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FFCP PHASE1:Mm9::chr19:8913640..8913651,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=14704
|EntrezGene=14704
|HGNC=
|HGNC=
|MCL_coexpression_id=87
|TSSclassifier=NA
|UniProt=P63216
|UniProt=P63216
|association_with_transcript=84bp_to_ENSMUST00000096259,NM_010316,uc008gnh.1_5end
|association_with_transcript=84bp_to_ENSMUST00000096259,NM_010316,uc008gnh.1_5end
|cluster_id=chr19:8913640..8913651,-
|description=CAGE_peak_2_at_Gng3_5end
|description=CAGE_peak_2_at_Gng3_5end
|id=chr19:8913640..8913651,-
|id=chr19:8913640..8913651,-
|ontology_enrichment_celltype=CL:0002319!8.17e-27!43;CL:0000221!1.11e-26!44;CL:0000133!1.11e-26!44;CL:0000540!8.08e-25!33;CL:0000047!8.08e-25!33;CL:0000031!8.08e-25!33;CL:0000404!8.08e-25!33;CL:0000055!3.30e-20!50;CL:0000117!1.30e-19!23;CL:0000337!1.30e-19!23;CL:0000393!2.17e-18!39;CL:0000211!2.17e-18!39;CL:0002321!9.09e-10!70;CL:0000220!9.09e-10!70
|ontology_enrichment_celltype=CL:0002319!8.17e-27!43;CL:0000221!1.11e-26!44;CL:0000133!1.11e-26!44;CL:0000540!8.08e-25!33;CL:0000047!8.08e-25!33;CL:0000031!8.08e-25!33;CL:0000404!8.08e-25!33;CL:0000055!3.30e-20!50;CL:0000117!1.30e-19!23;CL:0000337!1.30e-19!23;CL:0000393!2.17e-18!39;CL:0000211!2.17e-18!39;CL:0002321!9.09e-10!70;CL:0000220!9.09e-10!70
|ontology_enrichment_celltype_v019_2=CL:0000540,1.92e-30,33;CL:0000047,1.92e-30,33;CL:0000031,1.92e-30,33;CL:0000404,1.92e-30,33;CL:0002319,4.64e-30,43;CL:0000221,4.96e-29,44;CL:0000133,4.96e-29,44;CL:0000117,6.68e-25,23;CL:0000337,6.68e-25,23;CL:0000393,9.91e-24,39;CL:0000211,9.91e-24,39;CL:0002321,5.95e-13,70;CL:0000107,6.45e-08,9;CL:0002609,4.98e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.12e-41!75;UBERON:0001016!1.12e-41!75;UBERON:0001017!2.06e-40!73;UBERON:0005743!2.06e-40!73;UBERON:0004121!8.77e-37!102;UBERON:0000924!8.77e-37!102;UBERON:0006601!8.77e-37!102;UBERON:0002346!6.17e-31!71;UBERON:0003075!6.17e-31!71;UBERON:0007284!6.17e-31!71;UBERON:0001049!4.42e-26!52;UBERON:0005068!4.42e-26!52;UBERON:0006241!4.42e-26!52;UBERON:0007135!4.42e-26!52;UBERON:0000033!1.03e-25!63;UBERON:0000955!4.97e-24!50;UBERON:0006238!4.97e-24!50;UBERON:0002616!1.88e-23!49;UBERON:0002020!3.41e-23!34;UBERON:0003056!3.42e-22!49;UBERON:0003080!4.23e-19!40;UBERON:0002791!8.61e-19!29;UBERON:0003528!8.61e-19!29;UBERON:0001893!8.61e-19!29;UBERON:0002780!1.37e-18!39;UBERON:0001890!1.37e-18!39;UBERON:0006240!1.37e-18!39;UBERON:0000956!5.52e-13!21;UBERON:0001869!5.52e-13!21;UBERON:0000203!5.52e-13!21;UBERON:0007811!1.31e-12!86;UBERON:0000153!1.41e-10!94;UBERON:0002619!3.27e-10!17;UBERON:0003076!1.64e-07!12;UBERON:0003057!1.64e-07!12;UBERON:0000010!2.30e-07!11;UBERON:0002021!4.23e-07!10;UBERON:0000411!4.23e-07!10;UBERON:0001950!4.23e-07!10;UBERON:0002420!4.68e-07!8;UBERON:0007245!4.68e-07!8;UBERON:0010009!4.68e-07!8;UBERON:0010011!4.68e-07!8;UBERON:0000454!4.68e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.69e-45,75;UBERON:0001017,1.03e-43,73;UBERON:0004121,1.22e-39,95;UBERON:0000924,1.22e-39,95;UBERON:0006601,1.22e-39,95;UBERON:0002346,5.11e-33,64;UBERON:0003075,5.11e-33,64;UBERON:0007284,5.11e-33,64;UBERON:0000073,3.86e-30,54;UBERON:0001049,7.10e-28,52;UBERON:0005068,7.10e-28,52;UBERON:0006241,7.10e-28,52;UBERON:0007135,7.10e-28,52;UBERON:0002020,2.99e-27,34;UBERON:0010371,1.35e-26,73;UBERON:0000955,2.07e-22,47;UBERON:0006238,2.07e-22,47;UBERON:0002616,1.04e-21,46;UBERON:0003528,1.19e-21,29;UBERON:0002791,1.19e-21,29;UBERON:0001893,1.19e-21,29;UBERON:0003056,4.59e-21,49;UBERON:0003080,5.47e-19,40;UBERON:0002780,2.35e-18,39;UBERON:0001890,2.35e-18,39;UBERON:0006240,2.35e-18,39;UBERON:0010314,4.47e-18,92;UBERON:0000956,2.84e-14,21;UBERON:0001869,2.84e-14,21;UBERON:0000203,2.84e-14,21;UBERON:0002619,8.81e-11,17;UBERON:0003076,1.70e-09,12;UBERON:0003057,1.70e-09,12;UBERON:0000010,4.56e-09,11;UBERON:0002021,1.00e-08,10;UBERON:0000411,1.00e-08,10;UBERON:0001950,1.00e-08,10;UBERON:0002420,1.14e-08,8;UBERON:0007245,1.14e-08,8;UBERON:0010009,1.14e-08,8;UBERON:0010011,1.14e-08,8;UBERON:0000454,1.14e-08,8;UBERON:0002410,6.45e-08,9;UBERON:0002240,1.31e-07,6;UBERON:0005174,1.31e-07,6;UBERON:0001137,1.31e-07,6;UBERON:0001948,6.94e-07,5;UBERON:0002315,6.94e-07,5
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.54833334163237,0,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.4797861030117,0.439372365468944,0.58328969722285,0.55994568650145,2.87505128729943,0,0,0,0,0,0,59.0764065710026,31.2104677770499,62.7493089471117,0,0,0,0,0,2.99600110518405,5.37905627450176,22.5006458709397,14.1756235248275,29.0248446664907,60.2723577092026,84.1509141025648,24.4981598429908,21.4693855080849,14.7075005857603,47.3498288297371,25.9205296312931,21.0440950561054,73.460662265718,38.9737361746265,54.6959039084598,19.2636269310953,30.9519435517424,28.1148775909331,43.8996592355765,60.6503360204179,45.295065335548,2.65041676666144,4.98772296704784,0,0,0,0,0,0,2.66844398250329,0,0,0,0.281686839553361,0,0,0,0,0,0,1.1418387971906,0,0,0.520455980298408,1.21786191324856,0.922461989024234,0.452167921657868,0.823120949949934,0,0,0,0,0,0,0,0,1.46390398505774,3.35114730901528,0,0,0,0,3.2953940669061,2.74500361691176,5.27748278874031,7.12679712788333,3.3243009452943,4.36354893575076,5.353961681236,0,0,0,0.841767423545896,0.780722657776222,1.83921683546778,3.78130472591233,1.35634336052144,1.49680298132921,2.562274405697,1.3118241438362,3.10444044886819,0.215567992932842,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.67782861123144,6.07137213037778,0,0.264450566663544,0.213288250535234,0.464473343720877,0.644337306610467,0.80673409849337,0.22237804384487,0.190225626112559,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0.432276099749388,0,0,0.342745537829186,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.0275294993896,4.92289083687253,0,0,11.6738041184015,18.350620981942,20.2497993868831,1.67278158566786,2.89638276307112,3.67999490025482,6.07216052512342,11.9824901743638,9.48690667071656,4.17717711348349,0.425820255624806,0,0,0,0,0,0,0.188605079755898,0.295301892880773,0.307435147943927,0,0,0,0.632073515871632,0,0,0,0.540183282093931,0.258717367565509,0,0.709360934569094,1.78368817602071,0.987294123612726,1.2178597964584,0,0,0.220528398054962,0,0,0,0,0,0,7.04616147639937,0,0,0,0,0,0,0,0,0,0,0.949007980743406,0.609958401380546,0.540026704109006,0.418176592028937,0.655087691238533,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8130515932779,12.4287813856938,13.1765968091061,8.93636548187176,6.16574267793578,4.5323633843382,2.70009000092722,4.5032120322422,7.70342095273148,3.62432218226274,1.45302286617847,3.19219898720825,1.19513524027894,0.486213434136588,2.93458427679175,1.47074806760011,1.33348036680969,2.06035057238894,1.92551525755089,2.27427490587418,1.2673964994512,2.07488975524684,1.96647165686753,1.28050304809739,1.03383844120104,1.42888107384922,0.811190281613988,0.964546102318525,1.64834360321323,1.76638704161277,2.05721551431249,1.06485483695602,1.1921809497366,1.45346416632329,1.88218760830661,1.52306294205018,0.914639864363863,0.789209134313529,1.22223702461276,1.68342681497322,1.30498519936592,0.591026894253381,1.63692417267876,1.39443157067369,0.385813221962283,2.99772693525535,0.935726433781634,1.07435527024149,0.382576664137687,0.441182838239031,0.927471342481686
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.54833334163237,0,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.4797861030117,0.439372365468944,0.58328969722285,0.55994568650145,2.87505128729943,0,0,0,0,0,0,59.0764065710026,31.2104677770499,62.7493089471117,0,0,0,0,0,2.99600110518405,5.37905627450176,22.5006458709397,14.1756235248275,29.0248446664907,60.2723577092026,84.1509141025648,24.4981598429908,21.4693855080849,14.7075005857603,47.3498288297371,25.9205296312931,21.0440950561054,73.460662265718,38.9737361746265,54.6959039084598,19.2636269310953,30.9519435517424,28.1148775909331,43.8996592355765,60.6503360204179,45.295065335548,2.65041676666144,4.98772296704784,0,0,0,0,0,0,2.66844398250329,0,0,0,0.281686839553361,0,0,0,0,0,0,1.1418387971906,0,0,0.520455980298408,1.21786191324856,0.922461989024234,0.452167921657868,0.823120949949934,0,0,0,0,0,0,0,0,1.46390398505774,3.35114730901528,0,0,0,0,3.2953940669061,2.74500361691176,5.27748278874031,7.12679712788333,3.3243009452943,4.36354893575076,5.353961681236,0,0,0,0.841767423545896,0.780722657776222,1.83921683546778,3.78130472591233,1.35634336052144,1.49680298132921,2.562274405697,1.3118241438362,3.10444044886819,0.215567992932842,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.67782861123144,6.07137213037778,0,0.264450566663544,0.213288250535234,0.464473343720877,0.644337306610467,0.80673409849337,0.22237804384487,0.190225626112559,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0.432276099749388,0,0,0.342745537829186,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.0275294993896,4.92289083687253,0,0,11.6738041184015,18.350620981942,20.2497993868831,1.67278158566786,2.89638276307112,3.67999490025482,6.07216052512342,11.9824901743638,9.48690667071656,4.17717711348349,0.425820255624806,0,0,0,0,0,0,0.188605079755898,0.295301892880773,0.307435147943927,0,0,0,0.632073515871632,0,0,0,0.540183282093931,0.258717367565509,0,0.709360934569094,1.78368817602071,0.987294123612726,1.2178597964584,0,0,0.220528398054962,0,0,0,0,0,0,7.04616147639937,0,0,0,0,0,0,0,0,0,0,0.949007980743406,0.609958401380546,0.540026704109006,0.418176592028937,0.655087691238533,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8130515932779,12.4287813856938,13.1765968091061,8.93636548187176,6.16574267793578,4.5323633843382,2.70009000092722,4.5032120322422,7.70342095273148,3.62432218226274,1.45302286617847,3.19219898720825,1.19513524027894,0.486213434136588,2.93458427679175,1.47074806760011,1.33348036680969,2.06035057238894,1.92551525755089,2.27427490587418,1.2673964994512,2.07488975524684,1.96647165686753,1.28050304809739,1.03383844120104,1.42888107384922,0.811190281613988,0.964546102318525,1.64834360321323,1.76638704161277,2.05721551431249,1.06485483695602,1.1921809497366,1.45346416632329,1.88218760830661,1.52306294205018,0.914639864363863,0.789209134313529,1.22223702461276,1.68342681497322,1.30498519936592,0.591026894253381,1.63692417267876,1.39443157067369,0.385813221962283,2.99772693525535,0.935726433781634,1.07435527024149,0.382576664137687,0.441182838239031,0.927471342481686
|short_description=p2@Gng3
|short_description=p2@Gng3
}}
}}

Latest revision as of 04:43, 26 September 2015

Short description:p2@Gng3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Gng3_5end
Coexpression cluster:MCL_coexpression_mm9:87
Association with transcript: 84bp_to_ENSMUST00000096259, NM_010316, uc008gnh.1_5end
EntrezGene:Gng3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Gng3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C215.48
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C359.08
Mouse Granule cells, donor2.CNhs12357.11731-123E331.21
Mouse Granule cells, donor3.CNhs12108.11636-122C762.75
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.00
Mouse Microglia, donor2.CNhs12634.11736-123E85.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D522.50
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F514.18
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D929.02
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F160.27
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D584.15
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D224.50
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F221.47
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D614.71
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D347.35
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F325.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D721.04
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D473.46
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F438.97
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D854.70
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E419.26
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E530.95
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I628.11
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D643.90
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F660.65
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E145.30
Mouse Schwann, donor1.CNhs12507.11728-123D92.65
Mouse Schwann, donor2.CNhs12573.11746-123F94.99
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I23.35
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.30
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F15.28
cortex, adult.CNhs10473.12-14D57.13
cortex, neonate N30.CNhs11107.1392-42F23.32
diencephalon, adult.CNhs10482.20-12F24.36
diencephalon, neonate N30.CNhs11201.1388-42B25.35
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E21.84
eyeball, embryo E15.CNhs10593.426-16C93.78
eyeball, embryo E17.CNhs11023.1261-18D41.36
eyeball, neonate N00.CNhs11207.633-15C61.50
eyeball, neonate N01.CNhs11140.1532-43E72.56
eyeball, neonate N02.CNhs11205.1551-44G81.31
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E85.68
hippocampus, neonate N00.CNhs11228.627-43G16.07
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C28.03
medulla oblongata, neonate N30.CNhs11200.1396-42A34.92
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E111.67
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E218.35
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E320.25
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.68
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.07
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D511.98
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D69.49
olfactory brain, adult.CNhs10489.18-22I94.18
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F61.78
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C97.05
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A115.81
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A212.43
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A313.18
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.94
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.70
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I81.45
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B12.93
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.88
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I53.00
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system2.69e-4575
central nervous system1.03e-4373
ectoderm-derived structure1.22e-3995
ectoderm1.22e-3995
presumptive ectoderm1.22e-3995
neurectoderm5.11e-3364
neural plate5.11e-3364
presumptive neural plate5.11e-3364
regional part of nervous system3.86e-3054
neural tube7.10e-2852
neural rod7.10e-2852
future spinal cord7.10e-2852
neural keel7.10e-2852
gray matter2.99e-2734
ecto-epithelium1.35e-2673
brain2.07e-2247
future brain2.07e-2247
regional part of brain1.04e-2146
brain grey matter1.19e-2129
regional part of telencephalon1.19e-2129
telencephalon1.19e-2129
pre-chordal neural plate4.59e-2149
anterior neural tube5.47e-1940
regional part of forebrain2.35e-1839
forebrain2.35e-1839
future forebrain2.35e-1839
structure with developmental contribution from neural crest4.47e-1892
cerebral cortex2.84e-1421
cerebral hemisphere2.84e-1421
pallium2.84e-1421
regional part of cerebral cortex8.81e-1117
posterior neural tube1.70e-0912
chordal neural plate1.70e-0912
peripheral nervous system4.56e-0911
occipital lobe1.00e-0810
visual cortex1.00e-0810
neocortex1.00e-0810
basal ganglion1.14e-088
nuclear complex of neuraxis1.14e-088
aggregate regional part of brain1.14e-088
collection of basal ganglia1.14e-088
cerebral subcortex1.14e-088
autonomic nervous system6.45e-089
spinal cord1.31e-076
dorsal region element1.31e-076
dorsum1.31e-076
regional part of spinal cord6.94e-075
gray matter of spinal cord6.94e-075
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