371932,1.15743966588685,1.74867404556562,0.701794825336225,1.50409737833809,0.382576664137687,0.661774257358546,0.231867835620421|short_description=p3@Ephb1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=270190 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q8CBF3,Q8CA63,B1B1C1 | |||
|association_with_transcript=85bp_to_ENSMUST00000035129,ENSMUST00000085169,ENSMUST00000149800,NM_001168296,NM_173447,uc009rfn.2,uc009rfo.2,uc012gzg.1_5end | |||
|cluster_id=chr9:102256926..102256937,- | |||
|description=CAGE_peak_3_at_Ephb1_5end | |||
|id=chr9:102256926..102256937,- | |||
|ontology_enrichment_celltype=CL:0000117!2.02e-14!23;CL:0000337!2.02e-14!23;CL:0000540!1.21e-07!33;CL:0000047!1.21e-07!33;CL:0000031!1.21e-07!33;CL:0000404!1.21e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.80e-26,23;CL:0000337,2.80e-26,23;CL:0000540,6.79e-18,33;CL:0000047,6.79e-18,33;CL:0000031,6.79e-18,33;CL:0000404,6.79e-18,33;CL:0000393,4.65e-14,39;CL:0000211,4.65e-14,39;CL:0000221,7.21e-13,44;CL:0000133,7.21e-13,44;CL:0002319,4.07e-12,43;CL:0002609,7.12e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.96e-30!63;UBERON:0001049!2.76e-28!52;UBERON:0005068!2.76e-28!52;UBERON:0006241!2.76e-28!52;UBERON:0007135!2.76e-28!52;UBERON:0000955!2.12e-26!50;UBERON:0006238!2.12e-26!50;UBERON:0002616!6.46e-26!49;UBERON:0003056!4.18e-25!49;UBERON:0002346!6.23e-25!71;UBERON:0003075!6.23e-25!71;UBERON:0007284!6.23e-25!71;UBERON:0001017!5.85e-23!73;UBERON:0005743!5.85e-23!73;UBERON:0000073!4.87e-22!75;UBERON:0001016!4.87e-22!75;UBERON:0004121!5.00e-22!102;UBERON:0000924!5.00e-22!102;UBERON:0006601!5.00e-22!102;UBERON:0003080!5.20e-22!40;UBERON:0002020!2.02e-21!34;UBERON:0002780!3.34e-21!39;UBERON:0001890!3.34e-21!39;UBERON:0006240!3.34e-21!39;UBERON:0002791!3.60e-18!29;UBERON:0003528!3.60e-18!29;UBERON:0001893!3.60e-18!29;UBERON:0007811!1.63e-16!86;UBERON:0000153!1.79e-15!94;UBERON:0000956!5.63e-13!21;UBERON:0001869!5.63e-13!21;UBERON:0000203!5.63e-13!21;UBERON:0002619!4.51e-11!17;UBERON:0002021!3.24e-08!10;UBERON:0000411!3.24e-08!10;UBERON:0001950!3.24e-08!10;UBERON:0000025!1.73e-07!114;UBERON:0004111!2.17e-07!122;UBERON:0003076!9.35e-07!12;UBERON:0003057!9.35e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.92e-43,54;UBERON:0001049,7.70e-41,52;UBERON:0005068,7.70e-41,52;UBERON:0006241,7.70e-41,52;UBERON:0007135,7.70e-41,52;UBERON:0002346,1.36e-39,64;UBERON:0003075,1.36e-39,64;UBERON:0007284,1.36e-39,64;UBERON:0001017,2.42e-39,73;UBERON:0001016,6.61e-38,75;UBERON:0002020,1.70e-36,34;UBERON:0010371,1.91e-36,73;UBERON:0004121,1.81e-35,95;UBERON:0000924,1.81e-35,95;UBERON:0006601,1.81e-35,95;UBERON:0000955,5.50e-34,47;UBERON:0006238,5.50e-34,47;UBERON:0002616,4.22e-33,46;UBERON:0003056,1.71e-30,49;UBERON:0003528,2.79e-30,29;UBERON:0002791,2.79e-30,29;UBERON:0001893,2.79e-30,29;UBERON:0003080,2.96e-29,40;UBERON:0002780,7.87e-28,39;UBERON:0001890,7.87e-28,39;UBERON:0006240,7.87e-28,39;UBERON:0010314,5.30e-26,92;UBERON:0000956,2.08e-20,21;UBERON:0001869,2.08e-20,21;UBERON:0000203,2.08e-20,21;UBERON:0002619,9.70e-17,17;UBERON:0002021,2.41e-14,10;UBERON:0000411,2.41e-14,10;UBERON:0001950,2.41e-14,10;UBERON:0004111,6.74e-12,122;UBERON:0000025,7.07e-12,114;UBERON:0003076,1.82e-11,12;UBERON:0003057,1.82e-11,12;UBERON:0002420,6.55e-11,8;UBERON:0007245,6.55e-11,8;UBERON:0010009,6.55e-11,8;UBERON:0010011,6.55e-11,8;UBERON:0000454,6.55e-11,8;UBERON:0002240,1.40e-08,6;UBERON:0005174,1.40e-08,6;UBERON:0001137,1.40e-08,6;UBERON:0000369,1.08e-07,5;UBERON:0002435,1.08e-07,5;UBERON:0000204,1.08e-07,5;UBERON:0010082,1.08e-07,5;UBERON:0000483,1.98e-07,174;UBERON:0000119,3.34e-07,176;UBERON:0001948,3.34e-07,5;UBERON:0002315,3.34e-07,5 | |||
|phase1_expression=3.04282809499109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.659058548203415,0.388859798148567,0.279972843250725,0,0,0,0,0,0,0,7.28339259094552,3.1739458756322,7.60597684207415,0,0,0,0,0,0,0,1.14058573539325,2.29510095163874,1.26194976810829,6.85562362569129,3.97563373712904,3.06226998037385,2.87536413054709,3.67687514644008,1.10115880999389,4.85211884723713,5.22262213071228,3.03338461779446,4.66586982372289,3.12548022334056,4.74611098302348,2.8138130501584,3.66715794664344,3.83017161115768,3.55929201997757,3.54158947068071,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,2.11265129665021,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.29688427812965,0,0,0.230615497256059,0,0.117588707135705,0,0,0.144599356919912,0,0,0,0.484875253135222,0,11.1256702864388,8.79676168616511,0,0,0,0,7.9389038884556,9.15001205637253,9.42407640846483,5.04090528557602,1.53429274398198,6.02585329222724,4.05603157669394,0,0.248813941220186,0,0.631325567659422,0.130120442962704,0.919608417733892,1.62055916824814,2.41127708537144,2.38127747029647,2.0498195245576,0.468508622798644,1.55222022443409,0,0.189106080167819,0.351902248327898,0,0.278047249225598,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0,0.493679549740441,0.492502392237286,0.405344047729279,0,0.439100230582101,0.134206418760372,2.94405927989778,4.21908910755066,0,0,0.426576501070468,0.464473343720877,0.902072229254653,0.80673409849337,0.667134131534611,0.380451252225118,0,0.494096864172033,0,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0.342745537829186,0,0.203651327845314,0.193952487167626,0.350679099451593,0.505892296994058,0.147610147979602,0,0,0,0,0.393117990226406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0.169745085775188,0.234690248288502,0,0,0.585400943573396,0.472905432318573,0.44292937929755,0.159454768657487,0.163863314715738,0.345369963731791,0,0,0,0,0.275936746304732,7.86697890940181,7.14991288212439,0,0.252470927204373,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0.162886959353576,0,0,0.242780636154981,0.604647113929502,0,0,0.307435147943927,0,0,0.356497378384721,0,0,1.03135543248187,0.680879211507576,0.900305470156551,1.4229455216103,1.50035924522115,0.886701168211368,0.178368817602071,0.658196082408484,0.304464949114599,0.704015124191131,0,0.220528398054962,0,0.161464426695906,0.241251699712623,0.716234064018819,0.328281799490123,0,7.41701208042039,0,0,0,0,0,0,0,0,0,0,0.632671987162271,0.203319467126849,0.540026704109006,0.627264888043406,0,0.269728692769641,0.0826534557253359,0,0,0.621339313086926,0,0.448549638131936,0.330916980914195,0,0,0,0.234714477291508,0.2604087696879,0.209718688851422,0.241584120826006,0,0,0.202725215290164,0.205421914329655,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0.375364950902364,0,0,0,11.8597886949584,5.06357760157895,4.01026859407578,6.35856774671644,4.11049511862385,5.2877572817279,5.40018000185445,4.5032120322422,4.53142408984205,8.28416498802912,0.207574695168353,2.39414924040619,1.36586884603307,1.70174701947806,0.628839487883947,0,0.222246727801615,0.824140228955577,0.962757628775446,0.505394423527595,1.77435509923168,1.13175804831646,0.37456602987953,0.832326981263301,0.34461281373368,0,0.811190281613988,0.578727661391115,1.23625770240992,0.588795680537589,0.685738504770831,0.70990322463735,0.238436189947321,0.581385666529314,0.752875043322645,0.846146078916765,0.548783918618318,0.526139422875686,0.407412341537585,1.12228454331548,0.474540072496697,0.394017929502254,1.22769312950907,0.309873682371932,1.15743966588685,1.74867404556562,0.701794825336225,1.50409737833809,0.382576664137687,0.661774257358546,0.231867835620421 | |||
|short_description=p3@Ephb1 | |||
}} |
Latest revision as of 01:32, 26 September 2015
Short description: | p3@Ephb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ephb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 85bp_to_ENSMUST00000035129, ENSMUST00000085169, ENSMUST00000149800, NM_001168296, NM_173447, uc009rfn.2, uc009rfo.2, uc012gzg.1_5end |
EntrezGene: | Ephb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.80e-26 | 23 |
neuroblast (sensu Vertebrata) | 2.80e-26 | 23 |
neuron | 6.79e-18 | 33 |
neuronal stem cell | 6.79e-18 | 33 |
neuroblast | 6.79e-18 | 33 |
electrically signaling cell | 6.79e-18 | 33 |
electrically responsive cell | 4.65e-14 | 39 |
electrically active cell | 4.65e-14 | 39 |
ectodermal cell | 7.21e-13 | 44 |
neurectodermal cell | 7.21e-13 | 44 |
neural cell | 4.07e-12 | 43 |
neuron of cerebral cortex | 7.12e-07 | 6 |