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FFCP PHASE1:Mm9::chr7:148513548..148513560,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=54006
|EntrezGene=54006
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q9Z1T5,Q8BUW3
|UniProt=Q9Z1T5,Q8BUW3
|association_with_transcript=63bp_to_ENSMUST00000080553,NM_016874,NR_027769,uc009kkn.2,uc009kko.2,uc012fwv.1,uc012fww.1_5end
|association_with_transcript=63bp_to_ENSMUST00000080553,NM_016874,NR_027769,uc009kkn.2,uc009kko.2,uc012fwv.1,uc012fww.1_5end
|cluster_id=chr7:148513548..148513560,-
|description=CAGE_peak_7_at_Deaf1_5end
|description=CAGE_peak_7_at_Deaf1_5end
|id=chr7:148513548..148513560,-
|id=chr7:148513548..148513560,-
|ontology_enrichment_celltype=CL:0000117!1.42e-07!23;CL:0000337!1.42e-07!23;CL:0000540!9.04e-07!33;CL:0000047!9.04e-07!33;CL:0000031!9.04e-07!33;CL:0000404!9.04e-07!33
|ontology_enrichment_celltype=CL:0000117!1.42e-07!23;CL:0000337!1.42e-07!23;CL:0000540!9.04e-07!33;CL:0000047!9.04e-07!33;CL:0000031!9.04e-07!33;CL:0000404!9.04e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,5.42e-15,23;CL:0000337,5.42e-15,23;CL:0000540,1.80e-12,33;CL:0000047,1.80e-12,33;CL:0000031,1.80e-12,33;CL:0000404,1.80e-12,33;CL:0000393,1.47e-09,39;CL:0000211,1.47e-09,39;CL:0002319,4.23e-08,43;CL:0000221,8.85e-08,44;CL:0000133,8.85e-08,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!8.34e-14!102;UBERON:0000924!8.34e-14!102;UBERON:0006601!8.34e-14!102;UBERON:0002020!9.93e-13!34;UBERON:0001017!2.36e-12!73;UBERON:0005743!2.36e-12!73;UBERON:0001049!8.86e-12!52;UBERON:0005068!8.86e-12!52;UBERON:0006241!8.86e-12!52;UBERON:0007135!8.86e-12!52;UBERON:0002791!9.58e-12!29;UBERON:0003528!9.58e-12!29;UBERON:0001893!9.58e-12!29;UBERON:0000073!9.74e-12!75;UBERON:0001016!9.74e-12!75;UBERON:0002346!5.11e-11!71;UBERON:0003075!5.11e-11!71;UBERON:0007284!5.11e-11!71;UBERON:0002616!6.59e-11!49;UBERON:0000955!6.82e-11!50;UBERON:0006238!6.82e-11!50;UBERON:0000033!1.71e-10!63;UBERON:0003080!6.92e-10!40;UBERON:0002780!1.14e-09!39;UBERON:0001890!1.14e-09!39;UBERON:0006240!1.14e-09!39;UBERON:0003056!1.23e-09!49;UBERON:0000956!6.09e-08!21;UBERON:0001869!6.09e-08!21;UBERON:0000203!6.09e-08!21
|ontology_enrichment_uberon_v019_2=UBERON:0002020,9.47e-21,34;UBERON:0003528,1.40e-17,29;UBERON:0002791,1.40e-17,29;UBERON:0001893,1.40e-17,29;UBERON:0000073,5.97e-16,54;UBERON:0004121,1.05e-15,95;UBERON:0000924,1.05e-15,95;UBERON:0006601,1.05e-15,95;UBERON:0001049,1.38e-15,52;UBERON:0005068,1.38e-15,52;UBERON:0006241,1.38e-15,52;UBERON:0007135,1.38e-15,52;UBERON:0010371,1.50e-15,73;UBERON:0001017,3.28e-15,73;UBERON:0001016,1.70e-14,75;UBERON:0002346,1.36e-13,64;UBERON:0003075,1.36e-13,64;UBERON:0007284,1.36e-13,64;UBERON:0002616,3.55e-13,46;UBERON:0000955,1.02e-12,47;UBERON:0006238,1.02e-12,47;UBERON:0002780,1.28e-12,39;UBERON:0001890,1.28e-12,39;UBERON:0006240,1.28e-12,39;UBERON:0003080,4.05e-12,40;UBERON:0003056,2.82e-11,49;UBERON:0000956,5.86e-11,21;UBERON:0001869,5.86e-11,21;UBERON:0000203,5.86e-11,21;UBERON:0002619,1.07e-08,17;UBERON:0002420,3.60e-08,8;UBERON:0007245,3.60e-08,8;UBERON:0010009,3.60e-08,8;UBERON:0010011,3.60e-08,8;UBERON:0000454,3.60e-08,8;UBERON:0000369,5.62e-08,5;UBERON:0002435,5.62e-08,5;UBERON:0000204,5.62e-08,5;UBERON:0010082,5.62e-08,5;UBERON:0010314,3.76e-07,92;UBERON:0002021,8.10e-07,10;UBERON:0000411,8.10e-07,10;UBERON:0001950,8.10e-07,10
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|phase1_expression=0.640595388419176,0.697950815278722,0.909998478779072,1.51232105653415,1.00179145989269,0.671517087647559,0.467225281191051,0.516493293766305,0,0.234064526321993,0.171217968225505,0.0797721589953364,0.856003649656029,0.437102012094987,0.333109761815663,0.404950534779652,0,0.157731082679119,0.137114433605739,0,0.680346321208558,0.397163804803541,0.261199789138935,0.159992422793407,0,0.57423196411502,1.29228598847722,0.215471232685889,0.570070258369122,0,0,0.635030673459631,1.23012957516914,0,0.288851619751275,0.498703936075477,0.816677425049476,0.837063261473815,0,0,0.588231488031014,0,0.485510353031154,0.251793635951155,0.202753862439029,0.550640256485045,0.782391344348039,0.218025156380447,0.878744730937887,0.58328969722285,0.55994568650145,0,0.167782606057736,0,0.672187598284928,0.514518872071894,0.286533439938757,0,1.61853168687678,3.1739458756322,1.26766280701236,0,0,0.449949858640699,0,0.7104801149461,0.898800331555214,0.768436610643109,2.17748185847803,2.16009501330705,1.68259969081106,1.71390590642282,0,2.08234358665422,2.1086003624012,0,0,1.65993539510744,0.921639199537461,1.84640802822271,2.65314166446988,2.6045668527838,1.3959149950069,0.56276261003168,1.37518422999129,1.47314292736834,1.42371680799103,2.42319279572891,0.302904773332736,0.377857800533928,0.289864488701678,0.860423876981386,0.679971333707751,1.07940638327563,0.649776417447669,1.79210754838934,0.280888840263504,0.511290967734173,0.519572009205738,0,0.845060518660083,0,0,0,0.432982082022428,0.253359865475099,0.505524445014783,0.22836775943812,0.517875767294343,0.593768556259299,1.21439728736295,0.304465478312141,0.691846491768175,0.753613202763113,0.470354828542819,0.502666365318702,0.247194967734374,0.433798070759735,0,0.647067399789637,0.220841518460394,0.484875253135222,1.86391761218122,2.34224637609238,2.30391377494801,0.766371165625774,0.11981512450592,0,0.127070227073065,0.898743836428936,3.20250421973039,3.8952849154988,0.869121600961382,2.04572365864264,2.0778804455956,0.486723789203273,0.305518091550949,0.373220911830279,0.252722758433675,1.05220927943237,0.260240885925407,1.37941262660084,0.720248519221397,0.90422890701429,1.08858398642125,0.2562274405697,0.843315521037559,0,0.431135985865684,1.51284864134255,0.351902248327898,0.657587197282725,0.278047249225598,0.696504333044333,1.02891068203972,0.199034266818493,0,0,0.284163499395593,0.414251545071004,0.703578179943289,0.180062061461015,0,0.393528463494808,0.308534225774757,0.697601834251224,0.268273401399619,0.116765342367169,0.822799249567402,0.656669856316381,0.56748166682099,0.877199924551994,0.439100230582101,0.536825675041487,2.3131894342054,2.26390147234426,1.65209391491899,0.528901133327089,0.853153002140936,0.232236671860439,0.515469845288373,0.201683524623343,1.11189021922435,0.190225626112559,0,0.658795818896044,0.502670417600539,0.397912944082302,0.779856348476481,0.898819408654221,0.216138049874694,0.398282546508734,0.189667900953082,0.685491075658373,1.1270773567308,0.203651327845314,0.969762435838129,0.350679099451593,0.569128834118316,0.295220295959204,0.784993639206874,0.616985819609003,0.296452627087149,0.83422552858047,0,0.224862112384854,0.405720242777006,0.482354319504834,0.25462585178142,0.575392274901621,0.162135226775035,1.37280706594041,0,0.372140947668503,0.936113019343682,1.76805214562978,0.358794827043824,0.482443521363367,0.369506380333209,0.37898282354097,0.488894929326078,0.848725428875941,0,0.837531287209079,0.714130922658041,0.195133647857799,0.315270288212382,1.10732344824387,0.956728611944923,0.655453258862952,0,0.723245292907558,1.50791283939272,0.54390568381871,0.983528546038072,1.65562047782839,1.12385412991454,0.820481806145422,0.163934945376675,1.00988370881749,0.631016438832513,0,0.861693590931196,1.67278158566786,1.11399337041197,0.566153061577665,0.404810701674894,1.75353514746787,0,0.642642632843614,0.567760340833074,0.890328018336276,0.488660878060728,0.659880491890142,1.32745138339963,0.242780636154981,1.209294227859,0.377210159511796,0.590603785761546,0.307435147943927,0.775284879504663,0.363533729477506,0.356497378384721,0,0,0,0.680879211507576,0.720244376125241,0.258717367565509,0.428674070063185,0.354680467284547,0.713475270408282,0.164549020602121,0.608929898229199,0.469343416127421,0.63549621259146,0.441056796109924,1.15420377059036,1.29171541356724,1.14594557363496,0.596861720015682,1.80554989719567,1.1659233465194,0.370850604021019,0.170870880797853,1.03193433981611,0.185194527369712,0.941842285023455,0.546776910884101,0.228778173206523,0.339956859987711,0,0,0,0.474503990371703,0.609958401380546,0,0.418176592028937,0.218362563746178,0.404593039154462,0.247960367176008,0,0.518459893167171,0,0.56369293868419,0.149516546043979,0.165458490457098,0,0.645799117388655,0.337912250981556,0.234714477291508,0.2604087696879,0.209718688851422,0.241584120826006,1.15212002503146,0.316011120628178,0.202725215290164,0.205421914329655,0.129920822977795,0.179026695667481,0.198681354781265,0.360586348559907,0.295379054349154,0.302899349844443,0.457240839929999,0.604957110821043,0.487289403698762,0.481059208201647,0.233753804363138,0.906921534460845,0.221985953374065,0,0.167884616364078,0.772758376128762,0,0.36630324853453,1.07184189539533,0,2.25900737046827,1.84130094602871,1.14579102687879,0.859265911718438,1.37016503954128,1.5107877947794,2.70009000092722,1.80128481289688,0.453142408984205,1.03552062350364,0.31136204275253,0,0.341467211508268,0.972426868273176,1.04806581313991,0.735374033800057,0.44449345560323,0.824140228955577,0.320919209591815,1.01078884705519,0.50695859978048,0.943131706930381,1.21733959710847,0.704276676453562,0.746661096422973,0,1.50649623728312,0.964546102318525,0.412085900803307,0.588795680537589,0.685738504770831,0.177475806159338,0.238436189947321,0.872078499793971,0.846984423737976,0.676916863133412,1.64635175585495,0.789209134313529,0.407412341537585,0.561142271657738,1.06771516311757,1.18205378850676,1.22769312950907,1.39443157067369,1.35034627686799,1.24905288968973,0.467863216890817,0.644613162144895,0.57386499620653,0.220591419119515,0.231867835620421
|short_description=p7@Deaf1
|short_description=p7@Deaf1
}}
}}

Latest revision as of 03:44, 26 September 2015

Short description:p7@Deaf1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_7_at_Deaf1_5end
Coexpression cluster:NA
Association with transcript: 63bp_to_ENSMUST00000080553, NM_016874, NR_027769, uc009kkn.2, uc009kko.2, uc012fwv.1, uc012fww.1_5end
EntrezGene:Deaf1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p7@Deaf1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.86
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.44
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.62
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.18
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.16
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.08
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.11
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.66
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.85
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.42
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I22.30
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.90
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F13.90
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C61.09
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G12.26
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.57
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A31.77
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C21.12
medulla oblongata, neonate N30.CNhs11200.1396-42A30.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H31.15
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C41.81
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.60
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)5.42e-1523
neuroblast (sensu Vertebrata)5.42e-1523
neuron1.80e-1233
neuronal stem cell1.80e-1233
neuroblast1.80e-1233
electrically signaling cell1.80e-1233
electrically responsive cell1.47e-0939
electrically active cell1.47e-0939
neural cell4.23e-0843
ectodermal cell8.85e-0844
neurectodermal cell8.85e-0844

Uber anatomy
Ontology termp-valuen
gray matter9.47e-2134
brain grey matter1.40e-1729
regional part of telencephalon1.40e-1729
telencephalon1.40e-1729
regional part of nervous system5.97e-1654
ectoderm-derived structure1.05e-1595
ectoderm1.05e-1595
presumptive ectoderm1.05e-1595
neural tube1.38e-1552
neural rod1.38e-1552
future spinal cord1.38e-1552
neural keel1.38e-1552
ecto-epithelium1.50e-1573
central nervous system3.28e-1573
nervous system1.70e-1475
neurectoderm1.36e-1364
neural plate1.36e-1364
presumptive neural plate1.36e-1364
regional part of brain3.55e-1346
brain1.02e-1247
future brain1.02e-1247
regional part of forebrain1.28e-1239
forebrain1.28e-1239
future forebrain1.28e-1239
anterior neural tube4.05e-1240
pre-chordal neural plate2.82e-1149
cerebral cortex5.86e-1121
cerebral hemisphere5.86e-1121
pallium5.86e-1121
regional part of cerebral cortex1.07e-0817
basal ganglion3.60e-088
nuclear complex of neuraxis3.60e-088
aggregate regional part of brain3.60e-088
collection of basal ganglia3.60e-088
cerebral subcortex3.60e-088
corpus striatum5.62e-085
striatum5.62e-085
ventral part of telencephalon5.62e-085
future corpus striatum5.62e-085
structure with developmental contribution from neural crest3.76e-0792
occipital lobe8.10e-0710
visual cortex8.10e-0710
neocortex8.10e-0710
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